Gene Details:

• Gene ID: AT5G28040
• Gene Symbol: VFP4
• Gene Name: VIRF INTERACTING PROTEIN 4
• Description: DNA-binding storekeeper protein-related transcriptional regulator;(source:Araport11)
• TAIR Accession: locus:2143764
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G28040.1     AT5G28040.2

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)

Gene Ontology:

• GO:0005515  — enables — protein binding
• GO:0042742  — acts upstream of or within — defense response to bacterium
• GO:0005737  — located in — cytoplasm
• GO:0000976  — enables — transcription cis-regulatory region binding
• GO:0006355  — acts upstream of or within — regulation of DNA-templated transcription
• GO:0005634  — located in — nucleus
• GO:0005634  — is active in — nucleus

Germplasm Phenotype:

• SALK_129879C  — No obvious morphological defect.Mutants do show a changes in the expression (reduction) of genes involved in stress responses.

Function-related keywords:

• root ,  plant sperm cell

Literature:

• GeBP, the first member of a new gene family in Arabidopsis, encodes a nuclear protein with DNA-binding activity and is regulated by KNAT1.   DOI:  10.1046/j.1365-313x.2003.01622.x ;  PMID:  12535344
• Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis.   DOI:  10.1104/pp.108.126375 ;  PMID:  18775970
• Promoter-based integration in plant defense regulation.   DOI:  10.1104/pp.114.248716 ;  PMID:  25352272
• An Arabidopsis gene regulatory network for secondary cell wall synthesis.   DOI:  10.1038/nature14099 ;  PMID:  25533953
• The Agrobacterium F-Box Protein Effector VirF Destabilizes the Arabidopsis GLABROUS1 Enhancer/Binding Protein-Like Transcription Factor VFP4, a Transcriptional Activator of Defense Response Genes.   DOI:  10.1094/MPMI-07-17-0188-FI ;  PMID:  29264953
• Transcriptional regulation of nitrogen-associated metabolism and growth.   DOI:  10.1038/s41586-018-0656-3 ;  PMID:  30356219
• GeBP, the first member of a new gene family in Arabidopsis, encodes a nuclear protein with DNA-binding activity and is regulated by KNAT1.   DOI:  10.1046/j.1365-313x.2003.01622.x ;  PMID:  12535344

Sequences: