Information report for AT5G28840
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0009536 — located in — plastid
- GO:0005515 — enables — protein binding
- GO:0005829 — located in — cytosol
- GO:0010494 — located in — cytoplasmic stress granule
- GO:0019853 — acts upstream of or within — L-ascorbic acid biosynthetic process
- GO:0051287 — enables — NAD binding
- GO:0005794 — located in — Golgi apparatus
- GO:0047918 — enables — GDP-mannose 3,5-epimerase activity
Functional Keywords
Literature and News
- Methyl jasmonate stimulates the de novo biosynthesis of vitamin C in plant cell suspensions. DOI: 10.1093/jxb/eri246 ; PMID: 16061506
- Transcriptional profiling of imbibed Brassica napus seed. DOI: 10.1016/j.ygeno.2005.07.006 ; PMID: 16125897
- Proteomic investigation of the effect of salicylic acid on Arabidopsis seed germination and establishment of early defense mechanisms. DOI: 10.1104/pp.106.082057 ; PMID: 16679420
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- Species specific amino acid sequence-protein local structure relationships: An analysis in the light of a structural alphabet. DOI: 10.1016/j.jtbi.2011.01.047 ; PMID: 21333657
- Transient expression analysis revealed the importance of VTC2 expression level in light/dark regulation of ascorbate biosynthesis in Arabidopsis. DOI: 10.1080/09168451.2014.877831 ; PMID: 25036484
- Protein and metabolite composition of Arabidopsis stress granules. DOI: 10.1111/nph.15690 ; PMID: 30664249
- The Chlamydomonas genome reveals the evolution of key animal and plant functions. DOI: 10.1126/science.1143609 ; PMID: 17932292
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: Q0WWW3
- EMBL: AK226220
- AlphaFoldDB: Q0WWW3
- EnsemblPlants: AT5G28840.1, AT5G28840.2
- Gramene: AT5G28840.1, AT5G28840.2
- KEGG: ath:AT5G28840
- Orthologous matrix: PDMTYGW
- ExpressionAtlas: AT5G28840
- InterPro: IPR001509, IPR033890, IPR036291
- PANTHER: PTHR43574
- SUPFAM: SSF51735
- Gene3D: 3.40.50.720, 3.90.25.10
- OrthoDB: Q0WWW3
- SWISS-MODEL: Q0WWW3
- Conserved Domain Database: cd05273
Sequences
cDNA Sequence
- >AT5G28840.1
AGGATTTTATTAGTTATAAAATAAATTTAACAGAAAGAGGCACAAATACCAATAGGAGTTGGAAAACTAAAACAACGAGTGGTGTTGCTCTCTCCATCTTCCTCTTCATCTTCTTCTGTTCTCTCTCTATAAATACAAGTTTACTCTTCCTCTTCCTCAAATCTCTGACTCTTCTCTGCATTATCTCTTCGATCTCTCCAACTCTCCAAAACCTTCCTCAGAATGGGAACTACCAATGGAACAGACTATGGAGCATACACATACAAGGAGCTAGAAAGAGAGCAATATTGGCCATCTGAGAATCTCAAGATATCAATAACAGGAGCTGGAGGTTTCATTGCATCTCACATTGCTCGTCGTTTGAAGCACGAAGGTCATTACGTGATTGCTTCTGACTGGAAAAAGAATGAACACATGACTGAAGACATGTTCTGTGATGAGTTCCATCTTGTTGATCTTAGGGTTATGGAGAATTGTCTCAAAGTTACTGAAGGAGTTGATCATGTTTTTAACTTAGCTGCTGATATGGGTGGTATGGGTTTTATCCAGAGTAATCACTCTGTGATTATGTATAATAATACTATGATTAGTTTCAATATGATTGAGGCTGCTAGGATCAATGGGATTAAGAGGTTCTTTTATGCTTCGAGTGCTTGTATCTATCCAGAGTTTAAGCAGTTGGAGACTACTAATGTGAGCTTGAAGGAGTCAGATGCTTGGCCTGCAGAGCCTCAAGATGCTTATGGTTTGGAGAAGCTTGCTACGGAGGAGTTGTGTAAGCATTACAACAAAGATTTTGGTATTGAGTGTCGAATTGGAAGGTTCCATAACATTTATGGTCCTTTTGGAACATGGAAAGGTGGAAGGGAGAAGGCTCCAGCTGCTTTCTGTAGGAAGGCTCAGACTTCCACTGATAGGTTTGAGATGTGGGGAGATGGGCTTCAGACCCGTTCTTTTACCTTTATCGATGAGTGTGTTGAAGGTGTACTCAGGTTGACAAAATCAGATTTCCGTGAGCCGGTGAACATCGGAAGCGATGAGATGGTGAGCATGAATGAGATGGCTGAGATGGTTCTCAGCTTTGAGGAAAAGAAGCTTCCAATTCACCACATTCCTGGCCCGGAAGGTGTTCGTGGTCGTAACTCAGACAACAATCTGATCAAAGAAAAGCTTGGTTGGGCTCCTAATATGAGATTGAAGGAGGGGCTTAGAATAACCTACTTCTGGATAAAGGAACAGATCGAGAAAGAGAAAGCAAAGGGAAGCGATGTGTCGCTTTACGGGTCATCAAAGGTGGTTGGAACTCAAGCACCGGTTCAGCTAGGCTCACTCCGCGCGGCTGATGGAAAAGAGTGAAGTTCACCAAAGTATAAGTCAAGCTCAAATATGGCCTTTTAAGTTCAGCAAAATGTTTAGATATATTTTTAGGTAGCTTCCTATTAAAAAAGCAATAATAAGTGTTTTGGATTTTGGTTCCTTCTATTCTGCTAATCCTTGTTTATGTTTAGTTGAAAAAGTTTGCTTGCATTGTTAAGTCTGTTATCATATTATTGTGGTCCTTTCATTCACAGTATGTATGTTTATCATCATAGTCAAGTTGATGTCGTGGTCCTCTCACGGACCAGTACAAGTAAGTGGCTTGTGTTTTTTCTTGCATCTTATCATCTATTCACACATCTCTAGAGGTTAGGGATCACTCACGGTGACTCACCATTCTTTCTCTTCCATCCACTTCTTTATCCCATTCCTCGGTCAAAAATGTCACACGTAATAAATCATAAGGTTTTAAGTTTATATATTGCTTTTTTTATG - >AT5G28840.2
AGGATTTTATTAGTTATAAAATAAATTTAACAGAAAGAGGCACAAATACCAATAGGAGTTGGAAAACTAAAACAACGAGTGGTGTTGCTCTCTCCATCTTCCTCTTCATCTTCTTCTGTTCTCTCTCTATAAATACAAGTTTACTCTTCCTCTTCCTCAAATCTCTGACTCTTCTCTGCATTATCTCTTCGATCTCTCCAACTCTCCAAAACCTTCCTCAGAATGGGAACTACCAATGGAACAGACTATGGAGCATACACATACAAGGAGCTAGAAAGAGAGCAATATTGGCCATCTGAGAATCTCAAGATATCAATAACAGGAGCTGGAGGTTTCATTGCATCTCACATTGCTCGTCGTTTGAAGCACGAAGGTCATTACGTGATTGCTTCTGACTGGAAAAAGAATGAACACATGACTGAAGACATGTTCTGTGATGAGTTCCATCTTGTTGATCTTAGGGTTATGGAGAATTGTCTCAAAGTTACTGAAGGAGTTGATCATGTTTTTAACTTAGCTGCTGATATGGGTGGTATGGGTTTTATCCAGAGTAATCACTCTGTGATTATGTATAATAATACTATGATTAGTTTCAATATGATTGAGGCTGCTAGGATCAATGGGATTAAGAGGTTCTTTTATGCTTCGAGTGCTTGTATCTATCCAGAGTTTAAGCAGTTGGAGACTACTAATGTGAGCTTGAAGGAGTCAGATGCTTGGCCTGCAGAGCCTCAAGATGCTTATGGTTTGGAGAAGCTTGCTACGGAGGAGTTGTGTAAGCATTACAACAAAGATTTTGGTATTGAGTGTCGAATTGGAAGGTTCCATAACATTTATGGTCCTTTTGGAACATGGAAAGGTGGAAGGGAGAAGGCTCCAGCTGCTTTCTGTAGGAAGGCTCAGACTTCCACTGATAGGTTTGAGATGTGGGGAGATGGGCTTCAGACCCGTTCTTTTACCTTTATCGATGAGTGTGTTGAAGGTGTACTCAGGTTGACAAAATCAGATTTCCGTGAGCCGGTGAACATCGGAAGCGATGAGATGGTGAGCATGAATGAGATGGCTGAGATGGTTCTCAGCTTTGAGGAAAAGAAGCTTCCAATTCACCACATTCCTGGCCCGGAAGGTGTTCGTGGTCGTAACTCAGACAACAATCTGATCAAAGAAAAGCTTGGTTGGGCTCCTAATATGAGATTGAAGGAGGGGCTTAGAATAACCTACTTCTGGATAAAGGAACAGATCGAGAAAGAGAAAGCAAAGGGAAGCGATGTGTCGCTTTACGGGTCATCAAAGGTGGTTGGAACTCAAGCACCGGTTCAGCTAGGCTCACTCCGCGCGGCTGATGGAAAAGAGTGAAGTTCACCAAAGTATAAGTCAAGCTCAAATATGGCCTTTTAAGTTCAGCAAAATGTTTAGATATATTTTTAGGTAGCTTCCTATTAAAAAAGCAATAATAAGTGTTTTGGATTTTGGTTCCTTCTATTCTGCTAATCCTTGTTTATGTTTAGTTGAAAAAGTTTGCTTGCATTGTTAAGTCTGTTATCATATTATTGTGGTCCTTTCATTCACAGTATGTATGTTTATCATCATAGTCAAGTTGATGTCGTGGTCCTCTCACGGACCAGTACAAGTAAGTGGCTTGTGTTTTTTCTTGCATCTTATCATCTATTCACACATCTCTAGAGGTTAGGGATCACTCACGGTGACTCACCATTCTTTCTCTTCCATCCACTTCTTTATCCCATTCCTCGGTCAAAAATGTCACACGTAATAAATCATAAGGTTTTAAGTTTATATATTGCTTTTTTTATG
CDS Sequence
Protein Sequence