Information report for AT5G27620
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0005515 — enables — protein binding
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0006357 — involved in — regulation of transcription by RNA polymerase II
- GO:0005634 — located in — nucleus
- GO:0009637 — involved in — response to blue light
- GO:0004672 — enables — protein kinase activity
- GO:0000079 — involved in — regulation of cyclin-dependent protein serine/threonine kinase activity
- GO:1990069 — acts upstream of or within — stomatal opening
- GO:0009414 — acts upstream of or within — response to water deprivation
- GO:0005737 — located in — cytoplasm
- GO:0072593 — acts upstream of or within — reactive oxygen species metabolic process
- GO:0070985 — part of — transcription factor TFIIK complex
- GO:0010119 — acts upstream of or within — regulation of stomatal movement
- GO:2000070 — acts upstream of or within — regulation of response to water deprivation
- GO:0016538 — enables — cyclin-dependent protein serine/threonine kinase regulator activity
- GO:0009414 — involved in — response to water deprivation
- GO:0005634 — is active in — nucleus
- GO:0009637 — acts upstream of or within — response to blue light
Functional Keywords
Literature and News
- Genome-wide analysis of core cell cycle genes in Arabidopsis. DOI: 10.1105/tpc.010445 ; PMID: 11971144
- Rapid identification of Arabidopsis insertion mutants by non-radioactive detection of T-DNA tagged genes. DOI: 10.1046/j.1365-313x.2002.01416.x ; PMID: 12383089
- Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation. DOI: 10.1104/pp.104.057935 ; PMID: 15908605
- Diverse phosphoregulatory mechanisms controlling cyclin-dependent kinase-activating kinases in Arabidopsis. DOI: 10.1111/j.1365-313X.2006.02820.x ; PMID: 16856985
- Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. DOI: 10.1038/msb.2010.53 ; PMID: 20706207
- Systematic identification of functional plant modules through the integration of complementary data sources. DOI: 10.1104/pp.112.196725 ; PMID: 22589469
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Global analysis of the core cell cycle regulators of Arabidopsis identifies novel genes, reveals multiple and highly specific profiles of expression and provides a coherent model for plant cell cycle control. DOI: 10.1111/j.1365-313X.2004.02319.x ; PMID: 15686519
Gene Resources
- UniProt: A0A1P8BAW8
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BAW8
- EnsemblPlants: AT5G27620.2
- Gramene: AT5G27620.2
- ExpressionAtlas: AT5G27620
- InterPro: IPR006671, IPR013763, IPR031658
- PANTHER: PTHR10026
- SUPFAM: SSF47954
- Gene3D: 1.10.472.10
- SWISS-MODEL: A0A1P8BAW8
- Conserved Domain Database: cd20585, cd20586
Sequences
cDNA Sequence
- >AT5G27620.2
AAAGAACGTCGTTTCACCAACGTTTCTTCTTCCTCGCAAGTCTCAAAGCCAGGAACGATCTCGCCGTATGAGCAACTTCCGACATTAACACTGTATTGCTCTGCCGTACTCTCCTCTTTTTCCCTTCATACTCGTCTTCACATCTGAATTCCGACAAGATATTGCGTCTGCTCTCCTCTCTTCCCTCATTCTCGTCTTCTCATTACCAAAAACATCTTCTTCTCGTAGCTAACTCAATCCAATTCCAATCTCCATTCAAATCGAGCACCAGATAATTTTTTCTCCTAAATTCTAATATAAGCCCTAAAATTCAAAATTGAAATATCTATAGAATCTCCTTCCGATTCAGACGGATAATCGCCATCAACAGCGTGTGAATTCGATCAAAAATCTGAACTTTCCACAAAGAAATTCGAAAGCTCAGATTTTTCGATTTCGAAAATTTTGAAAACTCAGTTAATGGCGGATTTTCAGACATCAACACAACGGGCCAAGTGGATTTTCACTCCCCAGAAACTGGCAGAGAGATATAAAGCTGCTAACCAGAGGGCAGTGCAAATGCTGGAGAAGTGTGGAACAACTCAAGTTGAAGTAGATGCTAGTGGATCACTAACATATCCTAAAGATAAAGTTGGTTCAGGAGATCAAGCTGATAAGAAGCTTAAGCCTTTGAGTGCTGATGAAGAAAGGTTCATGAGAGCATTTTATGAGGCAAAGGTCCAAGAAGTGTGCAGTGCCTTTGCATTTCCTCACAAGATTCAGGCAACAGCCCTCCAATACTTTAAGAGATTTTATCTGCAATGGTCTGTTATGCAACATCATCCAAAAGAGATAATGTTAACCTGTGTGTATGCAGCTTGTAAAATAGAGGAGAATCATGTATCTGCTGAGGAAATTGGGAAAGGGATTAACCAAGATCACCGAATAATTCTCAAGTACGAGATGGCTGTTCTTCAGAGTTTGGAATTTGATCTGATTGTTTATGCACCGTATCGTGCAATCGAAGGTTTTGTCAACAACATGGAGGAATTTCTTCAAGCTAGAGATGATGAAATCCAAAAACTAGAGAGTTTGCTCAAAGGGGCGACAGCAGAAGCCGATAAAGTTATGCTCACAGATGCTCCACTCCTCTTTCCTCCTGGCCAGTTGGCATTGGCGTCGTTACGTATTGCAAATGGGGTTCTTGGAGTGATTGACTTTGATAGGTACCTAGAGAACATTGTTTCTCAACCGAACTCTGAGCACACGACTTCAGAGCTTACAAAGTTACTTGATAACATCGAATATTTGGTAAAGAACTACAAGTGCCCAAGTGAAAAGGACATGAAGCATATCAACCGGAAGCTAAAATCTTGTCTAGGACATAGTTCTTCACATGACGAGTACACTAACAACCTCTCTTCTACTAATTCTTTTAACCACTATATATATTTCATAAGCTTTGCTTCTGCAATTGACTCCCTTCTCTATTTATCTTCATCAGGAGTAAGAAACGGGAGAAGAGATCAAAACACAAGTCCCATAGGAGCTCCAATGATACACCAAACGGGGCACCGCCACCCATAGGTTGAGTTTCTCGTACTGCCATTAGCAATTCTTCCTTTGCACTTTGGTTTAGTTTTAATCTTATTGAATGAGAAATTCGTCTTTTATAGTTTCTTCCCCGTTGTTGTTCTTACTAGTAAATTTGAGCAGATTATGTATAACAATGATATTGGCCATAAGTTTTGTTTATTCTGAAGATGTTAATGAATTTATAACA - >AT5G27620.3
AAAGAACGTCGTTTCACCAACGTTTCTTCTTCCTCGCAAGTCTCAAAGCCAGGAACGATCTCGCCGTATGAGCAACTTCCGACATTAACACTGTATTGCTCTGCCGTACTCTCCTCTTTTTCCCTTCATACTCGTCTTCACATCTGAATTCCGACAAGATATTGCGTCTGCTCTCCTCTCTTCCCTCATTCTCGTCTTCTCATTACCAAAAACATCTTCTTCTCGTAGCTAACTCAATCCAATTCCAATCTCCATTCAAATCGAGCACCAGATAATTTTTTCTCCTAAATTCTAATATAAGCCCTAAAATTCAAAATTGAAATATCTATAGAATCTCCTTCCGATTCAGACGGATAATCGCCATCAACAGCGTGTGAATTCGATCAAAAATCTGAACTTTCCACAAAGAAATTCGAAAGCTCAGATTTTTCGATTTCGAAAATTTTGAAAACTCAGTTAATGGCGGATTTTCAGACATCAACACAACGGGCCAAGTGGATTTTCACTCCCCAGAAACTGGCAGAGAGATATAAAGCTGCTAACCAGAGGGCAGTGCAAATGCTGGAGAAGTGTGGAACAACTCAAGTTGAAGTAGATGCTAGTGGATCACTAACATATCCTAAAGATAAAGTTGGTTCAGGAGATCAAGCTGATAAGAAGCTTAAGCCTTTGAGTGCTGATGAAGAAAGGTTCATGAGAGCATTTTATGAGGCAAAGGTCCAAGAAGTGTGCAGTGCCTTTGCATTTCCTCACAAGATTCAGGCAACAGCCCTCCAATACTTTAAGAGATTTTATCTGCAATGGTCTGTTATGCAACATCATCCAAAAGAGATAATGTTAACCTGTGTGTATGCAGCTTGTAAAATAGAGGAGAATCATGTATCTGCTGAGGAAATTGGGAAAGGGATTAACCAAGATCACCGAATAATTCTCAAGTACGAGATGGCTGTTCTTCAGAGTTTGGAATTTGATCTGATTGTTTATGCACCGTATCGTGCAATCGAAGGTTTTGTCAACAACATGGAGGAATTTCTTCAAGCTAGAGATGATGAAATCCAAAAACTAGAGAGTTTGCTCAAAGGGGCGACAGCAGAAGCCGATAAAGTTATGCTCACAGATGCTCCACTCCTCTTTCCTCCTGGCCAGTTGGCATTGGCGTCGTTACGTATTGCAAATGGGGTTCTTGGAGTGATTGACTTTGATAGGTACCTAGAGAACATTGTTTCTCAACCGAACTCTGAGCACACGACTTCAGAGCTTACAAAGTTACTTGATAACATCGAATATTTGGTAAAGAACTACAAGTGCCCAAGTGAAAAGGACATGAAGCATATCAACCGGAAGCTAAAATCTTGTCTAGGACATAGTTCTTCACATGACGAGTACACTAACAACCTCTCTTCTACTAATTCTTTTAACCACTATATATATTTCATAAGCTTTGCTTCTGCAATTGACTCCCTTCTCTATTTATCTTCATCAGGAGTAAGAAACGGGAGAAGAGATCAAAACACAAGTCCCATAGGAGCTCCAATGATACACCAAACGGGGCACCGCCACCCATAGGTTGAGTTTCTCGTACTGCCATTAGCAATTCTTCCTTTGCACTTTGGTTTAGTTTTAATCTTATTGAATGAGAAATTCGTCTTTTATAGTTTCTTCCCCGTTGTTGTTCTTACTAGTAAATTTGAGCAGATTATGTATAACAATGATATTGGCCATAAGTTTTGTTTATTCTGAAGATGTTAATGAATTTATAACA - >AT5G27620.1
AAAGAACGTCGTTTCACCAACGTTTCTTCTTCCTCGCAAGTCTCAAAGCCAGGAACGATCTCGCCGTATGAGCAACTTCCGACATTAACACTGTATTGCTCTGCCGTACTCTCCTCTTTTTCCCTTCATACTCGTCTTCACATCTGAATTCCGACAAGATATTGCGTCTGCTCTCCTCTCTTCCCTCATTCTCGTCTTCTCATTACCAAAAACATCTTCTTCTCGTAGCTAACTCAATCCAATTCCAATCTCCATTCAAATCGAGCACCAGATAATTTTTTCTCCTAAATTCTAATATAAGCCCTAAAATTCAAAATTGAAATATCTATAGAATCTCCTTCCGATTCAGACGGATAATCGCCATCAACAGCGTGTGAATTCGATCAAAAATCTGAACTTTCCACAAAGAAATTCGAAAGCTCAGATTTTTCGATTTCGAAAATTTTGAAAACTCAGTTAATGGCGGATTTTCAGACATCAACACAACGGGCCAAGTGGATTTTCACTCCCCAGAAACTGGCAGAGAGATATAAAGCTGCTAACCAGAGGGCAGTGCAAATGCTGGAGAAGTGTGGAACAACTCAAGTTGAAGTAGATGCTAGTGGATCACTAACATATCCTAAAGATAAAGTTGGTTCAGGAGATCAAGCTGATAAGAAGCTTAAGCCTTTGAGTGCTGATGAAGAAAGGTTCATGAGAGCATTTTATGAGGCAAAGGTCCAAGAAGTGTGCAGTGCCTTTGCATTTCCTCACAAGATTCAGGCAACAGCCCTCCAATACTTTAAGAGATTTTATCTGCAATGGTCTGTTATGCAACATCATCCAAAAGAGATAATGTTAACCTGTGTGTATGCAGCTTGTAAAATAGAGGAGAATCATGTATCTGCTGAGGAAATTGGGAAAGGGATTAACCAAGATCACCGAATAATTCTCAAGTACGAGATGGCTGTTCTTCAGAGTTTGGAATTTGATCTGATTGTTTATGCACCGTATCGTGCAATCGAAGGTTTTGTCAACAACATGGAGGAATTTCTTCAAGCTAGAGATGATGAAATCCAAAAACTAGAGAGTTTGCTCAAAGGGGCGACAGCAGAAGCCGATAAAGTTATGCTCACAGATGCTCCACTCCTCTTTCCTCCTGGCCAGTTGGCATTGGCGTCGTTACGTATTGCAAATGGGGTTCTTGGAGTGATTGACTTTGATAGGTACCTAGAGAACATTGTTTCTCAACCGAACTCTGAGCACACGACTTCAGAGCTTACAAAGTTACTTGATAACATCGAATATTTGGTAAAGAACTACAAGTGCCCAAGTGAAAAGGACATGAAGCATATCAACCGGAAGCTAAAATCTTGTCTAGGACATAGTTCTTCACATGACGAGTACACTAACAACCTCTCTTCTACTAATTCTTTTAACCACTATATATATTTCATAAGCTTTGCTTCTGCAATTGACTCCCTTCTCTATTTATCTTCATCAGGAGTAAGAAACGGGAGAAGAGATCAAAACACAAGTCCCATAGGAGCTCCAATGATACACCAAACGGGGCACCGCCACCCATAGGTTGAGTTTCTCGTACTGCCATTAGCAATTCTTCCTTTGCACTTTGGTTTAGTTTTAATCTTATTGAATGAGAAATTCGTCTTTTATAGTTTCTTCCCCGTTGTTGTTCTTACTAGTAAATTTGAGCAGATTATGTATAACAATGATATTGGCCATAAGTTTTGTTTATTCTGAAGATGTTAATGAATTTATAACA
CDS Sequence
Protein Sequence