Information report for AT5G29000
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:1901698 — acts upstream of or within — response to nitrogen compound
- GO:0044248 — acts upstream of or within — cellular catabolic process
- GO:0044550 — acts upstream of or within — secondary metabolite biosynthetic process
- GO:0044281 — acts upstream of or within — small molecule metabolic process
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0005634 — located in — nucleus
- GO:0003677 — enables — DNA binding
- GO:1901565 — acts upstream of or within — organonitrogen compound catabolic process
- GO:0009908 — acts upstream of or within — flower development
- GO:0005515 — enables — protein binding
- GO:0010035 — acts upstream of or within — response to inorganic substance
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- When defense pathways collide. The response of Arabidopsis to a combination of drought and heat stress. DOI: 10.1104/pp.103.033431 ; PMID: 15047901
- Type III effectors orchestrate a complex interplay between transcriptional networks to modify basal defence responses during pathogenesis and resistance. DOI: 10.1111/j.1365-313X.2006.02672.x ; PMID: 16553893
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- A chemical genetic strategy identify the PHOSTIN, a synthetic molecule that triggers phosphate starvation responses in Arabidopsis thaliana. DOI: 10.1111/nph.13591 ; PMID: 26243630
- Arabidopsis PHL2 and PHR1 Act Redundantly as the Key Components of the Central Regulatory System Controlling Transcriptional Responses to Phosphate Starvation. DOI: 10.1104/pp.15.01336 ; PMID: 26586833
- Proline Accumulation Is Regulated by Transcription Factors Associated with Phosphate Starvation. DOI: 10.1104/pp.17.00791 ; PMID: 28765275
- Functional Characterization of Arabidopsis PHL4 in Plant Response to Phosphate Starvation. DOI: 10.3389/fpls.2018.01432 ; PMID: 30327661
- Plant-mediated effects of soil phosphorus on the root-associated fungal microbiota in Arabidopsis thaliana. DOI: 10.1111/nph.15538 ; PMID: 30317641
- Iron and Phosphate Deficiency Regulators Concertedly Control Coumarin Profiles in Arabidopsis thaliana Roots During Iron, Phosphate, and Combined Deficiencies. DOI: 10.3389/fpls.2019.00113 ; PMID: 30804973
- Nitrate-inducible NIGT1 proteins modulate phosphate uptake and starvation signalling via transcriptional regulation of SPX genes. DOI: 10.1111/tpj.14637 ; PMID: 31811679
- The Arabidopsis transcription factors AtPHL1 and AtHB23 act together promoting carbohydrate transport from pedicel-silique nodes to seeds. DOI: 10.1016/j.plantsci.2021.111133 ; PMID: 35067303
- PHOSPHATE RESPONSE 1 family members act distinctly to regulate transcriptional responses to phosphate starvation. DOI: 10.1093/plphys/kiac521 ; PMID: 36417239
- Elucidating the unknown transcriptional responses and PHR1-mediated biotic and abiotic stress tolerance during phosphorus limitation. DOI: 10.1093/jxb/erad009 ; PMID: 36629302
- Molecular mechanism of phosphorous signaling inducing anthocyanin accumulation in Arabidopsis. DOI: 10.1016/j.plaphy.2023.01.029 ; PMID: 36706691
- A complex tissue-specific interplay between the Arabidopsis transcription factors AtMYB68, AtHB23, and AtPHL1 modulates primary and lateral root development and adaptation to salinity. DOI: 10.1111/tpj.16273 ; PMID: 37165773
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Gene Resources
- UniProt: A0A178ULG0
- EMBL: LUHQ01000005
- AlphaFoldDB: A0A178ULG0
- EnsemblPlants: AT5G29000.1, AT5G29000.3
- Gramene: AT5G29000.1, AT5G29000.3
- Orthologous matrix: NWELPID
- ExpressionAtlas: AT5G29000
- InterPro: IPR001005, IPR006447, IPR009057
- PANTHER: PTHR31499, PTHR31499:SF80
- SUPFAM: SSF46689
- PROSITE: PS51294
- Gene3D: 1.10.10.60
- SWISS-MODEL: A0A178ULG0
Sequences
cDNA Sequence
- >AT5G29000.3
GCCCTGTGTTCTCTGAGTCAAGTAAGATTCTTTTCGACGATTCCATTTACTCTTTGATTAGGGTTTTATCATTCTCAATCAGGGTTTTAGTTTAAACATCGAATTAAGCACTGGATTAGCTGATTTTGTGTGATTTGATTTCAAAGTTCACAGCTTTTAGTTTCTCTGATCCTAATTTATGATTTGAAGTTTCTATCAAAAGGTCAGGAACTGATGAATAACCCTGTACCGTGTCAGTCGGTCTCTGGTGGCAATTCTGGTGGTTATTTGTTTCCTTCTTCCTCTGGATACTGCAATGTTTCAGCTGTCTTGCCTCATGGAAGGAATTTGCAAAACCAGCCACCTGTTTCCACCGTGCCTAGAGACAGATTGGCTATGCAGGATTGTCCTTTGATAGCTCAATCCTCGTTGATTAATCATCACCCTCAAGAGTTCATAGATCCACTTCATGAGTTCTTTGATTTCTCTGATCATGTTCCTGTTCAGAATCTACAAGCAGAGAGTAGTGGAGTAAGGGTGGACTCATCCGTGGAACTTCATAAGAAAAGTGAATGGCAAGATTGGGCAGATCAGCTGATTTCTGTTGACGATGGTTCTGAGCCAAATTGGTCTGAACTTCTTGGAGATTCAAGTTCCCACAATCCAAATTCAGAGATACCTACACCATTTTTGGATGTACCAAGGCTAGATATAACAGCTAACCAGCAGCAACAGATGGTTTCATCAGAGGACCAGCTCAGCGGCAGAAACTCATCATCTAGTGTAGCAACATCTAAACAACGTATGCGTTGGACACCAGAACTTCACGAGGCATTCGTTGAAGCTGTTAATCAGCTTGGTGGTAGTGAACGAGCCACCCCTAAGGCTGTTTTGAAGCTCTTGAATAACCCTGGCTTGACCATTTATCATGTAAAAAGCCATTTGCAGAAATATAGAACGGCAAGGTATAAACCGGAGACTTCGGAAGTTACAGGAGAACCTCAAGAGAAGAAGATGACATCTATTGAAGATATCAAATCTCTTGACATGAAAACGAGCGTTGAGATCACACAAGCTCTACGGTTACAAATGGAAGTGCAGAAACGTCTCCACGAGCAGCTCGAGATCCAACGGTCACTGCAGTTACAGATTGAAAAACAGGGCCGGTACCTACAGATGATGTTCGAGAAACAACAAAAGATACAAGACAACAAGAGCTCTTCTTCAGAAGCATCACCAAAGCAATGCAATGGTTCATTTGCAGAAGTTGAAGTTGGTCTTGAGACACTAACAGGGGACCAAAATGAATCTGCTTCAGCATCAAGGAAACGTGTCAGAGAAGATTAAAGCATGTTTAATTTGATCTCGTTTGACGAAACATGTTTATTGGGAATTAATTGTGGAAACCAACTCCAGTTTTGTTAAAAGAATCTGTTTCTTTCTTAGCTCTGTATTGTTCTAGTTTAGAAGCAGTTGATTTGGCCTTGCATGGCTGCAACACTAACTAAAGAGTAAAGACTAATTGTGTATATCTACATATACATTTTTGGGGACGATTTGTGTCGAAAAATCCTTTTTCAATTTTTGATATTGTATGTTTAGTCCCTACAAAATCAATCAGAC - >AT5G29000.1
GCCCTGTGTTCTCTGAGTCAAGTAAGATTCTTTTCGACGATTCCATTTACTCTTTGATTAGGGTTTTATCATTCTCAATCAGGGTTTTAGTTTAAACATCGAATTAAGCACTGGATTAGCTGATTTTGTGTGATTTGATTTCAAAGTTCACAGCTTTTAGTTTCTCTGATCCTAATTTATGATTTGAAGTTTCTATCAAAAGGTCAGGAACTGATGAATAACCCTGTACCGTGTCAGTCGGTCTCTGGTGGCAATTCTGGTGGTTATTTGTTTCCTTCTTCCTCTGGATACTGCAATGTTTCAGCTGTCTTGCCTCATGGAAGGAATTTGCAAAACCAGCCACCTGTTTCCACCGTGCCTAGAGACAGATTGGCTATGCAGGATTGTCCTTTGATAGCTCAATCCTCGTTGATTAATCATCACCCTCAAGAGTTCATAGATCCACTTCATGAGTTCTTTGATTTCTCTGATCATGTTCCTGTTCAGAATCTACAAGCAGAGAGTAGTGGAGTAAGGGTGGACTCATCCGTGGAACTTCATAAGAAAAGTGAATGGCAAGATTGGGCAGATCAGCTGATTTCTGTTGACGATGGTTCTGAGCCAAATTGGTCTGAACTTCTTGGAGATTCAAGTTCCCACAATCCAAATTCAGAGATACCTACACCATTTTTGGATGTACCAAGGCTAGATATAACAGCTAACCAGCAGCAACAGATGGTTTCATCAGAGGACCAGCTCAGCGGCAGAAACTCATCATCTAGTGTAGCAACATCTAAACAACGTATGCGTTGGACACCAGAACTTCACGAGGCATTCGTTGAAGCTGTTAATCAGCTTGGTGGTAGTGAACGAGCCACCCCTAAGGCTGTTTTGAAGCTCTTGAATAACCCTGGCTTGACCATTTATCATGTAAAAAGCCATTTGCAGAAATATAGAACGGCAAGGTATAAACCGGAGACTTCGGAAGTTACAGGAGAACCTCAAGAGAAGAAGATGACATCTATTGAAGATATCAAATCTCTTGACATGAAAACGAGCGTTGAGATCACACAAGCTCTACGGTTACAAATGGAAGTGCAGAAACGTCTCCACGAGCAGCTCGAGATCCAACGGTCACTGCAGTTACAGATTGAAAAACAGGGCCGGTACCTACAGATGATGTTCGAGAAACAACAAAAGATACAAGACAACAAGAGCTCTTCTTCAGAAGCATCACCAAAGCAATGCAATGGTTCATTTGCAGAAGTTGAAGTTGGTCTTGAGACACTAACAGGGGACCAAAATGAATCTGCTTCAGCATCAAGGAAACGTGTCAGAGAAGATTAAAGCATGTTTAATTTGATCTCGTTTGACGAAACATGTTTATTGGGAATTAATTGTGGAAACCAACTCCAGTTTTGTTAAAAGAATCTGTTTCTTTCTTAGCTCTGTATTGTTCTAGTTTAGAAGCAGTTGATTTGGCCTTGCATGGCTGCAACACTAACTAAAGAGTAAAGACTAATTGTGTATATCTACATATACATTTTTGGGGACGATTTGTGTCGAAAAATCCTTTTTCAATTTTTGATATTGTATGTTTAGTCCCTACAAAATCAATCAGAC - >AT5G29000.2
GCCCTGTGTTCTCTGAGTCAAGTAAGATTCTTTTCGACGATTCCATTTACTCTTTGATTAGGGTTTTATCATTCTCAATCAGGGTTTTAGTTTAAACATCGAATTAAGCACTGGATTAGCTGATTTTGTGTGATTTGATTTCAAAGTTCACAGCTTTTAGTTTCTCTGATCCTAATTTATGATTTGAAGTTTCTATCAAAAGGTCAGGAACTGATGAATAACCCTGTACCGTGTCAGTCGGTCTCTGGTGGCAATTCTGGTGGTTATTTGTTTCCTTCTTCCTCTGGATACTGCAATGTTTCAGCTGTCTTGCCTCATGGAAGGAATTTGCAAAACCAGCCACCTGTTTCCACCGTGCCTAGAGACAGATTGGCTATGCAGGATTGTCCTTTGATAGCTCAATCCTCGTTGATTAATCATCACCCTCAAGAGTTCATAGATCCACTTCATGAGTTCTTTGATTTCTCTGATCATGTTCCTGTTCAGAATCTACAAGCAGAGAGTAGTGGAGTAAGGGTGGACTCATCCGTGGAACTTCATAAGAAAAGTGAATGGCAAGATTGGGCAGATCAGCTGATTTCTGTTGACGATGGTTCTGAGCCAAATTGGTCTGAACTTCTTGGAGATTCAAGTTCCCACAATCCAAATTCAGAGATACCTACACCATTTTTGGATGTACCAAGGCTAGATATAACAGCTAACCAGCAGCAACAGATGGTTTCATCAGAGGACCAGCTCAGCGGCAGAAACTCATCATCTAGTGTAGCAACATCTAAACAACGTATGCGTTGGACACCAGAACTTCACGAGGCATTCGTTGAAGCTGTTAATCAGCTTGGTGGTAGTGAACGAGCCACCCCTAAGGCTGTTTTGAAGCTCTTGAATAACCCTGGCTTGACCATTTATCATGTAAAAAGCCATTTGCAGAAATATAGAACGGCAAGGTATAAACCGGAGACTTCGGAAGTTACAGGAGAACCTCAAGAGAAGAAGATGACATCTATTGAAGATATCAAATCTCTTGACATGAAAACGAGCGTTGAGATCACACAAGCTCTACGGTTACAAATGGAAGTGCAGAAACGTCTCCACGAGCAGCTCGAGATCCAACGGTCACTGCAGTTACAGATTGAAAAACAGGGCCGGTACCTACAGATGATGTTCGAGAAACAACAAAAGATACAAGACAACAAGAGCTCTTCTTCAGAAGCATCACCAAAGCAATGCAATGGTTCATTTGCAGAAGTTGAAGTTGGTCTTGAGACACTAACAGGGGACCAAAATGAATCTGCTTCAGCATCAAGGAAACGTGTCAGAGAAGATTAAAGCATGTTTAATTTGATCTCGTTTGACGAAACATGTTTATTGGGAATTAATTGTGGAAACCAACTCCAGTTTTGTTAAAAGAATCTGTTTCTTTCTTAGCTCTGTATTGTTCTAGTTTAGAAGCAGTTGATTTGGCCTTGCATGGCTGCAACACTAACTAAAGAGTAAAGACTAATTGTGTATATCTACATATACATTTTTGGGGACGATTTGTGTCGAAAAATCCTTTTTCAATTTTTGATATTGTATGTTTAGTCCCTACAAAATCAATCAGAC - >AT5G29000.4
GCCCTGTGTTCTCTGAGTCAAGTAAGATTCTTTTCGACGATTCCATTTACTCTTTGATTAGGGTTTTATCATTCTCAATCAGGGTTTTAGTTTAAACATCGAATTAAGCACTGGATTAGCTGATTTTGTGTGATTTGATTTCAAAGTTCACAGCTTTTAGTTTCTCTGATCCTAATTTATGATTTGAAGTTTCTATCAAAAGGTCAGGAACTGATGAATAACCCTGTACCGTGTCAGTCGGTCTCTGGTGGCAATTCTGGTGGTTATTTGTTTCCTTCTTCCTCTGGATACTGCAATGTTTCAGCTGTCTTGCCTCATGGAAGGAATTTGCAAAACCAGCCACCTGTTTCCACCGTGCCTAGAGACAGATTGGCTATGCAGGATTGTCCTTTGATAGCTCAATCCTCGTTGATTAATCATCACCCTCAAGAGTTCATAGATCCACTTCATGAGTTCTTTGATTTCTCTGATCATGTTCCTGTTCAGAATCTACAAGCAGAGAGTAGTGGAGTAAGGGTGGACTCATCCGTGGAACTTCATAAGAAAAGTGAATGGCAAGATTGGGCAGATCAGCTGATTTCTGTTGACGATGGTTCTGAGCCAAATTGGTCTGAACTTCTTGGAGATTCAAGTTCCCACAATCCAAATTCAGAGATACCTACACCATTTTTGGATGTACCAAGGCTAGATATAACAGCTAACCAGCAGCAACAGATGGTTTCATCAGAGGACCAGCTCAGCGGCAGAAACTCATCATCTAGTGTAGCAACATCTAAACAACGTATGCGTTGGACACCAGAACTTCACGAGGCATTCGTTGAAGCTGTTAATCAGCTTGGTGGTAGTGAACGAGCCACCCCTAAGGCTGTTTTGAAGCTCTTGAATAACCCTGGCTTGACCATTTATCATGTAAAAAGCCATTTGCAGAAATATAGAACGGCAAGGTATAAACCGGAGACTTCGGAAGTTACAGGAGAACCTCAAGAGAAGAAGATGACATCTATTGAAGATATCAAATCTCTTGACATGAAAACGAGCGTTGAGATCACACAAGCTCTACGGTTACAAATGGAAGTGCAGAAACGTCTCCACGAGCAGCTCGAGATCCAACGGTCACTGCAGTTACAGATTGAAAAACAGGGCCGGTACCTACAGATGATGTTCGAGAAACAACAAAAGATACAAGACAACAAGAGCTCTTCTTCAGAAGCATCACCAAAGCAATGCAATGGTTCATTTGCAGAAGTTGAAGTTGGTCTTGAGACACTAACAGGGGACCAAAATGAATCTGCTTCAGCATCAAGGAAACGTGTCAGAGAAGATTAAAGCATGTTTAATTTGATCTCGTTTGACGAAACATGTTTATTGGGAATTAATTGTGGAAACCAACTCCAGTTTTGTTAAAAGAATCTGTTTCTTTCTTAGCTCTGTATTGTTCTAGTTTAGAAGCAGTTGATTTGGCCTTGCATGGCTGCAACACTAACTAAAGAGTAAAGACTAATTGTGTATATCTACATATACATTTTTGGGGACGATTTGTGTCGAAAAATCCTTTTTCAATTTTTGATATTGTATGTTTAGTCCCTACAAAATCAATCAGAC
CDS Sequence
Protein Sequence