Gene Details:

• Gene ID: AT5G27740
• Gene Symbol: EMB161, EMB251, EMB2775, RFC3, RFC5
• Gene Name: EMBRYO DEFECTIVE 161, EMBRYO DEFECTIVE 251, EMBRYO DEFECTIVE 2775, replication factor C 3, replication factor C 5
• Description: ATPase family associated with various cellular activities (AAA);(source:Araport11)
• TAIR Accession: locus:2180315
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G27740.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)

Gene Ontology:

• GO:0006281  — involved in — DNA repair
• GO:0006261  — involved in — DNA-templated DNA replication
• GO:0009793  — acts upstream of or within — embryo development ending in seed dormancy
• GO:0005634  — located in — nucleus
• GO:0003689  — contributes to — DNA clamp loader activity
• GO:0005634  — is active in — nucleus
• GO:0005663  — part of — DNA replication factor C complex

Germplasm Phenotype:

• CS3037  — developmental arrest of mutant embryos occurs at late preglobular stage; white seeds; 24.5% mutant.
• CS84680  — developmental arrest of mutant embryos occurs at preglobular stage, watery seeds; white seeds; 21.2% mutant; 51.2% aborted seeds in top half of silique.

Function-related keywords:

• root ,  plant sperm cell

Literature:

• A genome-wide identification of E2F-regulated genes in Arabidopsis.   DOI:  10.1046/j.1365-313x.2003.01662.x ;  PMID:  12609051
• Genome-wide identification of potential plant E2F target genes.   DOI:  10.1104/pp.105.066290 ;  PMID:  16126853
• Genome-wide analysis of the core DNA replication machinery in the higher plants Arabidopsis and rice.   DOI:  10.1104/pp.107.101105 ;  PMID:  17556508
• A predicted interactome for Arabidopsis.   DOI:  10.1104/pp.107.103465 ;  PMID:  17675552
• Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes.   DOI:  10.1186/1471-2164-9-113 ;  PMID:  18315867
• Identifying essential genes in Arabidopsis thaliana.   DOI:  10.1016/j.tplants.2008.06.003 ;  PMID:  18684657
• Integrating the genetic and physical maps of Arabidopsis thaliana: identification of mapped alleles of cloned essential (EMB) genes.   DOI:  10.1371/journal.pone.0007386 ;  PMID:  19812694
• DNA replication factor C1 mediates genomic stability and transcriptional gene silencing in Arabidopsis.   DOI:  10.1105/tpc.110.076349 ;  PMID:  20639449
• Exploring potential new floral organ morphogenesis genes of Arabidopsis thaliana using systems biology approach.   DOI:  10.3389/fpls.2015.00829 ;  PMID:  26528302
• Subunit Interaction Differences Between the Replication Factor C Complexes in Arabidopsis and Rice.   DOI:  10.3389/fpls.2018.00779 ;  PMID:  29971074
• A genetic link between epigenetic repressor AS1-AS2 and DNA replication factors in establishment of adaxial-abaxial leaf polarity of Arabidopsis.   DOI:  10.5511/plantbiotechnology.18.0129b ;  PMID:  31275036
• Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis.   DOI:  10.1111/nph.16071 ;  PMID:  31334862

Sequences: