Information report for AT5G35620
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0005634 — located in — nucleus
- GO:0005515 — enables — protein binding
- GO:0005845 — part of — mRNA cap binding complex
- GO:0006413 — acts upstream of or within — translational initiation
- GO:0005737 — located in — cytoplasm
- GO:0050687 — involved in — negative regulation of defense response to virus
- GO:0009536 — located in — plastid
- GO:0009615 — acts upstream of or within — response to virus
- GO:0000340 — enables — RNA 7-methylguanosine cap binding
- GO:0003743 — enables — translation initiation factor activity
- GO:0016281 — part of — eukaryotic translation initiation factor 4F complex
Functional Keywords
Literature and News
- The plant translational apparatus. DOI: 10.1007/BF00039380 ; PMID: 8980477
- High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. DOI: 10.1111/j.1365-313X.2004.02281.x ; PMID: 15610358
- Coordinated and selective recruitment of eIF4E and eIF4G factors for potyvirus infection in Arabidopsis thaliana. DOI: 10.1016/j.febslet.2007.02.007 ; PMID: 17316629
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Translation initiation factor (iso) 4E interacts with BTF3, the beta subunit of the nascent polypeptide-associated complex. DOI: 10.1016/j.gene.2004.11.030 ; PMID: 15716105
- Deletion of the eIFiso4G subunit of the Arabidopsis eIFiso4F translation initiation complex impairs health and viability. DOI: 10.1007/s11103-010-9670-z ; PMID: 20694742
- Translation initiation factor AteIF(iso)4E is involved in selective mRNA translation in Arabidopsis thaliana seedlings. DOI: 10.1371/journal.pone.0031606 ; PMID: 22363683
- The TPLATE adaptor complex drives clathrin-mediated endocytosis in plants. DOI: 10.1016/j.cell.2014.01.039 ; PMID: 24529374
- Five eIF4E isoforms from Arabidopsis thaliana are characterized by distinct features of cap analogs binding. DOI: 10.1016/j.bbrc.2014.11.032 ; PMID: 25446076
- Discovery and characterization of conserved binding of eIF4E 1 (CBE1), a eukaryotic translation initiation factor 4E-binding plant protein. DOI: 10.1074/jbc.RA118.003945 ; PMID: 30213859
- Arabidopsis translation initiation factors eIFiso4G1/2 link repression of mRNA cap-binding complex eIFiso4F assembly with RNA-binding protein SOAR1-mediated ABA signaling. DOI: 10.1111/nph.15880 ; PMID: 31050354
- eIFiso4G Augments the Synthesis of Specific Plant Proteins Involved in Normal Chloroplast Function. DOI: 10.1104/pp.19.00557 ; PMID: 31308150
- Viral silencing suppressors and cellular proteins partner with plant RRP6-like exoribonucleases. DOI: 10.1007/s11262-020-01775-z ; PMID: 32519287
Gene Resources
- UniProt: A0A178UEE3
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A178UEE3
- EnsemblPlants: AT5G35620.1, AT5G35620.3
- Gramene: AT5G35620.1, AT5G35620.3
- KEGG: ath:AT5G35620
- Orthologous matrix: EEFWAIV
- ExpressionAtlas: AT5G35620
- InterPro: IPR001040, IPR019770, IPR023398
- PANTHER: PTHR11960, PTHR11960:SF67
- SUPFAM: SSF55418
- PROSITE: PS00813
- Gene3D: 3.30.760.10
- OrthoDB: A0A178UEE3
- SWISS-MODEL: A0A178UEE3
Sequences
cDNA Sequence
- >AT5G35620.1
GAAATAGCCCTTTTCACTTCTTAAACCATTCCAAAATACATCTCAAAAACAATCTCTCTGTCCCTCTCTCGTAACCAAAAGCCGTCTCAGAAGAAAACTCAACTGCGAAGAATATGGCGACCGATGATGTGAACGAGCCTCTCCCGGCGGCGGCGGAATTACCGGCGACAGAGGCGGAGAAACAACCACACAAGCTCGAAAGAAAGTGGAGTTTCTGGTTCGATAACCAATCAAAGAAAGGCGCCGCCTGGGGAGCTTCTCTTCGTAAAGCCTATACTTTCGACACCGTCGAAGATTTTTGGGGATTGCACGAGACTATATTTCAGACTAGCAAATTGACAGCGAATGCTGAAATTCACTTGTTCAAAGCTGGTGTTGAGCCAAAGTGGGAAGATCCAGAGTGTGCTAATGGAGGAAAGTGGACTTGGGTTGTTACTGCTAATAGGAAGGAAGCTTTAGACAAAGGCTGGCTTGAAACTTTGATGGCTTTGATTGGAGAGCAATTTGATGAAGCAGATGAGATTTGTGGTGTGGTTGCTAGTGTCCGTCCACAGTCGAAGCAAGACAAGCTCTCCTTGTGGACTAGGACGAAGTCTAATGAAGCTGTTCTGATGGGTATTGGGAAGAAGTGGAAGGAGATACTTGATGTCACCGACAAGATAACTTTCAATAACCATGATGATTCCAGAAGAAGCCGGTTCACTGTCTGAAGAAACGAGTGTGAAGCCAGAGGAAGATGCAATATGGCTTTTTTTGTGATACTGTTTGGTCGGTTTACTCAAATAGCTGAGACATTTAGGGACATTCACTTTGAGGTGTAAACTCTACAAAGTTTTCTGTTTCATTAAAATGATTTTTTGTTATAAATTAAGTTGAGTTATATAAATCTCTTTCGAAACCACCACTTGTTAGACAAATACAGAGATAATATACTCTTATTAGCAACACCCTAATGCTTCTCTTTTGTATTTTGTTGGATCACATAGTGTTAGTACATGTCTATCGCATTTGTAATTATCACTATATGAATTTACA - >AT5G35620.3
GAAATAGCCCTTTTCACTTCTTAAACCATTCCAAAATACATCTCAAAAACAATCTCTCTGTCCCTCTCTCGTAACCAAAAGCCGTCTCAGAAGAAAACTCAACTGCGAAGAATATGGCGACCGATGATGTGAACGAGCCTCTCCCGGCGGCGGCGGAATTACCGGCGACAGAGGCGGAGAAACAACCACACAAGCTCGAAAGAAAGTGGAGTTTCTGGTTCGATAACCAATCAAAGAAAGGCGCCGCCTGGGGAGCTTCTCTTCGTAAAGCCTATACTTTCGACACCGTCGAAGATTTTTGGGGATTGCACGAGACTATATTTCAGACTAGCAAATTGACAGCGAATGCTGAAATTCACTTGTTCAAAGCTGGTGTTGAGCCAAAGTGGGAAGATCCAGAGTGTGCTAATGGAGGAAAGTGGACTTGGGTTGTTACTGCTAATAGGAAGGAAGCTTTAGACAAAGGCTGGCTTGAAACTTTGATGGCTTTGATTGGAGAGCAATTTGATGAAGCAGATGAGATTTGTGGTGTGGTTGCTAGTGTCCGTCCACAGTCGAAGCAAGACAAGCTCTCCTTGTGGACTAGGACGAAGTCTAATGAAGCTGTTCTGATGGGTATTGGGAAGAAGTGGAAGGAGATACTTGATGTCACCGACAAGATAACTTTCAATAACCATGATGATTCCAGAAGAAGCCGGTTCACTGTCTGAAGAAACGAGTGTGAAGCCAGAGGAAGATGCAATATGGCTTTTTTTGTGATACTGTTTGGTCGGTTTACTCAAATAGCTGAGACATTTAGGGACATTCACTTTGAGGTGTAAACTCTACAAAGTTTTCTGTTTCATTAAAATGATTTTTTGTTATAAATTAAGTTGAGTTATATAAATCTCTTTCGAAACCACCACTTGTTAGACAAATACAGAGATAATATACTCTTATTAGCAACACCCTAATGCTTCTCTTTTGTATTTTGTTGGATCACATAGTGTTAGTACATGTCTATCGCATTTGTAATTATCACTATATGAATTTACA - >AT5G35620.2
GAAATAGCCCTTTTCACTTCTTAAACCATTCCAAAATACATCTCAAAAACAATCTCTCTGTCCCTCTCTCGTAACCAAAAGCCGTCTCAGAAGAAAACTCAACTGCGAAGAATATGGCGACCGATGATGTGAACGAGCCTCTCCCGGCGGCGGCGGAATTACCGGCGACAGAGGCGGAGAAACAACCACACAAGCTCGAAAGAAAGTGGAGTTTCTGGTTCGATAACCAATCAAAGAAAGGCGCCGCCTGGGGAGCTTCTCTTCGTAAAGCCTATACTTTCGACACCGTCGAAGATTTTTGGGGATTGCACGAGACTATATTTCAGACTAGCAAATTGACAGCGAATGCTGAAATTCACTTGTTCAAAGCTGGTGTTGAGCCAAAGTGGGAAGATCCAGAGTGTGCTAATGGAGGAAAGTGGACTTGGGTTGTTACTGCTAATAGGAAGGAAGCTTTAGACAAAGGCTGGCTTGAAACTTTGATGGCTTTGATTGGAGAGCAATTTGATGAAGCAGATGAGATTTGTGGTGTGGTTGCTAGTGTCCGTCCACAGTCGAAGCAAGACAAGCTCTCCTTGTGGACTAGGACGAAGTCTAATGAAGCTGTTCTGATGGGTATTGGGAAGAAGTGGAAGGAGATACTTGATGTCACCGACAAGATAACTTTCAATAACCATGATGATTCCAGAAGAAGCCGGTTCACTGTCTGAAGAAACGAGTGTGAAGCCAGAGGAAGATGCAATATGGCTTTTTTTGTGATACTGTTTGGTCGGTTTACTCAAATAGCTGAGACATTTAGGGACATTCACTTTGAGGTGTAAACTCTACAAAGTTTTCTGTTTCATTAAAATGATTTTTTGTTATAAATTAAGTTGAGTTATATAAATCTCTTTCGAAACCACCACTTGTTAGACAAATACAGAGATAATATACTCTTATTAGCAACACCCTAATGCTTCTCTTTTGTATTTTGTTGGATCACATAGTGTTAGTACATGTCTATCGCATTTGTAATTATCACTATATGAATTTACA
CDS Sequence
Protein Sequence