Information report for AT5G27830
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0005634 — located in — nucleus
- GO:0005576 — located in — extracellular region
- GO:0009751 — involved in — response to salicylic acid
- GO:0008517 — enables — folic acid transmembrane transporter activity
- GO:0005542 — enables — folic acid binding
- GO:0015884 — involved in — folic acid transport
- GO:0006979 — acts upstream of or within — response to oxidative stress
- GO:0015884 — acts upstream of or within — folic acid transport
- SALK_043755C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:increased,osmotic stress:increased,salt stress:no change,ABA:no change,hypoxia:no change.
- SALK_106308c — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:decreased,osmotic stress:no change,salt stress:decreased,ABA:no change,hypoxia:no change.
Functional Keywords
Literature and News
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Enhanced tolerance to oxidative stress in transgenic Arabidopsis plants expressing proteins of unknown function. DOI: 10.1104/pp.108.124875 ; PMID: 18614705
- Linking genes of unknown function with abiotic stress responses by high-throughput phenotype screening. DOI: 10.1111/ppl.12013 ; PMID: 23517122
- GhAP1-D3 positively regulates flowering time and early maturity with no yield and fiber quality penalties in upland cotton. DOI: 10.1111/jipb.13409 ; PMID: 36398758
Gene Resources
- UniProt: A8MS02
- EMBL: CP002688
- AlphaFoldDB: A8MS02
- EnsemblPlants: AT5G27830.3
- Gramene: AT5G27830.3
- ExpressionAtlas: AT5G27830
- InterPro: IPR018143, IPR053305
- PANTHER: PTHR37390, PTHR37390:SF1
Sequences
cDNA Sequence
- >AT5G27830.3
CGAGTACTCGTCTTTGTCTTTTGTCATTTTTTGCTTCGAGCTAAGATCAGTGAAGAGAAAAGATGGGAAGATGTTTAACGAAGAAGGTGTTTTTGATTCAGAGTCCGATCTTGTTTCTTCATCTCCTGATCTCTTTATCGTCCGAACAATGTTTTCAGGTGCAGTGAAACCGGATTTGAAAGGAGTATGTGTTTCTAAAGGAGGGAGGTTTCCGCCATATGAGTTGGAAGGGAAGCCTCCTAAGTCTGTTGGTAGGGGATCCAAGGATCTTACTCTGTGCCGGGTGTTTCGTAAAAAGACTTGTTGTTCTTCTGTTCAGACTAACCCGGCTTTCGTAGCTGTTAGAAACCTGGCTACTTATGGAGAAGCTAGTCAAGAATGCTTGGAGTTGTTTGAGTTATTGGAGTGTTCAATCTGTAACCCAAATGTTGGAATTCAACCGGGTCCTCCTCGTATATGCGCCTCGTTCTGTGACAGAGTCTTTGAAGCCTGCAAAGATGCATACTTTGCCAGTAATGCACTTAAACGGGTGATTGGCCCTTGTGGAGTAAACGACGACATAATCTGCATTAAGGCCTCAAATTGGGAATCCAATGGCACATCATTCTGTGAAGCAGCTGGTTTTGCTGTTCAAAGGAATGATGATTCTAGAGAAAAACCGTGCTACGGAAGCAAAGCAAGTCTAGAATCAGTAGTGGAATCATGGTCAAGAGACTCTCGAAAGGAGACGCCTTTAAAAACTGAGACTTTGTCATGTTTTAAAGATCTTCTCCAATGGGTTCGCGAAATGACAACGATTCAGAAAATTTCTTTGGGAATGTCGTTTCTTATAGCAGGAATGTTCTTGATCAGGCAATCTAATAACCGTAATCAGAAGCAGCGACTAGCTGCGATTCAGAGGACCGCTAGAAGATTGAGAGGGAACGGGAACGGGGATTCATACAGTGCAGCTATAAATAGAAGAACAAGCTCTGATTAAGCTTATGGAATGAATATTTTACAGTAGTTTGTAAAAGCCATGAATTTAACTGTTATCAATAGTAAAGGCTTGTCTCATGTGAAATTTTGCCAAATGCGACAAGAAGTGTGTTGTACTGTTCTGTCTTTTTATACTGATAAAATTAGGGACAAGTAAAATATAACTTTGGCAATGGACAAATGAAGAAAATGTGGAA - >AT5G27830.4
CGAGTACTCGTCTTTGTCTTTTGTCATTTTTTGCTTCGAGCTAAGATCAGTGAAGAGAAAAGATGGGAAGATGTTTAACGAAGAAGGTGTTTTTGATTCAGAGTCCGATCTTGTTTCTTCATCTCCTGATCTCTTTATCGTCCGAACAATGTTTTCAGGTGCAGTGAAACCGGATTTGAAAGGAGTATGTGTTTCTAAAGGAGGGAGGTTTCCGCCATATGAGTTGGAAGGGAAGCCTCCTAAGTCTGTTGGTAGGGGATCCAAGGATCTTACTCTGTGCCGGGTGTTTCGTAAAAAGACTTGTTGTTCTTCTGTTCAGACTAACCCGGCTTTCGTAGCTGTTAGAAACCTGGCTACTTATGGAGAAGCTAGTCAAGAATGCTTGGAGTTGTTTGAGTTATTGGAGTGTTCAATCTGTAACCCAAATGTTGGAATTCAACCGGGTCCTCCTCGTATATGCGCCTCGTTCTGTGACAGAGTCTTTGAAGCCTGCAAAGATGCATACTTTGCCAGTAATGCACTTAAACGGGTGATTGGCCCTTGTGGAGTAAACGACGACATAATCTGCATTAAGGCCTCAAATTGGGAATCCAATGGCACATCATTCTGTGAAGCAGCTGGTTTTGCTGTTCAAAGGAATGATGATTCTAGAGAAAAACCGTGCTACGGAAGCAAAGCAAGTCTAGAATCAGTAGTGGAATCATGGTCAAGAGACTCTCGAAAGGAGACGCCTTTAAAAACTGAGACTTTGTCATGTTTTAAAGATCTTCTCCAATGGGTTCGCGAAATGACAACGATTCAGAAAATTTCTTTGGGAATGTCGTTTCTTATAGCAGGAATGTTCTTGATCAGGCAATCTAATAACCGTAATCAGAAGCAGCGACTAGCTGCGATTCAGAGGACCGCTAGAAGATTGAGAGGGAACGGGAACGGGGATTCATACAGTGCAGCTATAAATAGAAGAACAAGCTCTGATTAAGCTTATGGAATGAATATTTTACAGTAGTTTGTAAAAGCCATGAATTTAACTGTTATCAATAGTAAAGGCTTGTCTCATGTGAAATTTTGCCAAATGCGACAAGAAGTGTGTTGTACTGTTCTGTCTTTTTATACTGATAAAATTAGGGACAAGTAAAATATAACTTTGGCAATGGACAAATGAAGAAAATGTGGAA - >AT5G27830.5
CGAGTACTCGTCTTTGTCTTTTGTCATTTTTTGCTTCGAGCTAAGATCAGTGAAGAGAAAAGATGGGAAGATGTTTAACGAAGAAGGTGTTTTTGATTCAGAGTCCGATCTTGTTTCTTCATCTCCTGATCTCTTTATCGTCCGAACAATGTTTTCAGGTGCAGTGAAACCGGATTTGAAAGGAGTATGTGTTTCTAAAGGAGGGAGGTTTCCGCCATATGAGTTGGAAGGGAAGCCTCCTAAGTCTGTTGGTAGGGGATCCAAGGATCTTACTCTGTGCCGGGTGTTTCGTAAAAAGACTTGTTGTTCTTCTGTTCAGACTAACCCGGCTTTCGTAGCTGTTAGAAACCTGGCTACTTATGGAGAAGCTAGTCAAGAATGCTTGGAGTTGTTTGAGTTATTGGAGTGTTCAATCTGTAACCCAAATGTTGGAATTCAACCGGGTCCTCCTCGTATATGCGCCTCGTTCTGTGACAGAGTCTTTGAAGCCTGCAAAGATGCATACTTTGCCAGTAATGCACTTAAACGGGTGATTGGCCCTTGTGGAGTAAACGACGACATAATCTGCATTAAGGCCTCAAATTGGGAATCCAATGGCACATCATTCTGTGAAGCAGCTGGTTTTGCTGTTCAAAGGAATGATGATTCTAGAGAAAAACCGTGCTACGGAAGCAAAGCAAGTCTAGAATCAGTAGTGGAATCATGGTCAAGAGACTCTCGAAAGGAGACGCCTTTAAAAACTGAGACTTTGTCATGTTTTAAAGATCTTCTCCAATGGGTTCGCGAAATGACAACGATTCAGAAAATTTCTTTGGGAATGTCGTTTCTTATAGCAGGAATGTTCTTGATCAGGCAATCTAATAACCGTAATCAGAAGCAGCGACTAGCTGCGATTCAGAGGACCGCTAGAAGATTGAGAGGGAACGGGAACGGGGATTCATACAGTGCAGCTATAAATAGAAGAACAAGCTCTGATTAAGCTTATGGAATGAATATTTTACAGTAGTTTGTAAAAGCCATGAATTTAACTGTTATCAATAGTAAAGGCTTGTCTCATGTGAAATTTTGCCAAATGCGACAAGAAGTGTGTTGTACTGTTCTGTCTTTTTATACTGATAAAATTAGGGACAAGTAAAATATAACTTTGGCAATGGACAAATGAAGAAAATGTGGAA - >AT5G27830.1
CGAGTACTCGTCTTTGTCTTTTGTCATTTTTTGCTTCGAGCTAAGATCAGTGAAGAGAAAAGATGGGAAGATGTTTAACGAAGAAGGTGTTTTTGATTCAGAGTCCGATCTTGTTTCTTCATCTCCTGATCTCTTTATCGTCCGAACAATGTTTTCAGGTGCAGTGAAACCGGATTTGAAAGGAGTATGTGTTTCTAAAGGAGGGAGGTTTCCGCCATATGAGTTGGAAGGGAAGCCTCCTAAGTCTGTTGGTAGGGGATCCAAGGATCTTACTCTGTGCCGGGTGTTTCGTAAAAAGACTTGTTGTTCTTCTGTTCAGACTAACCCGGCTTTCGTAGCTGTTAGAAACCTGGCTACTTATGGAGAAGCTAGTCAAGAATGCTTGGAGTTGTTTGAGTTATTGGAGTGTTCAATCTGTAACCCAAATGTTGGAATTCAACCGGGTCCTCCTCGTATATGCGCCTCGTTCTGTGACAGAGTCTTTGAAGCCTGCAAAGATGCATACTTTGCCAGTAATGCACTTAAACGGGTGATTGGCCCTTGTGGAGTAAACGACGACATAATCTGCATTAAGGCCTCAAATTGGGAATCCAATGGCACATCATTCTGTGAAGCAGCTGGTTTTGCTGTTCAAAGGAATGATGATTCTAGAGAAAAACCGTGCTACGGAAGCAAAGCAAGTCTAGAATCAGTAGTGGAATCATGGTCAAGAGACTCTCGAAAGGAGACGCCTTTAAAAACTGAGACTTTGTCATGTTTTAAAGATCTTCTCCAATGGGTTCGCGAAATGACAACGATTCAGAAAATTTCTTTGGGAATGTCGTTTCTTATAGCAGGAATGTTCTTGATCAGGCAATCTAATAACCGTAATCAGAAGCAGCGACTAGCTGCGATTCAGAGGACCGCTAGAAGATTGAGAGGGAACGGGAACGGGGATTCATACAGTGCAGCTATAAATAGAAGAACAAGCTCTGATTAAGCTTATGGAATGAATATTTTACAGTAGTTTGTAAAAGCCATGAATTTAACTGTTATCAATAGTAAAGGCTTGTCTCATGTGAAATTTTGCCAAATGCGACAAGAAGTGTGTTGTACTGTTCTGTCTTTTTATACTGATAAAATTAGGGACAAGTAAAATATAACTTTGGCAATGGACAAATGAAGAAAATGTGGAA - >AT5G27830.6
