Information report for AT5G27600
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000014 — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0005777 — located in — peroxisome
- GO:0005783 — is active in — endoplasmic reticulum
- GO:0005515 — enables — protein binding
- GO:0009651 — acts upstream of or within — response to salt stress
- GO:0004467 — enables — long-chain fatty acid-CoA ligase activity
- GO:0010193 — acts upstream of or within — response to ozone
- GO:0001676 — acts upstream of or within — long-chain fatty acid metabolic process
- GO:0006631 — involved in — fatty acid metabolic process
- GO:0016020 — is active in — membrane
- GO:0009536 — located in — plastid
- GO:0005634 — located in — nucleus
Functional Keywords
- root , rosette leaf , root , seed , plant sperm cell
Literature and News
- Arabidopsis contains nine long-chain acyl-coenzyme a synthetase genes that participate in fatty acid and glycerolipid metabolism. DOI: 10.1104/pp.003269 ; PMID: 12177484
- Two long-chain acyl-CoA synthetases from Arabidopsis thaliana involved in peroxisomal fatty acid beta-oxidation. DOI: 10.1046/j.1365-313x.2002.01405.x ; PMID: 12366803
- Arabidopsis contains a large superfamily of acyl-activating enzymes. Phylogenetic and biochemical analysis reveals a new class of acyl-coenzyme a synthetases. DOI: 10.1104/pp.103.020552 ; PMID: 12805634
- Functional differentiation of peroxisomes revealed by expression profiles of peroxisomal genes in Arabidopsis thaliana. DOI: 10.1093/pcp/pcg173 ; PMID: 14701923
- AraPerox. A database of putative Arabidopsis proteins from plant peroxisomes. DOI: 10.1104/pp.104.043695 ; PMID: 15333753
- Storage reserve mobilization in germinating oilseeds: Arabidopsis as a model system. DOI: 10.1042/BST0330380 ; PMID: 15787611
- Detoxification and transcriptome response in Arabidopsis seedlings exposed to the allelochemical benzoxazolin-2(3H)-one. DOI: 10.1074/jbc.M500694200 ; PMID: 15824099
- AtLACS7 interacts with the TPR domains of the PTS1 receptor PEX5. DOI: 10.1016/j.abb.2005.09.003 ; PMID: 16256065
- Analysis of the role of COMATOSE and peroxisomal beta-oxidation in the determination of germination potential in Arabidopsis. DOI: 10.1093/jxb/erl045 ; PMID: 16844736
- Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. DOI: 10.1105/tpc.107.050989 ; PMID: 17951448
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Novel proteins, putative membrane transporters, and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes. DOI: 10.1104/pp.108.129999 ; PMID: 18931141
- Systematic identification of functional plant modules through the integration of complementary data sources. DOI: 10.1104/pp.112.196725 ; PMID: 22589469
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Arabidopsis SFAR4 is a novel GDSL-type esterase involved in fatty acid degradation and glucose tolerance. DOI: 10.1186/s40529-015-0114-6 ; PMID: 28510842
