Information report for AT5G28640
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000017 — vascular leaf primordium — leaf primordium (exact), portion of vascular leaf primordium tissue (exact), primordio de hoja (Spanish, exact), vascular leaf primordia (exact, plural), 葉原基 (Japanese, exact)
- GO:0005515 — enables — protein binding
- GO:0010468 — acts upstream of or within — regulation of gene expression
- GO:0045944 — involved in — positive regulation of transcription by RNA polymerase II
- GO:0048366 — acts upstream of or within — leaf development
- GO:0048825 — involved in — cotyledon development
- GO:0048366 — involved in — leaf development
- GO:0005634 — colocalizes with — nucleus
- GO:0005634 — located in — nucleus
- GO:0008283 — involved in — cell population proliferation
- GO:0009955 — involved in — adaxial/abaxial pattern specification
- GO:0003713 — enables — transcription coactivator activity
- GO:0051301 — acts upstream of or within — cell division
- CS241 — angustifolia (an), narrow leaves, increased number of rosette leaves.
- CS9956 — Angustifolia, Erecta
- CS9957 — Angustifolia, Compacta
- an3 gif2 — Strong disorganization of quiescent center of root meristem.
- an3 gif2 gif3 — Strong disorganization of quiescent center of root meristem.
- an3-3 oli2-1 — Cell number in first leaves decreased to <20% of the wild type level and cell size increased to more than 2.5-fold the wild type size.
- an3-3 oli5-1 — Cell number in first leaves decreased to <20% of the wild type level and cell size increased to more than 2.5-fold the wild type size.
- an3-3 oli7-1 — Cell number in first leaves decreased to <20% of the wild type level and cell size increased to more than 2.5-fold the wild type size.
Functional Keywords
Literature and News
- The AtGRF family of putative transcription factors is involved in leaf and cotyledon growth in Arabidopsis. DOI: 10.1046/j.1365-313x.2003.01862.x ; PMID: 12974814
- A transcriptional coactivator, AtGIF1, is involved in regulating leaf growth and morphology in Arabidopsis. DOI: 10.1073/pnas.0405450101 ; PMID: 15326298
- Ectopic expression of miR396 suppresses GRF target gene expression and alters leaf growth in Arabidopsis. DOI: 10.1111/j.1399-3054.2009.01229.x ; PMID: 19453503
- The Arabidopsis GRF-INTERACTING FACTOR gene family performs an overlapping function in determining organ size as well as multiple developmental properties. DOI: 10.1104/pp.109.141838 ; PMID: 19648231
- ANGUSTIFOLIA3 plays roles in adaxial/abaxial patterning and growth in leaf morphogenesis. DOI: 10.1093/pcp/pcq178 ; PMID: 21097896
- Stable establishment of cotyledon identity during embryogenesis in Arabidopsis by ANGUSTIFOLIA3 and HANABA TARANU. DOI: 10.1242/dev.081547 ; PMID: 22669825
- Molecular mechanism of microRNA396 mediating pistil development in Arabidopsis. DOI: 10.1104/pp.113.225144 ; PMID: 24285851
- ANGUSTIFOLIA3 binds to SWI/SNF chromatin remodeling complexes to regulate transcription during Arabidopsis leaf development. DOI: 10.1105/tpc.113.115907 ; PMID: 24443518
- The Arabidopsis thaliana GRF-INTERACTING FACTOR gene family plays an essential role in control of male and female reproductive development. DOI: 10.1016/j.ydbio.2013.12.009 ; PMID: 24355747
- Transcription coactivator Arabidopsis ANGUSTIFOLIA3 modulates anthocyanin accumulation and light-induced root elongation through transrepression of Constitutive Photomorphogenic1. DOI: 10.1111/pce.12456 ; PMID: 25256341
- Transcription co-activator Arabidopsis ANGUSTIFOLIA3 (AN3) regulates water-use efficiency and drought tolerance by modulating stomatal density and improving root architecture by the transrepression of YODA (YDA). DOI: 10.1111/pbi.12324 ; PMID: 25599980
- A maize ADP-ribosylation factor ZmArf2 increases organ and seed size by promoting cell expansion in Arabidopsis. DOI: 10.1111/ppl.12359 ; PMID: 26096810
- Light signaling induces anthocyanin biosynthesis via AN3 mediated COP1 expression. DOI: 10.1080/15592324.2014.1001223 ; PMID: 26357851
- Post-transcriptional control of GRF transcription factors by microRNA miR396 and GIF co-activator affects leaf size and longevity. DOI: 10.1111/tpj.12567 ; PMID: 24888433
- Spatio-temporal distribution patterns of GRF-INTERACTING FACTOR expression and leaf size control. DOI: 10.4161/psb.29697 ; PMID: 25763702
- Seed Embryo Development Is Regulated via an AN3-MINI3 Gene Cascade. DOI: 10.3389/fpls.2016.01645 ; PMID: 27857719
- The Arabidopsis ANGUSTIFOLIA3-YODA Gene Cascade Induces Anthocyanin Accumulation by Regulating Sucrose Levels. DOI: 10.3389/fpls.2016.01728 ; PMID: 27920784
- Soluble Sugar Accumulation Can Influence Seed Size via AN3-YDA Gene Cascade. DOI: 10.1021/acs.jafc.7b00228 ; PMID: 28489361
- Corrigendum: Seed Embryo Development Is Regulated via an AN3-MINI3 Gene Cascade. DOI: 10.3389/fpls.2017.01073 ; PMID: 28616014
- Corrigendum: The Arabidopsis ANGUSTIFOLIA3-YODA Gene Cascade Induces Anthocyanin Accumulation by Regulating Sucrose Levels. DOI: 10.3389/fpls.2017.01228 ; PMID: 28698716
- GROWTH-REGULATING FACTOR and GRF-INTERACTING FACTOR Specify Meristematic Cells of Gynoecia and Anthers. DOI: 10.1104/pp.17.00960 ; PMID: 29114079
- GIF Transcriptional Coregulators Control Root Meristem Homeostasis. DOI: 10.1105/tpc.17.00856 ; PMID: 29352064
- Arabidopsis ANGUSTIFOLIA3 (AN3) is associated with the promoter of CONSTITUTIVE PHOTOMORPHOGENIC1 (COP1) to regulate light-mediated stomatal development. DOI: 10.1111/pce.13212 ; PMID: 29645276
- Coordinate activation of a target gene by KDM1C histone demethylase and OTLD1 histone deubiquitinase in Arabidopsis. DOI: 10.1080/15592294.2019.1603982 ; PMID: 30964380
- Control of leaf blade outgrowth and floral organ development by LEUNIG, ANGUSTIFOLIA3 and WOX transcriptional regulators. DOI: 10.1111/nph.15921 ; PMID: 31087654
- ORESARA15 Acts Synergistically with ANGUSTIFOLIA3 and Separately from AINTEGUMENTA to Promote Cell Proliferation during Leaf Growth. DOI: 10.3390/ijms21010241 ; PMID: 31905806
- GROWTH-REGULATING FACTORS Interact with DELLAs and Regulate Growth in Cold Stress. DOI: 10.1105/tpc.19.00784 ; PMID: 32060178
- Suppression of class I compensated cell enlargement by xs2 mutation is mediated by salicylic acid signaling. DOI: 10.1371/journal.pgen.1008873 ; PMID: 32584819
- Transcriptional Regulation of PLETHORA1 in the Root Meristem Through an Importin and Its Two Antagonistic Cargos. DOI: 10.1105/tpc.20.00108 ; PMID: 32989172
- Comprehensive characterization of three classes of Arabidopsis SWI/SNF chromatin remodelling complexes. DOI: 10.1038/s41477-022-01282-z ; PMID: 36471048
Gene Resources
Sequences
cDNA Sequence
- >AT5G28640.1
AGTATGACTCGTCACGTGACCTCCTCTTCTTCGCAGAGACAGAGATAGGATGAGACAGAAAGAAACCAACAAAACCAAACCCCAAAACCCAAGAAAAAGAGAAAAACACTCTCTTCTCTTCTCTCTCTCTCTTTCTATTTAAGAGACTTCACTGTCTCTCTCAGTCTTTTAACGCAAAACAACTTTTGTGGAGGAGAGAAAGCGAGATAACACACACACAGAGATACACATCTTCAATAGTTAAGAGTTTTCTATATACAGAAGCATAGAGGAAAGAGAGAGAGACAGATACAAAAGTTAATATCTCTCTCTCTCACTTGGTGAGACTTCTCTTTTTCCTCTGGGTTTTGTGGTGGGGGTTGTCTCTATAAAAACTTATATATATAAAATATATAAATAAATAAGAAGGAATTATCAGGTTTTATATAAAATAGCAAAAGAAATGCAACAGCACCTGATGCAGATGCAGCCCATGATGGCTGGTTACTACCCCAGCAATGTTACCTCTGATCATATCCAACAGTACTTGGACGAAAACAAATCGTTGATTCTGAAGATTGTTGAGTCTCAAAACTCTGGAAAGCTTAGCGAATGCGCCGAGAATCAAGCAAGGCTTCAACGCAACCTAATGTACCTAGCTGCAATAGCAGATTCTCAGCCTCAGCCACCAAGTGTGCATAGCCAGTATGGATCTGCTGGTGGTGGGATGATTCAGGGAGAAGGAGGGTCACACTATTTGCAGCAGCAACAAGCGACTCAACAGCAACAGATGACTCAGCAGTCTCTAATGGCGGCTCGATCTTCAATGTTGTATGCTCAGCAACAGCAGCAGCAGCAGCCTTACGCGACGCTTCAGCATCAGCAATTGCACCATAGCCAGCTTGGAATGAGCTCGAGCAGCGGAGGAGGAGGAAGCAGTGGTCTCCATATCCTTCAGGGAGAGGCTGGTGGGTTTCATGATTTTGGCCGTGGGAAGCCGGAAATGGGAAGTGGTGGTGGCGGTGAAGGCAGAGGAGGAAGTTCAGGGGATGGTGGAGAAACCCTTTACTTGAAATCATCAGATGATGGGAATTGAAAGAGTGTGGCACAAGGAATCTTAATGATGAAGCAGCAGCAGCAGCAGAAGAAGTAGTAGTAATAATAGGAGTCTTGAAGTTAGTGTGTTTTGGTTTTAGTTGCTTGTTGAAGAAGCAAAGAACTCTTTATTTACTTCTTTTTAGTTTTGTTATTCTCTCTATGTTTGTTCCCTAAAACAGTGAACCTCTTTCGTGGTAGTGTACCATGTAAATCTGCTGGCTCCAAGTTGTGTCGTAATCTTAATATGTTATTTCTCTGAGTTAGACTCTTTTGCTTTAACCAGGACTGAAGTTTTGTAGATCATTGATGTTACCTATTTGGATTCTAAATCGTTATGTAGGCTATATTATTGTTTTTTTTTT - >AT5G28640.3
AGTATGACTCGTCACGTGACCTCCTCTTCTTCGCAGAGACAGAGATAGGATGAGACAGAAAGAAACCAACAAAACCAAACCCCAAAACCCAAGAAAAAGAGAAAAACACTCTCTTCTCTTCTCTCTCTCTCTTTCTATTTAAGAGACTTCACTGTCTCTCTCAGTCTTTTAACGCAAAACAACTTTTGTGGAGGAGAGAAAGCGAGATAACACACACACAGAGATACACATCTTCAATAGTTAAGAGTTTTCTATATACAGAAGCATAGAGGAAAGAGAGAGAGACAGATACAAAAGTTAATATCTCTCTCTCTCACTTGGTGAGACTTCTCTTTTTCCTCTGGGTTTTGTGGTGGGGGTTGTCTCTATAAAAACTTATATATATAAAATATATAAATAAATAAGAAGGAATTATCAGGTTTTATATAAAATAGCAAAAGAAATGCAACAGCACCTGATGCAGATGCAGCCCATGATGGCTGGTTACTACCCCAGCAATGTTACCTCTGATCATATCCAACAGTACTTGGACGAAAACAAATCGTTGATTCTGAAGATTGTTGAGTCTCAAAACTCTGGAAAGCTTAGCGAATGCGCCGAGAATCAAGCAAGGCTTCAACGCAACCTAATGTACCTAGCTGCAATAGCAGATTCTCAGCCTCAGCCACCAAGTGTGCATAGCCAGTATGGATCTGCTGGTGGTGGGATGATTCAGGGAGAAGGAGGGTCACACTATTTGCAGCAGCAACAAGCGACTCAACAGCAACAGATGACTCAGCAGTCTCTAATGGCGGCTCGATCTTCAATGTTGTATGCTCAGCAACAGCAGCAGCAGCAGCCTTACGCGACGCTTCAGCATCAGCAATTGCACCATAGCCAGCTTGGAATGAGCTCGAGCAGCGGAGGAGGAGGAAGCAGTGGTCTCCATATCCTTCAGGGAGAGGCTGGTGGGTTTCATGATTTTGGCCGTGGGAAGCCGGAAATGGGAAGTGGTGGTGGCGGTGAAGGCAGAGGAGGAAGTTCAGGGGATGGTGGAGAAACCCTTTACTTGAAATCATCAGATGATGGGAATTGAAAGAGTGTGGCACAAGGAATCTTAATGATGAAGCAGCAGCAGCAGCAGAAGAAGTAGTAGTAATAATAGGAGTCTTGAAGTTAGTGTGTTTTGGTTTTAGTTGCTTGTTGAAGAAGCAAAGAACTCTTTATTTACTTCTTTTTAGTTTTGTTATTCTCTCTATGTTTGTTCCCTAAAACAGTGAACCTCTTTCGTGGTAGTGTACCATGTAAATCTGCTGGCTCCAAGTTGTGTCGTAATCTTAATATGTTATTTCTCTGAGTTAGACTCTTTTGCTTTAACCAGGACTGAAGTTTTGTAGATCATTGATGTTACCTATTTGGATTCTAAATCGTTATGTAGGCTATATTATTGTTTTTTTTTT - >AT5G28640.2
AGTATGACTCGTCACGTGACCTCCTCTTCTTCGCAGAGACAGAGATAGGATGAGACAGAAAGAAACCAACAAAACCAAACCCCAAAACCCAAGAAAAAGAGAAAAACACTCTCTTCTCTTCTCTCTCTCTCTTTCTATTTAAGAGACTTCACTGTCTCTCTCAGTCTTTTAACGCAAAACAACTTTTGTGGAGGAGAGAAAGCGAGATAACACACACACAGAGATACACATCTTCAATAGTTAAGAGTTTTCTATATACAGAAGCATAGAGGAAAGAGAGAGAGACAGATACAAAAGTTAATATCTCTCTCTCTCACTTGGTGAGACTTCTCTTTTTCCTCTGGGTTTTGTGGTGGGGGTTGTCTCTATAAAAACTTATATATATAAAATATATAAATAAATAAGAAGGAATTATCAGGTTTTATATAAAATAGCAAAAGAAATGCAACAGCACCTGATGCAGATGCAGCCCATGATGGCTGGTTACTACCCCAGCAATGTTACCTCTGATCATATCCAACAGTACTTGGACGAAAACAAATCGTTGATTCTGAAGATTGTTGAGTCTCAAAACTCTGGAAAGCTTAGCGAATGCGCCGAGAATCAAGCAAGGCTTCAACGCAACCTAATGTACCTAGCTGCAATAGCAGATTCTCAGCCTCAGCCACCAAGTGTGCATAGCCAGTATGGATCTGCTGGTGGTGGGATGATTCAGGGAGAAGGAGGGTCACACTATTTGCAGCAGCAACAAGCGACTCAACAGCAACAGATGACTCAGCAGTCTCTAATGGCGGCTCGATCTTCAATGTTGTATGCTCAGCAACAGCAGCAGCAGCAGCCTTACGCGACGCTTCAGCATCAGCAATTGCACCATAGCCAGCTTGGAATGAGCTCGAGCAGCGGAGGAGGAGGAAGCAGTGGTCTCCATATCCTTCAGGGAGAGGCTGGTGGGTTTCATGATTTTGGCCGTGGGAAGCCGGAAATGGGAAGTGGTGGTGGCGGTGAAGGCAGAGGAGGAAGTTCAGGGGATGGTGGAGAAACCCTTTACTTGAAATCATCAGATGATGGGAATTGAAAGAGTGTGGCACAAGGAATCTTAATGATGAAGCAGCAGCAGCAGCAGAAGAAGTAGTAGTAATAATAGGAGTCTTGAAGTTAGTGTGTTTTGGTTTTAGTTGCTTGTTGAAGAAGCAAAGAACTCTTTATTTACTTCTTTTTAGTTTTGTTATTCTCTCTATGTTTGTTCCCTAAAACAGTGAACCTCTTTCGTGGTAGTGTACCATGTAAATCTGCTGGCTCCAAGTTGTGTCGTAATCTTAATATGTTATTTCTCTGAGTTAGACTCTTTTGCTTTAACCAGGACTGAAGTTTTGTAGATCATTGATGTTACCTATTTGGATTCTAAATCGTTATGTAGGCTATATTATTGTTTTTTTTTT
CDS Sequence
Protein Sequence