Gene Details:
- Gene ID: AT5G27660
- Gene Symbol: AtPARK13, DEG14, PARK13
- Gene Name: Arabidopsis PARK13 homolog, degradation of periplasmic proteins 14
- Description: Trypsin family protein with PDZ domain-containing protein;(source:Araport11)
- TAIR Accession: locus:2143641
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0004252 — enables — serine-type endopeptidase activity
- GO:0034605 — acts upstream of or within — cellular response to heat
- GO:0008233 — enables — peptidase activity
- GO:0006508 — involved in — proteolysis
- GO:0005739 — located in — mitochondrion
- GO:0005634 — located in — nucleus
- GO:0051603 — acts upstream of or within — proteolysis involved in protein catabolic process
Function-related keywords:
Literature:
- The gene complement for proteolysis in the cyanobacterium Synechocystis sp. PCC 6803 and Arabidopsis thaliana chloroplasts. DOI: 10.1007/s00294-002-0309-8 ; PMID: 12185496
- Cross genome comparisons of serine proteases in Arabidopsis and rice. DOI: 10.1186/1471-2164-7-200 ; PMID: 16895613
- A heat-inducible transcription factor, HsfA2, is required for extension of acquired thermotolerance in Arabidopsis. DOI: 10.1104/pp.106.091322 ; PMID: 17085506
- Protease gene families in Populus and Arabidopsis. DOI: 10.1186/1471-2229-6-30 ; PMID: 17181860
- Genome-wide analysis of the RNA-DEPENDENT RNA POLYMERASE6/DICER-LIKE4 pathway in and tasiRNA-directed targeting. DOI: 10.1105/tpc.107.050062 ; PMID: 17400893
- Core genome responses involved in acclimation to high temperature. DOI: 10.1104/pp.107.112060 ; PMID: 18055584
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Deg proteases and their role in protein quality control and processing in different subcellular compartments of the plant cell. DOI: 10.1111/j.1399-3054.2011.01533.x ; PMID: 22008015
- The family of Deg/HtrA proteases in plants. DOI: 10.1186/1471-2229-12-52 ; PMID: 22520048
Sequences:
cDNA Sequence
- >AT5G27660.1
AGAAGAGCTGTATCATCTTCTAAAAGAAGCGAGCTTATTCGCATCATTTCTGTTGCTACTGCTACTTCTGGAATTTTATATGCTAGTACTAATCCAGATGCAAGAACTCGAGTATCGCTTGCTATACCTGAATCTGTTCGAGAATCTTTGTCGTTACTGCCTTGGCAGATTTCACCGGGTTTGATTCATCGTCCTGAGCAAAGCTTATTCGGAAATTTCGTGTTTTCTTCGAGAGTTAGTCCGAAATCAGAAGCACCTATAAATGATGAGAAGGGAGTTTCTGTTGAAGCTTCGGATAGTAGTTCGAAACCAAGTAATGGCTACTTAGGGAGAGATACTATAGCCAATGCGGCTGCTAGAATTGGACCAGCGGTTGTCAATCTTTCGGTTCCTCAGGGTTTCCATGGGATATCTATGGGGAAAAGTATCGGTTCTGGAACGATCATTGATGCTGATGGCACGATACTGACTTGCGCTCATGTTGTAGTTGATTTTCAGAACATTCGTCATTCTTCTAAAGGGAGGGTAGATGTGACGTTGCAAGATGGTAGGACGTTTGAGGGTGTGGTGGTGAACGCTGATTTACAATCCGACATTGCATTAGTGAAGATAAAGTCAAAGACGCCATTGCCAACTGCTAAACTTGGTTTTTCGAGTAAGCTTCGTCCTGGAGACTGGGTAATAGCGGTAGGTTGTCCTCTGTCTCTCCAGAACACAGTAACTGCTGGTATTGTCAGTTGTGTTGATCGCAAAAGCAGTGATTTGGGTTTAGGAGGCAAACATAGAGAGTATCTCCAAACAGACTGCTCGATCAATGCGGGAAACTCTGGTGGGCCTCTTGTAAATTTGGATGGGGAAGTGATTGGTGTTAATATCATGAAAGTTTTAGCTGCAGATGGTCTTGGATTTTCCGTGCCAATTGACTCGGTATCTAAAATCATCGAGCATTTCAAGAAGAGTGGTAGAGTTATTCGGCCATGGATTGGGCTCAAAATGGTCGAACTCAATAACTTGATCGTTGCTCAGCTAAAAGAACGAGACCCAATGTTTCCTGATGTCGAAAGAGGCGTTCTTGTTCCTACGGTGATTCCGGGATCACCGGCTGATCGAGCTGGCTTCAAACCAGGAGATGTTGTTGTGAGATTTGATGGGAAGCCGGTGATAGAGATAATGGACGACAGAGTTGGGAAGAGGATGCAAGTAGTTGTGGAAAGATCAAATAAAGAAAGGGTCACACTAGAAGTCATTCCTGAGGAGGCTAATCCAGACATGTGA - >AT5G27660.2
AGAAGAGCTGTATCATCTTCTAAAAGAAGCGAGCTTATTCGCATCATTTCTGTTGCTACTGCTACTTCTGGAATTTTATATGCTAGTACTAATCCAGATGCAAGAACTCGAGTATCGCTTGCTATACCTGAATCTGTTCGAGAATCTTTGTCGTTACTGCCTTGGCAGATTTCACCGGGTTTGATTCATCGTCCTGAGCAAAGCTTATTCGGAAATTTCGTGTTTTCTTCGAGAGTTAGTCCGAAATCAGAAGCACCTATAAATGATGAGAAGGGAGTTTCTGTTGAAGCTTCGGATAGTAGTTCGAAACCAAGTAATGGCTACTTAGGGAGAGATACTATAGCCAATGCGGCTGCTAGAATTGGACCAGCGGTTGTCAATCTTTCGGTTCCTCAGGGTTTCCATGGGATATCTATGGGGAAAAGTATCGGTTCTGGAACGATCATTGATGCTGATGGCACGATACTGACTTGCGCTCATGTTGTAGTTGATTTTCAGAACATTCGTCATTCTTCTAAAGGGAGGGTAGATGTGACGTTGCAAGATGGTAGGACGTTTGAGGGTGTGGTGGTGAACGCTGATTTACAATCCGACATTGCATTAGTGAAGATAAAGTCAAAGACGCCATTGCCAACTGCTAAACTTGGTTTTTCGAGTAAGCTTCGTCCTGGAGACTGGGTAATAGCGGTAGGTTGTCCTCTGTCTCTCCAGAACACAGTAACTGCTGGTATTGTCAGTTGTGTTGATCGCAAAAGCAGTGATTTGGGTTTAGGAGGCAAACATAGAGAGTATCTCCAAACAGACTGCTCGATCAATGCGGGAAACTCTGGTGGGCCTCTTGTAAATTTGGATGGGGAAGTGATTGGTGTTAATATCATGAAAGTTTTAGCTGCAGATGGTCTTGGATTTTCCGTGCCAATTGACTCGGTATCTAAAATCATCGAGCATTTCAAGAAGAGTGGTAGAGTTATTCGGCCATGGATTGGGCTCAAAATGGTCGAACTCAATAACTTGATCGTTGCTCAGCTAAAAGAACGAGACCCAATGTTTCCTGATGTCGAAAGAGGCGTTCTTGTTCCTACGGTGATTCCGGGATCACCGGCTGATCGAGCTGGCTTCAAACCAGGAGATGTTGTTGTGAGATTTGATGGGAAGCCGGTGATAGAGATAATGGACGACAGAGTTGGGAAGAGGATGCAAGTAGTTGTGGAAAGATCAAATAAAGAAAGGGTCACACTAGAAGTCATTCCTGAGGAGGCTAATCCAGACATGTGA
CDS Sequence
Protein Sequence