- Brassica napus cDNAs encoding fatty acyl-CoA synthetase. DOI: 10.1023/a:1005780529307 ; PMID: 9106514
- Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. DOI: 10.1105/tpc.107.050989 ; PMID: 17951448
Gene Resources
Sequences
cDNA Sequence
- >AT5G27600.1
ATTTTATTACTATACTAGTAGATTTGTGACGTCATTGTTTTAAAGTTGAATTTTTATAAAATGGTAATTAATCGGTTTATTTCGTATATTCCTGAAGACATTTTTTCTGAAGAAAGAAGAAAAGATGGAATTTGCTTCGCCGGAACAACGTCGTCTCGAAACCATTCGATCTCACATCGATACTTCTCCGACCAACGATCAATCATCATCTCTATTCCTCAACGCCACCGCTTCTTCTGCTTCACCTTTCTTTAAAGAGGATAGCTACAGTGTTGTGCTTCCAGAAAAGCTTGATACTGGAAAATGGAATGTCTACAGATCTAAAAGATCGCCTACGAAACTCGTTAGTAGGTTCCCGGATCATCCTGAAATCGGGACTTTACATGACAATTTTGTACATGCTGTTGAAACATATGCTGAAAACAAGTATCTTGGTACACGAGTTCGGTCCGATGGAACCATTGGAGAGTATTCATGGATGACATATGGAGAAGCAGCGTCTGAGCGACAAGCCATTGGTTCAGGACTCTTGTTTCATGGAGTTAACCAAGGAGATTGCGTTGGACTCTATTTTATTAACAGACCAGAGTGGTTGGTTGTGGATCATGCTTGTGCAGCATATTCATTTGTCTCTGTTCCTTTATATGATACACTTGGTCCAGACGCTGTTAAGTTTGTGGTGAATCATGCTAATCTGCAAGCTATATTTTGTGTACCACAAACCTTGAATATTTTGCTAAGCTTCCTAGCGGAAATCCCATCCATTCGTCTCATTGTGGTGGTGGGAGGGGCTGATGAGCATTTGCCATCACTTCCTCGAGGAACTGGAGTCACAATTGTATCATACCAAAAGCTATTGAGTCAGGGTCGAAGTAGCTTACATCCATTTTCGCCTCCAAAGCCAGAAGACATTGCAACCATATGCTACACAAGTGGAACCACAGGAACACCAAAGGGTGTTGTGTTGACTCATGGAAACTTGATCGCGAATGTCGCTGGTTCCAGTGTGGAAGCAGAATTCTTTCCTTCAGATGTTTACATATCATATCTTCCTTTGGCGCACATATATGAACGTGCAAATCAGATTATGGGGGTGTATGGTGGTGTTGCTGTCGGTTTCTATCAGGGGGATGTCTTCAAGCTGATGGATGATTTTGCTGTGTTAAGACCAACAATATTCTGTAGTGTCCCTCGCTTATATAATCGAATATATGATGGCATTACAAGTGCCGTAAAATCATCTGGGGTTGTGAAAAAAAGGCTTTTCGAAATTGCCTATAACTCAAAGAAGCAAGCGATCATTAATGGGCGGACTCCTTCTGCATTTTGGGACAAGCTGGTGTTCAACAAAATAAAAGAAAAGCTTGGTGGACGGGTTCGGTTTATGGGGTCTGGTGCTTCTCCTTTGTCACCTGATGTCATGGATTTCTTGAGAATATGCTTTGGATGTTCGGTGCGTGAAGGGTATGGTATGACCGAGACTTCTTGTGTCATAAGTGCTATGGATGATGGTGACAATTTATCTGGCCATGTCGGTTCCCCTAATCCAGCTTGCGAGGTAAAACTTGTGGATGTTCCCGAAATGAATTACACATCAGACGATCAACCATACCCACGTGGTGAAATCTGTGTAAGAGGACCAATCATCTTCAAAGGCTACTACAAAGATGAAGAACAAACGAGAGAAATTCTTGATGGAGATGGCTGGCTACACACAGGAGATATCGGGTTGTGGTTACCTGGTGGTCGGCTCAAGATCATAGACAGGAAGAAGAACATATTTAAGTTGGCGCAAGGAGAATATATAGCACCAGAGAAGATCGAAAATGTTTATACCAAATGTAGATTCGTTTCGCAGTGTTTCATTCACGGTGATAGCTTCAATTCCTCTCTAGTAGCTATAGTTTCAGTCGACCCCGAAGTTATGAAAGATTGGGCTGCATCAGAAGGCATCAAGTATGAGCATCTAGGACAGCTCTGTAACGATCCAAGAGTGCGAAAGACTGTTCTTGCTGAGATGGATGACCTTGGAAGAGAAGCTCAGTTGAGAGGGTTTGAGTTTGCAAAGGCTGTGACTTTGGTGCCAGAACCATTCACCTTGGAGAATGGACTTCTCACACCAACATTCAAGATAAAGAGACCTCAAGCAAAAGCCTACTTTGCAGAAGCAATTAGCAAAATGTATGCGGAAATCGCAGCCTCGAACCCCATTCCTTCTAAACTGTGATGCTTTTTGCTTTGCTTAAAAGTGTTTCTTTTTTTTTGTATTACAAAGGTAATTGTAGAACTGTTAAAAGATCGGATTAGGATGAGGTAGATCGATCATTTGAAATAAAACAGATTCATGGTGTAATTTTCTTTGATACTGTTTTCCAGAATAAAGGAAGCAGACTATGTCCTAATCCTGAAATGGATGATGAGTGTGGTCATAAGTTTGAGAAACCAGTGCATGTCCG
CDS Sequence
Protein Sequence