Gene Details:

• Gene ID: AT5G27720
• Gene Symbol: emb1644, LSM4
• Gene Name: embryo defective 1644, SM-like protein 4
• Description: Small nuclear ribonucleoprotein family protein;(source:Araport11)
• TAIR Accession: locus:2180295
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G27720.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)

Gene Ontology:

• GO:0000387  — involved in — spliceosomal snRNP assembly
• GO:0009793  — acts upstream of or within — embryo development ending in seed dormancy
• GO:0000932  — is active in — P-body
• GO:0005515  — enables — protein binding
• GO:0009536  — located in — plastid
• GO:0033962  — involved in — P-body assembly

Function-related keywords:

• root

Literature:

• Identification of genes required for embryo development in Arabidopsis.   DOI:  10.1104/pp.104.045179 ;  PMID:  15266054
• Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106.   DOI:  10.1104/pp.108.126979 ;  PMID:  18805951
• Genome-wide identification and evolutionary analysis of Arabidopsis sm genes family.   DOI:  10.1080/07391102.2011.10508593 ;  PMID:  21142222
• Arabidopsis floral initiator SKB1 confers high salt tolerance by regulating transcription and pre-mRNA splicing through altering histone H4R3 and small nuclear ribonucleoprotein LSM4 methylation.   DOI:  10.1105/tpc.110.081356 ;  PMID:  21258002
• LSM proteins provide accurate splicing and decay of selected transcripts to ensure normal Arabidopsis development.   DOI:  10.1105/tpc.112.103697 ;  PMID:  23221597
• Arabidopsis thaliana LSM proteins function in mRNA splicing and degradation.   DOI:  10.1093/nar/gkt296 ;  PMID:  23620288
• Role for LSM genes in the regulation of circadian rhythms.   DOI:  10.1073/pnas.1409791111 ;  PMID:  25288739
• Endogenous Arabidopsis messenger RNAs transported to distant tissues.   DOI:  10.1038/nplants.2015.25 ;  PMID:  27247031
• Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis.   DOI:  10.1111/nph.16071 ;  PMID:  31334862
• AtMC1 Associates With LSM4 to Regulate Plant Immunity Through Modulating Pre-mRNA Splicing.   DOI:  10.1094/MPMI-07-21-0197-R ;  PMID:  34515495

Sequences: