Gene Details:

• Gene ID: AT5G27700
• Gene Symbol: eS21y, EVR1L1, RPS21C
• Gene Name: Ribosomal Protein eS21y, EVERSHED1-LIKE 1
• Description: Ribosomal protein S21e;(source:Araport11)
• TAIR Accession: locus:2180275
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G27700.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Gene Ontology:

• GO:0005829  — located in — cytosol
• GO:0006412  — involved in — translation
• GO:0000447  — involved in — endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
• GO:0000461  — involved in — endonucleolytic cleavage to generate mature 3-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000461 27807 P other cellular processes IBA none PANTHER:PTN000047682|SGD:S000001765|SGD:S000003672 Communication:501741973 2023-06-07 AT5G27700 gene:2180274 AT5G27700.1 located in cytoplasm GO:0005737 231 C cytoplasm ISM predicted protein features AnalysisReference:501780126 rkaundal 2018-08-31 AT5G27700 locus:2180275 AT5G27700 located in plastid GO:0009536 576 C plastid HDA none Publication:501776792|PMID:28887381 dszymanski 2019-04-04 AT5G27700 locus:2180275 AT5G27700 located in nucleus GO:0005634 537 C nucleus IDA localization of GFP/YFP fusion protein Publication:501777706|PMID:29142022 TAIR 2018-01-30 AT5G27700 locus:2180275 AT5G27700 involved in endonucleolytic cleavage to generate mature 3-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
• GO:0003735  — enables — structural constituent of ribosome
• GO:0022627  — part of — cytosolic small ribosomal subunit
• NONE  — involved in — endonucleolytic cleavage to generate mature 3-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000461 27807 P nucleobase-containing compound metabolic process IBA none PANTHER:PTN000047682|SGD:S000001765|SGD:S000003672 Communication:501741973 2023-06-07 AT5G27700 locus:2180275 AT5G27700 involved in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000447 27793 P nucleobase-containing compound metabolic process IBA none PANTHER:PTN000047682|SGD:S000001765|SGD:S000003672 Communication:501741973 2022-04-20 AT5G27700 locus:2180275 AT5G27700 located in cytosolic small ribosomal subunit GO:0022627 29019 C ribosome HDA none NONE Publication:501723363|PMID:17934214 TAIR 2021-04-12 AT5G27700 locus:2180275 AT5G27700 part of cytosolic small ribosomal subunit GO:0022627 29019 C cytosol IBA none PANTHER:PTN000047682|UniProtKB:Q8IHS5|RGD:621038|UniProtKB:P63221|SGD:S000003672|UniProtKB:P63220|MGI:MGI:1913731|SGD:S000001765 Communication:501741973 2023-06-07 AT5G27700 locus:2180275 AT5G27700 located in cytosolic small ribosomal subunit GO:0022627 29019 C cytosol HDA none NONE Publication:501723363|PMID:17934214 TAIR 2021-04-12 AT5G27700 locus:2180275 AT5G27700 involved in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000447 27793 P other cellular processes IBA none PANTHER:PTN000047682|SGD:S000001765|SGD:S000003672 Communication:501741973 2022-04-20 AT5G27710 locus:2180285 AT5G27710 involved in biological_process GO:0008150 5239 P unknown biological processes ND Unknown biological process NONE Communication:1345790 TAIR 2022-02-01 AT5G27710 locus:2180285 AT5G27710 enables molecular_function GO:0003674 3226 F unknown molecular functions ND Unknown molecular function Communication:1345790 TAIR 2009-05-08 AT5G27710 gene:6532546054 AT5G27710.2 located in extracellular region GO:0005576 294 C extracellular region ISM predicted protein features AnalysisReference:501780126 rkaundal 2018-08-31 AT5G27715 locus:1005716855 AT5G27715 acts upstream of or within translation GO:0006412 6869 P translation TAS none Publication:501710108|PMID:8980477 2021-04-01 AT5G27715 locus:1005716855 AT5G27715 acts upstream of or within translational elongation GO:0006414 6905 P other cellular processes TAS text book or dictionary; -material has become common knowledge NONE Publication:501710108|PMID:8980477 TAIR 2005-08-31 AT5G27715 locus:1005716855 AT5G27715 acts upstream of or within translational elongation GO:0006414 6905 P other metabolic processes TAS text book or dictionary; -material has become common knowledge NONE Publication:501710108|PMID:8980477 TAIR 2005-08-31 AT5G27715 locus:1005716855 AT5G27715 acts upstream of or within translational elongation GO:0006414 6905 P biosynthetic process TAS text book or dictionary; -material has become common knowledge NONE Publication:501710108|PMID:8980477 TAIR 2005-08-31 AT5G27715 locus:1005716855 AT5G27715 acts upstream of or within translational elongation GO:0006414 6905 P translation TAS text book or dictionary; -material has become common knowledge NONE Publication:501710108|PMID:8980477 TAIR 2005-08-31 AT5G27715 locus:1005716855 AT5G27715 enables triplet codon-amino acid adaptor activity GO:0030533 9889 F RNA binding TAS text book or dictionary; -material has become common knowledge Publication:501710108|PMID:8980477 TAIR 2005-08-31 AT5G27715 locus:1005716855 AT5G27715 is active in cellular_component GO:0005575 163 C unknown cellular components ND Unknown cellular component NONE Communication:1345790 TAIR 2022-02-01 AT5G27720 locus:2180295 AT5G27720 involved in spliceosomal snRNP assembly GO:0000387 15975 P nucleobase-containing compound metabolic process IBA none PANTHER:PTN000596745|UniProtKB:P62314|UniProtKB:P62318 Communication:501741973 2023-04-13 AT5G27720 locus:2180295 AT5G27720 involved in spliceosomal snRNP assembly GO:0000387 15975 P other metabolic processes IBA none PANTHER:PTN000596745|UniProtKB:P62314|UniProtKB:P62318 Communication:501741973 2023-04-13 AT5G27720 locus:2180295 AT5G27720 located in cytosol GO:0005829 241 C cytosol HDA none Publication:501761766|PMID:25293756 dszymanski 2019-04-04 AT5G27720 locus:2180295 AT5G27720 part of U6 snRNP GO:0005688 673 C nucleus IBA none PANTHER:PTN000596817|PomBase:SPBC30D10.06|SGD:S000000914 Communication:501741973 2023-04-13 AT5G27720 locus:2180295 AT5G27720 acts upstream of or within embryo development ending in seed dormancy GO:0009793 11994 P multicellular organism development NAS Database entries that dont cite a paper (e.g. SwissProt records)

Germplasm Phenotype:

• SAIL_358_H08  — Delayed leaf initiation and reduced leaf expansion.
• evr1-1/evr1l1-1  — Double mutant shows non allelic non complementation. Additionally the combination is likely to result in embryo lethality.

Function-related keywords:

• root ,  plant sperm cell ,  guard cell

Literature:

• The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome.   DOI:  6834 ;  PMID:  11598216
• Towards the proteome of Brassica napus phloem sap.   DOI:  10.1002/pmic.200500155 ;  PMID:  16400686
• Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification.   DOI:  10.1074/mcp.M700052-MCP200 ;  PMID:  17934214
• Balance between Cytosolic and Chloroplast Translation Affects Leaf Variegation.   DOI:  10.1104/pp.17.00673 ;  PMID:  29142022
• The composition and turnover of the Arabidopsis thaliana 80S cytosolic ribosome.   DOI:  10.1042/BCJ20200385 ;  PMID:  32744327
• Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources.   DOI:  10.1111/tpj.15667 ;  PMID:  35000252
• An updated nomenclature for plant ribosomal protein genes.   DOI:  10.1093/plcell/koac333 ;  PMID:  36423343
• Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification.   DOI:  10.1074/mcp.M700052-MCP200 ;  PMID:  17934214

Sequences: