Gene Details:
- Gene ID: AT5G35190
- Gene Symbol: EXT13
- Gene Name: extensin 13
- Description: proline-rich extensin-like family protein;(source:Araport11)
- TAIR Accession: locus:2182427
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000256 — root hair cell — célula del pelo de la raíz (Spanish, exact), 根毛細胞 (Japanese, exact)
- PO:0000262 — trichoblast — tricoblasto (Spanish, exact), 根毛形成細胞、トリコブラスト (Japanese, exact), hair cell (related)
Gene Ontology:
- GO:0009664 — involved in — plant-type cell wall organization
- GO:0005199 — enables — structural constituent of cell wall
- GO:0005575 — is active in — cellular_component
Function-related keywords:
Literature:
- Detoxification and transcriptome response in Arabidopsis seedlings exposed to the allelochemical benzoxazolin-2(3H)-one. DOI: 10.1074/jbc.M500694200 ; PMID: 15824099
- Gene expression programs during shoot, root, and callus development in Arabidopsis tissue culture. DOI: 10.1104/pp.106.081240 ; PMID: 16648215
- PIP5K9, an Arabidopsis phosphatidylinositol monophosphate kinase, interacts with a cytosolic invertase to negatively regulate sugar-mediated root growth. DOI: 10.1105/tpc.106.045658 ; PMID: 17220200
- Integration of Arabidopsis thaliana stress-related transcript profiles, promoter structures, and cell-specific expression. DOI: 10.1186/gb-2007-8-4-r49 ; PMID: 17408486
- O-glycosylated cell wall proteins are essential in root hair growth. DOI: 10.1126/science.1206657 ; PMID: 21680836
- A gene regulatory network for root epidermis cell differentiation in Arabidopsis. DOI: 10.1371/journal.pgen.1002446 ; PMID: 22253603
- Self-rescue of an EXTENSIN mutant reveals alternative gene expression programs and candidate proteins for new cell wall assembly in Arabidopsis. DOI: 10.1111/tpj.12204 ; PMID: 23578334
Sequences:
cDNA Sequence
- >AT5G35190.1
ATGGAGCGAGTGCATTGCATGGTTTATGTCGTGGTCTTAAGTGCCATTGCAGCTACAGTGACAGCATACCCTTACTCATCCCATCAAACACCACAATACAATTCTCCAGTCCACAAACACGAATCATCTTATTCACCTAAAAAGTATTCCCCATACTACTCGGCATCACCACTACCTCCACTACAATATAGAAGACAAGGCCCTAAGTACACGCCACATCCAAAACCGTATCTTTTCAACTCTCCACCACCACCTTATTACTCTCCTTCTCCAAAGGAAGACTACAAGTCTCCACCACCACCATATGTCTACAACTCTCCACCACCACCGTATTACTCCCCTTCTCCTAAAGTAGACTACAAATCTCCTCCACCACCATACGTCTACAACTCTCCACCACCACCTTATTACTCTCCTTCTCCAAAGGTAGAATACAAGTCTCCACCACCACCATATGTCTACAACTCTCCACCACCACCTTATTACTCTCTTTCTCCTAAAGTAGACTACAAGTCTCCACCACCACCATACGTCTACAACTCTCCACCACCACCTTATTACTCTCCTTCTCCAAAGGTAGACTACAAGTTTTCACCACCACCATACGTCTACAACTCTCCATCACCACCATATTACTCTCCTTCTCCTAAAGTAGACTACAAGTCTCCACCACCACCATACGTCTACAACTCTCCACCACCACCTTATTTCTCTCCTTCTCCAAAGGTAGACTATAAATCTCCTCCACCACCATATGTCTACAGCTCCCCACCACCTCCACCATACTATTCTCCTTCTCCAGAAGTCAGCTACAAGTCTCCACCACCTCCACCATACTATTCTCCTTCTCTAGAAGTCAGCTACAAGTCTCCACCACCACTTTTCGTCTACAACTTTCCACCACCTCCACCATTCTATTCTCCTTCTCCAAAAGTCAGCTACAAGTCTCCACCAGCACCTTATGTCTCAAAGACACCCAACTATTGAGTTTGAATTGTTTCATAATCCATAAGAATGATTGAAATAATTTGTTTTTATGATTCTGTCCATTTATTCTTGTAATATTGTCCCTTGATTCTTTTGATTTTGTTCCTTGTTCAACTATTTGTTAAGCTTTTTATGTAACCAATAAATTTTGGTTATTTCTGACATGCAATTGTTTATTTAATATTTGTTTGAATTGGCTAAAAATTTGTAATATGTTCGTTCTGCTATCAGATGATAATTTTTCTCTTTTAGGATAT - >AT5G35190.2
ATGGAGCGAGTGCATTGCATGGTTTATGTCGTGGTCTTAAGTGCCATTGCAGCTACAGTGACAGCATACCCTTACTCATCCCATCAAACACCACAATACAATTCTCCAGTCCACAAACACGAATCATCTTATTCACCTAAAAAGTATTCCCCATACTACTCGGCATCACCACTACCTCCACTACAATATAGAAGACAAGGCCCTAAGTACACGCCACATCCAAAACCGTATCTTTTCAACTCTCCACCACCACCTTATTACTCTCCTTCTCCAAAGGAAGACTACAAGTCTCCACCACCACCATATGTCTACAACTCTCCACCACCACCGTATTACTCCCCTTCTCCTAAAGTAGACTACAAATCTCCTCCACCACCATACGTCTACAACTCTCCACCACCACCTTATTACTCTCCTTCTCCAAAGGTAGAATACAAGTCTCCACCACCACCATATGTCTACAACTCTCCACCACCACCTTATTACTCTCTTTCTCCTAAAGTAGACTACAAGTCTCCACCACCACCATACGTCTACAACTCTCCACCACCACCTTATTACTCTCCTTCTCCAAAGGTAGACTACAAGTTTTCACCACCACCATACGTCTACAACTCTCCATCACCACCATATTACTCTCCTTCTCCTAAAGTAGACTACAAGTCTCCACCACCACCATACGTCTACAACTCTCCACCACCACCTTATTTCTCTCCTTCTCCAAAGGTAGACTATAAATCTCCTCCACCACCATATGTCTACAGCTCCCCACCACCTCCACCATACTATTCTCCTTCTCCAGAAGTCAGCTACAAGTCTCCACCACCTCCACCATACTATTCTCCTTCTCTAGAAGTCAGCTACAAGTCTCCACCACCACTTTTCGTCTACAACTTTCCACCACCTCCACCATTCTATTCTCCTTCTCCAAAAGTCAGCTACAAGTCTCCACCAGCACCTTATGTCTCAAAGACACCCAACTATTGAGTTTGAATTGTTTCATAATCCATAAGAATGATTGAAATAATTTGTTTTTATGATTCTGTCCATTTATTCTTGTAATATTGTCCCTTGATTCTTTTGATTTTGTTCCTTGTTCAACTATTTGTTAAGCTTTTTATGTAACCAATAAATTTTGGTTATTTCTGACATGCAATTGTTTATTTAATATTTGTTTGAATTGGCTAAAAATTTGTAATATGTTCGTTCTGCTATCAGATGATAATTTTTCTCTTTTAGGATAT
CDS Sequence
Protein Sequence