Information report for AT5G34940
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- GO:0005576 — located in — extracellular region
- GO:0004566 — enables — beta-glucuronidase activity
- GO:0009414 — acts upstream of or within — response to water deprivation
- GO:0016020 — located in — membrane
- GO:0016798 — enables — hydrolase activity, acting on glycosyl bonds
Functional Keywords
- root , root , vascular leaf , flower , stem
Literature and News
- Characterization of Arabidopsis AtUGT85A and AtGUS gene families and their expression in rapidly dividing tissues. DOI: 10.1016/j.ygeno.2007.03.014 ; PMID: 17498920
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers. DOI: 10.1186/1471-2229-8-94 ; PMID: 18796151
- Heterosis manifestation during early Arabidopsis seedling development is characterized by intermediate gene expression and enhanced metabolic activity in the hybrids. DOI: 10.1111/j.1365-313X.2012.05021.x ; PMID: 22487254
- A sub-proteome of Arabidopsis thaliana mature stems trapped on Concanavalin A is enriched in cell wall glycoside hydrolases. DOI: 10.1093/jxb/erm082 ; PMID: 17526915
- A sub-proteome of Arabidopsis thaliana mature stems trapped on Concanavalin A is enriched in cell wall glycoside hydrolases. DOI: 10.1093/jxb/erm082 ; PMID: 17526915
- A sub-proteome of Arabidopsis thaliana mature stems trapped on Concanavalin A is enriched in cell wall glycoside hydrolases. DOI: 10.1093/jxb/erm082 ; PMID: 17526915
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: F4JWV6
- EMBL: CP002688
- AlphaFoldDB: F4JWV6
- EnsemblPlants: AT5G34940.3
- Gramene: AT5G34940.3
- ExpressionAtlas: AT5G34940
- InterPro: IPR005199, IPR017853
- PANTHER: PTHR14363, PTHR14363:SF17
- SUPFAM: SSF51445
- Gene3D: 3.20.20.80
- SWISS-MODEL: F4JWV6
Sequences
cDNA Sequence
- >AT5G34940.3
ATGGCTTATCGTCAAATTTTGGCCATAGTTTTGTTTCTTTGTGTGTTTCAATTCTTGGACTGCACTGTTAGCTCCGCCGTAGAAGAGAATGGGACTGTGTTTGTGTACGGAAGAGCCGCCGTTGGAACAATAGATGAAGACTTCATTTGCGCCACCTTAGACTGGTGGCCACCGGAGAAATGTGACTACGGCAGTTGTAGTTGGGACCATGCTTCAATTCTCAATCTGGATTTGACCATTGTTGTTCCAATTTCCAAAAACACAGCATTTGCTCCGTTGAAAATAAGAATAGGAGGAACATTACAAGACATAGTGATATATGAGACACCAGATTCGAAGCAACCATGTCTTCCTTTTACCAAAAACTCTTCAATTCTTTTTGGTTACACACAAGGATGTCTACCTATGCGTCGATGGGACGAGCTCAATGCCTTCTTTCGCAAAACCGGAACTAAAGTCATCTTCGGGCTGAATGCACTTTCTGGACGTTCCATAAAATCTAACGGTGAAGCCATAGGAGCCTGGAATTACACCAATGCTGAATCGTTCATCCGGTTTACAGCAGAGAACAATTACACCATCGACGGGTGGGAGCTCGGCAATGAGCTGTGTGGAAGTGGTGTTGGTGCACGAGTTGGTGCAAATCAATATGCTATAGACACCATAAATCTGCGAAACATTGTGAACCGGGTTTACAAGAATGTGAGTCCCATGCCGTTGGTGATAGGTCCGGGTGGCTTCTTTGAAGTTGATTGGTTCACAGAATACCTGAACAAAGCAGAAAACTCTCTCAATGCTACTACTCGACATATCTACGATCTCGGTCCAGGAGTCGATGAACATCTGATAGAAAAGATTCTAAACCCTTCATATCTGGACCAAGAGGCAAAAAGTTTTCGCAGTCTCAAGAACATAATCAAAAACTCCTCAACAAAGGCTGTGGCATGGGTTGGTGAGTCCGGTGGTGCCTACAACAGTGGGCGGAATCTTGTCTCTAATGCTTTCGTGTATAGTTTCTGGTACCTGGACCAGCTTGGTATGGCATCGCTTTATGATACAAAAACATACTGTAGACAGTCTCTGATCGGAGGAAACTATGGGCTGCTAAATACTACTAACTTCACACCAAATCCAGACTATTACAGGTAACATCAGATGAATCTATTATGTCACCAGGAGAAATGGTTAAAAAGACAAGCAATAAAAGGAGTATATAACCCTAACTACAAGTCATGCTACTTGTTAACATGCAGTGCTCTGATCTGGCGACAACTTATGGGAAGAAAGGCATTGTTCACAACCTTTTCCGGAACCAAAAAGATACGTTCGTACACCCATTGTGCAAGACAATCGGTAAGTCGAGTTTCCATACAAGTAACTCAAATAGCATTATACTCAGATGAATTCCGATCTAACTTTTAAAGTTTCATCATGCAGAAAGGGATCACAGTTTTACTGATGAACCTTGACAATACTACAACGGTTGTAGCGAAAGTAGAGTTAAATAACAGTTTCAGTCTGAGACATACAAAGCACATGAAGTCTTATAAAAGAGCAAGTTCCCAACTTTTTGGGGGTCCTAATGGAGTAATCCAAAGAGAAGAGTACCATTTGACAGCAAAGGATGGAAACCTACACAGTCAGACTATGCTACTCAACGGAAATGCTCTTCAGGTTAATTCGATGGGTGATTTACCTCCTATAGAGCCGATACATATAAATTCAACAGAGCCAATAACAATAGCTCCATATTCCATTGTGTTTGTGCATATGCGGAATGTTGTTGTACCTGCATGTGCTTAAGGTAGCTGCATATGGAACTTAAGACAGTTCCTTCATTCAGTTATTTGATTAGAGAAAAATAAAGAAGCGTACCTTTCTTTCAT - >AT5G34940.1
ATGGCTTATCGTCAAATTTTGGCCATAGTTTTGTTTCTTTGTGTGTTTCAATTCTTGGACTGCACTGTTAGCTCCGCCGTAGAAGAGAATGGGACTGTGTTTGTGTACGGAAGAGCCGCCGTTGGAACAATAGATGAAGACTTCATTTGCGCCACCTTAGACTGGTGGCCACCGGAGAAATGTGACTACGGCAGTTGTAGTTGGGACCATGCTTCAATTCTCAATCTGGATTTGACCATTGTTGTTCCAATTTCCAAAAACACAGCATTTGCTCCGTTGAAAATAAGAATAGGAGGAACATTACAAGACATAGTGATATATGAGACACCAGATTCGAAGCAACCATGTCTTCCTTTTACCAAAAACTCTTCAATTCTTTTTGGTTACACACAAGGATGTCTACCTATGCGTCGATGGGACGAGCTCAATGCCTTCTTTCGCAAAACCGGAACTAAAGTCATCTTCGGGCTGAATGCACTTTCTGGACGTTCCATAAAATCTAACGGTGAAGCCATAGGAGCCTGGAATTACACCAATGCTGAATCGTTCATCCGGTTTACAGCAGAGAACAATTACACCATCGACGGGTGGGAGCTCGGCAATGAGCTGTGTGGAAGTGGTGTTGGTGCACGAGTTGGTGCAAATCAATATGCTATAGACACCATAAATCTGCGAAACATTGTGAACCGGGTTTACAAGAATGTGAGTCCCATGCCGTTGGTGATAGGTCCGGGTGGCTTCTTTGAAGTTGATTGGTTCACAGAATACCTGAACAAAGCAGAAAACTCTCTCAATGCTACTACTCGACATATCTACGATCTCGGTCCAGGAGTCGATGAACATCTGATAGAAAAGATTCTAAACCCTTCATATCTGGACCAAGAGGCAAAAAGTTTTCGCAGTCTCAAGAACATAATCAAAAACTCCTCAACAAAGGCTGTGGCATGGGTTGGTGAGTCCGGTGGTGCCTACAACAGTGGGCGGAATCTTGTCTCTAATGCTTTCGTGTATAGTTTCTGGTACCTGGACCAGCTTGGTATGGCATCGCTTTATGATACAAAAACATACTGTAGACAGTCTCTGATCGGAGGAAACTATGGGCTGCTAAATACTACTAACTTCACACCAAATCCAGACTATTACAGGTAACATCAGATGAATCTATTATGTCACCAGGAGAAATGGTTAAAAAGACAAGCAATAAAAGGAGTATATAACCCTAACTACAAGTCATGCTACTTGTTAACATGCAGTGCTCTGATCTGGCGACAACTTATGGGAAGAAAGGCATTGTTCACAACCTTTTCCGGAACCAAAAAGATACGTTCGTACACCCATTGTGCAAGACAATCGGTAAGTCGAGTTTCCATACAAGTAACTCAAATAGCATTATACTCAGATGAATTCCGATCTAACTTTTAAAGTTTCATCATGCAGAAAGGGATCACAGTTTTACTGATGAACCTTGACAATACTACAACGGTTGTAGCGAAAGTAGAGTTAAATAACAGTTTCAGTCTGAGACATACAAAGCACATGAAGTCTTATAAAAGAGCAAGTTCCCAACTTTTTGGGGGTCCTAATGGAGTAATCCAAAGAGAAGAGTACCATTTGACAGCAAAGGATGGAAACCTACACAGTCAGACTATGCTACTCAACGGAAATGCTCTTCAGGTTAATTCGATGGGTGATTTACCTCCTATAGAGCCGATACATATAAATTCAACAGAGCCAATAACAATAGCTCCATATTCCATTGTGTTTGTGCATATGCGGAATGTTGTTGTACCTGCATGTGCTTAAGGTAGCTGCATATGGAACTTAAGACAGTTCCTTCATTCAGTTATTTGATTAGAGAAAAATAAAGAAGCGTACCTTTCTTTCAT - >AT5G34940.2
ATGGCTTATCGTCAAATTTTGGCCATAGTTTTGTTTCTTTGTGTGTTTCAATTCTTGGACTGCACTGTTAGCTCCGCCGTAGAAGAGAATGGGACTGTGTTTGTGTACGGAAGAGCCGCCGTTGGAACAATAGATGAAGACTTCATTTGCGCCACCTTAGACTGGTGGCCACCGGAGAAATGTGACTACGGCAGTTGTAGTTGGGACCATGCTTCAATTCTCAATCTGGATTTGACCATTGTTGTTCCAATTTCCAAAAACACAGCATTTGCTCCGTTGAAAATAAGAATAGGAGGAACATTACAAGACATAGTGATATATGAGACACCAGATTCGAAGCAACCATGTCTTCCTTTTACCAAAAACTCTTCAATTCTTTTTGGTTACACACAAGGATGTCTACCTATGCGTCGATGGGACGAGCTCAATGCCTTCTTTCGCAAAACCGGAACTAAAGTCATCTTCGGGCTGAATGCACTTTCTGGACGTTCCATAAAATCTAACGGTGAAGCCATAGGAGCCTGGAATTACACCAATGCTGAATCGTTCATCCGGTTTACAGCAGAGAACAATTACACCATCGACGGGTGGGAGCTCGGCAATGAGCTGTGTGGAAGTGGTGTTGGTGCACGAGTTGGTGCAAATCAATATGCTATAGACACCATAAATCTGCGAAACATTGTGAACCGGGTTTACAAGAATGTGAGTCCCATGCCGTTGGTGATAGGTCCGGGTGGCTTCTTTGAAGTTGATTGGTTCACAGAATACCTGAACAAAGCAGAAAACTCTCTCAATGCTACTACTCGACATATCTACGATCTCGGTCCAGGAGTCGATGAACATCTGATAGAAAAGATTCTAAACCCTTCATATCTGGACCAAGAGGCAAAAAGTTTTCGCAGTCTCAAGAACATAATCAAAAACTCCTCAACAAAGGCTGTGGCATGGGTTGGTGAGTCCGGTGGTGCCTACAACAGTGGGCGGAATCTTGTCTCTAATGCTTTCGTGTATAGTTTCTGGTACCTGGACCAGCTTGGTATGGCATCGCTTTATGATACAAAAACATACTGTAGACAGTCTCTGATCGGAGGAAACTATGGGCTGCTAAATACTACTAACTTCACACCAAATCCAGACTATTACAGGTAACATCAGATGAATCTATTATGTCACCAGGAGAAATGGTTAAAAAGACAAGCAATAAAAGGAGTATATAACCCTAACTACAAGTCATGCTACTTGTTAACATGCAGTGCTCTGATCTGGCGACAACTTATGGGAAGAAAGGCATTGTTCACAACCTTTTCCGGAACCAAAAAGATACGTTCGTACACCCATTGTGCAAGACAATCGGTAAGTCGAGTTTCCATACAAGTAACTCAAATAGCATTATACTCAGATGAATTCCGATCTAACTTTTAAAGTTTCATCATGCAGAAAGGGATCACAGTTTTACTGATGAACCTTGACAATACTACAACGGTTGTAGCGAAAGTAGAGTTAAATAACAGTTTCAGTCTGAGACATACAAAGCACATGAAGTCTTATAAAAGAGCAAGTTCCCAACTTTTTGGGGGTCCTAATGGAGTAATCCAAAGAGAAGAGTACCATTTGACAGCAAAGGATGGAAACCTACACAGTCAGACTATGCTACTCAACGGAAATGCTCTTCAGGTTAATTCGATGGGTGATTTACCTCCTATAGAGCCGATACATATAAATTCAACAGAGCCAATAACAATAGCTCCATATTCCATTGTGTTTGTGCATATGCGGAATGTTGTTGTACCTGCATGTGCTTAAGGTAGCTGCATATGGAACTTAAGACAGTTCCTTCATTCAGTTATTTGATTAGAGAAAAATAAAGAAGCGTACCTTTCTTTCAT - >AT5G34940.4
ATGGCTTATCGTCAAATTTTGGCCATAGTTTTGTTTCTTTGTGTGTTTCAATTCTTGGACTGCACTGTTAGCTCCGCCGTAGAAGAGAATGGGACTGTGTTTGTGTACGGAAGAGCCGCCGTTGGAACAATAGATGAAGACTTCATTTGCGCCACCTTAGACTGGTGGCCACCGGAGAAATGTGACTACGGCAGTTGTAGTTGGGACCATGCTTCAATTCTCAATCTGGATTTGACCATTGTTGTTCCAATTTCCAAAAACACAGCATTTGCTCCGTTGAAAATAAGAATAGGAGGAACATTACAAGACATAGTGATATATGAGACACCAGATTCGAAGCAACCATGTCTTCCTTTTACCAAAAACTCTTCAATTCTTTTTGGTTACACACAAGGATGTCTACCTATGCGTCGATGGGACGAGCTCAATGCCTTCTTTCGCAAAACCGGAACTAAAGTCATCTTCGGGCTGAATGCACTTTCTGGACGTTCCATAAAATCTAACGGTGAAGCCATAGGAGCCTGGAATTACACCAATGCTGAATCGTTCATCCGGTTTACAGCAGAGAACAATTACACCATCGACGGGTGGGAGCTCGGCAATGAGCTGTGTGGAAGTGGTGTTGGTGCACGAGTTGGTGCAAATCAATATGCTATAGACACCATAAATCTGCGAAACATTGTGAACCGGGTTTACAAGAATGTGAGTCCCATGCCGTTGGTGATAGGTCCGGGTGGCTTCTTTGAAGTTGATTGGTTCACAGAATACCTGAACAAAGCAGAAAACTCTCTCAATGCTACTACTCGACATATCTACGATCTCGGTCCAGGAGTCGATGAACATCTGATAGAAAAGATTCTAAACCCTTCATATCTGGACCAAGAGGCAAAAAGTTTTCGCAGTCTCAAGAACATAATCAAAAACTCCTCAACAAAGGCTGTGGCATGGGTTGGTGAGTCCGGTGGTGCCTACAACAGTGGGCGGAATCTTGTCTCTAATGCTTTCGTGTATAGTTTCTGGTACCTGGACCAGCTTGGTATGGCATCGCTTTATGATACAAAAACATACTGTAGACAGTCTCTGATCGGAGGAAACTATGGGCTGCTAAATACTACTAACTTCACACCAAATCCAGACTATTACAGGTAACATCAGATGAATCTATTATGTCACCAGGAGAAATGGTTAAAAAGACAAGCAATAAAAGGAGTATATAACCCTAACTACAAGTCATGCTACTTGTTAACATGCAGTGCTCTGATCTGGCGACAACTTATGGGAAGAAAGGCATTGTTCACAACCTTTTCCGGAACCAAAAAGATACGTTCGTACACCCATTGTGCAAGACAATCGGTAAGTCGAGTTTCCATACAAGTAACTCAAATAGCATTATACTCAGATGAATTCCGATCTAACTTTTAAAGTTTCATCATGCAGAAAGGGATCACAGTTTTACTGATGAACCTTGACAATACTACAACGGTTGTAGCGAAAGTAGAGTTAAATAACAGTTTCAGTCTGAGACATACAAAGCACATGAAGTCTTATAAAAGAGCAAGTTCCCAACTTTTTGGGGGTCCTAATGGAGTAATCCAAAGAGAAGAGTACCATTTGACAGCAAAGGATGGAAACCTACACAGTCAGACTATGCTACTCAACGGAAATGCTCTTCAGGTTAATTCGATGGGTGATTTACCTCCTATAGAGCCGATACATATAAATTCAACAGAGCCAATAACAATAGCTCCATATTCCATTGTGTTTGTGCATATGCGGAATGTTGTTGTACCTGCATGTGCTTAAGGTAGCTGCATATGGAACTTAAGACAGTTCCTTCATTCAGTTATTTGATTAGAGAAAAATAAAGAAGCGTACCTTTCTTTCAT
CDS Sequence
Protein Sequence