CGAGTACTCGTCTTTGTCTTTTGTCATTTTTTGCTTCGAGCTAAGATCAGTGAAGAGAAAAGATGGGAAGATGTTTAACGAAGAAGGTGTTTTTGATTCAGAGTCCGATCTTGTTTCTTCATCTCCTGATCTCTTTATCGTCCGAACAATGTTTTCAGGTGCAGTGAAACCGGATTTGAAAGGAGTATGTGTTTCTAAAGGAGGGAGGTTTCCGCCATATGAGTTGGAAGGGAAGCCTCCTAAGTCTGTTGGTAGGGGATCCAAGGATCTTACTCTGTGCCGGGTGTTTCGTAAAAAGACTTGTTGTTCTTCTGTTCAGACTAACCCGGCTTTCGTAGCTGTTAGAAACCTGGCTACTTATGGAGAAGCTAGTCAAGAATGCTTGGAGTTGTTTGAGTTATTGGAGTGTTCAATCTGTAACCCAAATGTTGGAATTCAACCGGGTCCTCCTCGTATATGCGCCTCGTTCTGTGACAGAGTCTTTGAAGCCTGCAAAGATGCATACTTTGCCAGTAATGCACTTAAACGGGTGATTGGCCCTTGTGGAGTAAACGACGACATAATCTGCATTAAGGCCTCAAATTGGGAATCCAATGGCACATCATTCTGTGAAGCAGCTGGTTTTGCTGTTCAAAGGAATGATGATTCTAGAGAAAAACCGTGCTACGGAAGCAAAGCAAGTCTAGAATCAGTAGTGGAATCATGGTCAAGAGACTCTCGAAAGGAGACGCCTTTAAAAACTGAGACTTTGTCATGTTTTAAAGATCTTCTCCAATGGGTTCGCGAAATGACAACGATTCAGAAAATTTCTTTGGGAATGTCGTTTCTTATAGCAGGAATGTTCTTGATCAGGCAATCTAATAACCGTAATCAGAAGCAGCGACTAGCTGCGATTCAGAGGACCGCTAGAAGATTGAGAGGGAACGGGAACGGGGATTCATACAGTGCAGCTATAAATAGAAGAACAAGCTCTGATTAAGCTTATGGAATGAATATTTTACAGTAGTTTGTAAAAGCCATGAATTTAACTGTTATCAATAGTAAAGGCTTGTCTCATGTGAAATTTTGCCAAATGCGACAAGAAGTGTGTTGTACTGTTCTGTCTTTTTATACTGATAAAATTAGGGACAAGTAAAATATAACTTTGGCAATGGACAAATGAAGAAAATGTGGAA - >AT5G27830.2
CGAGTACTCGTCTTTGTCTTTTGTCATTTTTTGCTTCGAGCTAAGATCAGTGAAGAGAAAAGATGGGAAGATGTTTAACGAAGAAGGTGTTTTTGATTCAGAGTCCGATCTTGTTTCTTCATCTCCTGATCTCTTTATCGTCCGAACAATGTTTTCAGGTGCAGTGAAACCGGATTTGAAAGGAGTATGTGTTTCTAAAGGAGGGAGGTTTCCGCCATATGAGTTGGAAGGGAAGCCTCCTAAGTCTGTTGGTAGGGGATCCAAGGATCTTACTCTGTGCCGGGTGTTTCGTAAAAAGACTTGTTGTTCTTCTGTTCAGACTAACCCGGCTTTCGTAGCTGTTAGAAACCTGGCTACTTATGGAGAAGCTAGTCAAGAATGCTTGGAGTTGTTTGAGTTATTGGAGTGTTCAATCTGTAACCCAAATGTTGGAATTCAACCGGGTCCTCCTCGTATATGCGCCTCGTTCTGTGACAGAGTCTTTGAAGCCTGCAAAGATGCATACTTTGCCAGTAATGCACTTAAACGGGTGATTGGCCCTTGTGGAGTAAACGACGACATAATCTGCATTAAGGCCTCAAATTGGGAATCCAATGGCACATCATTCTGTGAAGCAGCTGGTTTTGCTGTTCAAAGGAATGATGATTCTAGAGAAAAACCGTGCTACGGAAGCAAAGCAAGTCTAGAATCAGTAGTGGAATCATGGTCAAGAGACTCTCGAAAGGAGACGCCTTTAAAAACTGAGACTTTGTCATGTTTTAAAGATCTTCTCCAATGGGTTCGCGAAATGACAACGATTCAGAAAATTTCTTTGGGAATGTCGTTTCTTATAGCAGGAATGTTCTTGATCAGGCAATCTAATAACCGTAATCAGAAGCAGCGACTAGCTGCGATTCAGAGGACCGCTAGAAGATTGAGAGGGAACGGGAACGGGGATTCATACAGTGCAGCTATAAATAGAAGAACAAGCTCTGATTAAGCTTATGGAATGAATATTTTACAGTAGTTTGTAAAAGCCATGAATTTAACTGTTATCAATAGTAAAGGCTTGTCTCATGTGAAATTTTGCCAAATGCGACAAGAAGTGTGTTGTACTGTTCTGTCTTTTTATACTGATAAAATTAGGGACAAGTAAAATATAACTTTGGCAATGGACAAATGAAGAAAATGTGGAA
CDS Sequence
Protein Sequence