Information report for AT5G28050
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0005737 — located in — cytoplasm
- GO:0047974 — enables — guanosine deaminase activity
- GO:0006152 — acts upstream of or within — purine nucleoside catabolic process
- GO:0006152 — involved in — purine nucleoside catabolic process
- GO:0002100 — involved in — tRNA wobble adenosine to inosine editing
- GO:0005829 — located in — cytosol
- GO:0005634 — located in — nucleus
- GO:0008251 — enables — tRNA-specific adenosine deaminase activity
- GO:0005576 — located in — extracellular region
- GO:0009536 — located in — plastid
- GO:0008270 — enables — zinc ion binding
Functional Keywords
Literature and News
- Proteomic analysis and extensive protein identification from dry, germinating Arabidopsis seeds and young seedlings. DOI: 10.5483/bmbrep.2005.38.6.650 ; PMID: 16336779
- Plastic and adaptive gene expression patterns associated with temperature stress in Arabidopsis thaliana. DOI: 10.1038/sj.hdy.6800975 ; PMID: 17473866
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Enhanced nucleotide analysis enables the quantification of deoxynucleotides in plants and algae revealing connections between nucleoside and deoxynucleoside metabolism. DOI: 10.1093/plcell/koaa028 ; PMID: 33793855
- Initiation of cytosolic plant purine nucleotide catabolism involves a monospecific xanthosine monophosphate phosphatase. DOI: 10.1038/s41467-021-27152-4 ; PMID: 34824243
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: F4K5T6
- EMBL: CP002688
- AlphaFoldDB: F4K5T6
- EnsemblPlants: AT5G28050.2
- Gramene: AT5G28050.2
- ExpressionAtlas: AT5G28050
- InterPro: IPR002125, IPR016192, IPR016193
- PANTHER: PTHR11079, PTHR11079:SF161
- SUPFAM: SSF53927
- PROSITE: PS00903, PS51747
- Gene3D: 3.40.140.10
- OrthoDB: F4K5T6
- SWISS-MODEL: F4K5T6
- Conserved Domain Database: cd01285
Sequences
cDNA Sequence
- >AT5G28050.2
CTCAATTTTGGACTCGTCTGCTTTTGTTTATATAAACACTTCTCTTCTTCTTCAATCTCCACACACACCACACAAAACCACCTACCTTCTTCGATTTCTCCAGAAATCCTCCTTCAAGTTCATACTCATGGAAGAAGCTAAAGATGAGAAAATTTCTGGTGAATGTTTACTCGTTGTCAATCACCAGATCACCAGAGTGTTATATATCATCGGAATTGGAAGCAAAAGATGGTACCATCTCCGTAGCTTCTGCATTTTCCGGTCACCAACAAGCTGTTCACGATAGCGACCATAAATTCCTAACGCAAGCTGTTGAAGAAGCTTACAAGGGAGTGGACTGTGGTGATGGTGGCCCATTTGGTGCGGTGATTGTGCATAATAACGAGGTTGTCGCTAGCTGCCACAATATGGTTTTGAAATATACTGACCCAACTGCACATGCTGAAGTCACTGCCATTAGAGAGGCATGTAAGAAACTTAACAAAATCGAGTTATCAGAATGCGAGATTTACGCATCTTGTGAGCCATGTCCGATGTGCTTCGGAGCCATCCATCTCTCGAGACTCAAGAGGTTGGTTTATGGAGCCAAAGCCGAAGCAGCTATAGCCATCGGGTTTGATGACTTCATAGCTGATGCTTTGAGAGGCACGGGGGTTTACCAGAAATCTAGTCTGGAGATCAAGAAAGCAGACGGGAATGGCGCTGCGATTGCGGAGCAAGTTTTCCAGAACACAAAGGAGAAGTTCCGTTTATACTAAAGCACTTCTCCATTACCACATTCTTCTTCTTCTTCTCCTTCATGATGGTAATTAGAAGTAGTAGAAGAAGAACTGCACTTGCTTTAACTTAAATAAATCTCTGTTTCAAATTGTTCATTTTAAAAACAGAAGGAAACGAAAAAAAAAATCAATTTCGGTTCTTGTTGACACGATTTGTAATTTCTTTTCTTCATTTGAATTGAACTGGTAAATACTTTCTTCTCTGTCAAAATCTTTATTTTCTATTTTCTGTACAAGGCCAAGTTCTTCACTAATAAATCGAATTGTTTTTCTA - >AT5G28050.1
CTCAATTTTGGACTCGTCTGCTTTTGTTTATATAAACACTTCTCTTCTTCTTCAATCTCCACACACACCACACAAAACCACCTACCTTCTTCGATTTCTCCAGAAATCCTCCTTCAAGTTCATACTCATGGAAGAAGCTAAAGATGAGAAAATTTCTGGTGAATGTTTACTCGTTGTCAATCACCAGATCACCAGAGTGTTATATATCATCGGAATTGGAAGCAAAAGATGGTACCATCTCCGTAGCTTCTGCATTTTCCGGTCACCAACAAGCTGTTCACGATAGCGACCATAAATTCCTAACGCAAGCTGTTGAAGAAGCTTACAAGGGAGTGGACTGTGGTGATGGTGGCCCATTTGGTGCGGTGATTGTGCATAATAACGAGGTTGTCGCTAGCTGCCACAATATGGTTTTGAAATATACTGACCCAACTGCACATGCTGAAGTCACTGCCATTAGAGAGGCATGTAAGAAACTTAACAAAATCGAGTTATCAGAATGCGAGATTTACGCATCTTGTGAGCCATGTCCGATGTGCTTCGGAGCCATCCATCTCTCGAGACTCAAGAGGTTGGTTTATGGAGCCAAAGCCGAAGCAGCTATAGCCATCGGGTTTGATGACTTCATAGCTGATGCTTTGAGAGGCACGGGGGTTTACCAGAAATCTAGTCTGGAGATCAAGAAAGCAGACGGGAATGGCGCTGCGATTGCGGAGCAAGTTTTCCAGAACACAAAGGAGAAGTTCCGTTTATACTAAAGCACTTCTCCATTACCACATTCTTCTTCTTCTTCTCCTTCATGATGGTAATTAGAAGTAGTAGAAGAAGAACTGCACTTGCTTTAACTTAAATAAATCTCTGTTTCAAATTGTTCATTTTAAAAACAGAAGGAAACGAAAAAAAAAATCAATTTCGGTTCTTGTTGACACGATTTGTAATTTCTTTTCTTCATTTGAATTGAACTGGTAAATACTTTCTTCTCTGTCAAAATCTTTATTTTCTATTTTCTGTACAAGGCCAAGTTCTTCACTAATAAATCGAATTGTTTTTCTA - >AT5G28050.3
CTCAATTTTGGACTCGTCTGCTTTTGTTTATATAAACACTTCTCTTCTTCTTCAATCTCCACACACACCACACAAAACCACCTACCTTCTTCGATTTCTCCAGAAATCCTCCTTCAAGTTCATACTCATGGAAGAAGCTAAAGATGAGAAAATTTCTGGTGAATGTTTACTCGTTGTCAATCACCAGATCACCAGAGTGTTATATATCATCGGAATTGGAAGCAAAAGATGGTACCATCTCCGTAGCTTCTGCATTTTCCGGTCACCAACAAGCTGTTCACGATAGCGACCATAAATTCCTAACGCAAGCTGTTGAAGAAGCTTACAAGGGAGTGGACTGTGGTGATGGTGGCCCATTTGGTGCGGTGATTGTGCATAATAACGAGGTTGTCGCTAGCTGCCACAATATGGTTTTGAAATATACTGACCCAACTGCACATGCTGAAGTCACTGCCATTAGAGAGGCATGTAAGAAACTTAACAAAATCGAGTTATCAGAATGCGAGATTTACGCATCTTGTGAGCCATGTCCGATGTGCTTCGGAGCCATCCATCTCTCGAGACTCAAGAGGTTGGTTTATGGAGCCAAAGCCGAAGCAGCTATAGCCATCGGGTTTGATGACTTCATAGCTGATGCTTTGAGAGGCACGGGGGTTTACCAGAAATCTAGTCTGGAGATCAAGAAAGCAGACGGGAATGGCGCTGCGATTGCGGAGCAAGTTTTCCAGAACACAAAGGAGAAGTTCCGTTTATACTAAAGCACTTCTCCATTACCACATTCTTCTTCTTCTTCTCCTTCATGATGGTAATTAGAAGTAGTAGAAGAAGAACTGCACTTGCTTTAACTTAAATAAATCTCTGTTTCAAATTGTTCATTTTAAAAACAGAAGGAAACGAAAAAAAAAATCAATTTCGGTTCTTGTTGACACGATTTGTAATTTCTTTTCTTCATTTGAATTGAACTGGTAAATACTTTCTTCTCTGTCAAAATCTTTATTTTCTATTTTCTGTACAAGGCCAAGTTCTTCACTAATAAATCGAATTGTTTTTCTA
CDS Sequence
Protein Sequence