Gene Details:
- Gene ID: AT5G27540
- Gene Symbol: emb2473, MIRO1
- Gene Name: embryo defective 2473, MIRO-related GTP-ase 1
- Description: MIRO-related GTP-ase 1;(source:Araport11)
- TAIR Accession: locus:2146385
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Gene Ontology:
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0003924 — enables — GTPase activity
- GO:0005739 — located in — mitochondrion
- GO:0009860 — acts upstream of or within — pollen tube growth
Germplasm Phenotype:
- miro1-1 — Embryo lethal. Embryos arrest between zygote and four cell stage. Abnormal male transmission due to defects in pollen germination and pollen tube growth. Abnormal mitochondrial morphology.
Function-related keywords:
Literature:
- Analysis of EF-hand-containing proteins in Arabidopsis. DOI: 10.1186/gb-2002-3-10-research0056 ; PMID: 12372144
- Identification and characterisation of a melon genomic region containing a resistance gene cluster from a constructed BAC library. Microcolinearity between Cucumis melo and Arabidopsis thaliana. DOI: 10.1023/a:1022573230486 ; PMID: 12678558
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Identification of genes required for embryo development in Arabidopsis. DOI: 10.1104/pp.104.045179 ; PMID: 15266054
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- High rate of recent intron gain and loss in simultaneously duplicated Arabidopsis genes. DOI: 10.1093/molbev/msl017 ; PMID: 16720694
- An expressed sequence tag (EST) library from developing fruits of an Hawaiian endemic mint (Stenogyne rugosa, Lamiaceae): characterization and microsatellite markers. DOI: 10.1186/1471-2229-6-16 ; PMID: 16928278
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Alteration of mitochondrial protein complexes in relation to metabolic regulation under short-term oxidative stress in Arabidopsis seedlings. DOI: 10.1016/j.phytochem.2010.11.003 ; PMID: 21146842
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. DOI: 10.1016/j.phytochem.2004.03.028 ; PMID: 15276431
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
Sequences:
cDNA Sequence
- >AT5G27540.2
ACTAGACTAAACACAGACAAGGTAAAAAAAAAAAACAGCTTACCAAATTTTTCTCCTCCTTCACGGCAAATCGTCACCGCCACATTATCTCCCAAACTAAGAATCTAGGGTTTTCTAAGGGTTTTTAATCTTCGTCCTTCTCTCCTTCTCCAGTTTTAGGTTTCAGGTTTATCTCTCGTTTCTTTCATCGAATCTTTTGATCTTTAGTTTCAGATGGCGAGATACGCTGCTGGTGCGGTTGATTGTCCTGGTTCTCCCAAATCTGTGCGAATCGTTGTGGTTGGTGATAAGGGCACTGGAAAATCAAGCTTGATTGTTGCTGCAGCCACTGATTCTTTCCCTCCCAATGTCCCTCCTGTTTTGCCTGATTACAAGTTGCCTATTGAATTCTTCCCTGATGGTATACCCGTCACCATTGTCGACACTTCCTCGAGGCCAGAAGATAGGGACATTGTTGCTGAGGAATTGAAGCGCGCAGATGCAGTAGTTTTGACATATGCCTGTGATCGACCTGAGACTCTCGAACGTTTGAGTGAATACTGGCTTCCAGAGCTTCGGCGATTAGAGGTAAAAATTCCTATTATCGTAGCAGGATGTAAGCTTGACTTCAGAGACGACAATAACCAGGTCAGCCTCGAACAAGTGATGTCACCTATAATGCAGCAGTTTCGGGAGATAGAGACTTGTATCGAGTGTTCTGCCCTGAAGCAACTCCAGGCACAAGAAGTTTTCTATTATGCACAAAAGACTGTCCTTCACCCAACAGGACCTCTGTTTGATCAAGATTCCCAGGCACTGAAACCCCGGTGTGTAAGGGCATTGAAGCGTATCTTTATACTCTGTGATCATGACAGAGATGGTGCTCTTAGCGAGGCTGAGTTAAATGATTTTCAGGTCAAGTGTTTCCATGCACCATTGCAGCCTTCTGAAATTGAAGGTGTTAAGAGGGTTGTGCAAGAAAAGTTGCCAGAAGGTGTGAATGAAAGAGGACTGACAGTCACTGGCTTCCTATTTTTACATGCACTTTTTATTGAGAAAGGGAGGCTTGAGACTACGTGGACTGTACTCAGGAAGTTTGGGTATAATAATGATATAAGACTTGCTGAAGAATTGCTTCCATCTGCAATATTCAAGCGAGCTCCTGATCAGAGCTTTGAGTTGACAAATGCAGCAATCGATTTCCTGAAAGGAATGTATATGTTGTTTGATGACGACCAGGATAACAATCTGAGACCTCAAGAGATCGAGGATCTTTTTTCAACTGCACCTGAAAGTCCATGGAAGGAAGCTCCTTATGAAGATGCTGCGGAAAAAACTGCCCTTGGAGGACTATCATTTGACGCTTTCCTGTCAATGTGGTCACTGATGACACTATTAGAACCGGCTCGGAGTGTGGAGAATTTGATTTACATTGGATTCCCGGGTGATCCATCGACTGCCATTCGTGTTACTAGGAGAAGACGTTTAGATCGCAAAAAGCAGCAATGTGAACGAAAAGTTTTCCAGTGCTTTGTTTTTGGACCTAATAATGCTGGAAAATCTGCATTGCTGAATTGCTTTCTTGGAAGGTCATATACTGATAACCAGGAATCAACTACTGATGAGCGTTATGCAGTAAATATGGTCGATGAATCGGGTGCTAAGAAAACTCTTATCATGAGGGAAATTCCAGAAGATGGAGTTCAAGGGCTATTTTCATCCAAGGAATCCTTAGCTGCATGTGACATAGCTGTCTTCGTGTATGACAGTTCTGATGAGTCGTCATGGAAGAGAGCGACCCAGTTGCTTGTAGAAGTTGCAAATTATGGTGAGGCCACTGGGTATGAGGTCCCTTGCCTCATGGTTTCAGCAAAAGACGATCTTGATTCATCTCCTATTTCCATACAAGAATCCACCAGGATGACACAAGATATGGGAATAGAGCCTCCGGTATCAATCAGCTCCAAATTGGGGGATTTCAACAATTTATTCCGCAAAATCTTAACTGCAGCACAACATCCTCATTTGAGCATTCCAGAGACCGAAGCAGGCAAAAGCCGCAAACATTACAACAGGCTAATCAACCGCTCTCTTATGGCCGTTTCCATTGGTGCTGCTGCTGTGGTCGTTGGGCTGGCTGCATACCGTGTGTATGCCACAAGAAAGAGCTCGTCTGCCTGAGAAGATTGAGAATGAACAATCCAATCTCTTAAGGTATGAACACGGAAAGAGGATAGCAAATCTCGTGTACTGAGTTTGTTTATCGTTCTCAAGGTTTTACAACTTGATCCAGAGTACTGTTGAGTACTGTTCTTAGAAGTTTAATGGAAATGGGCTTTGTTTGAAGTAATTGTGGAAGAAGATCTGTAGCAAACACAAACATTTAGGGACAAGATAAAAAGAGAACATAGTCAATAGACATTGTGTTGAATTTCAATAACAATAGAACTTTGTCTCCTCGATGTTGTTAATCTTGCTCACGTTTGCTCTGTTCTCGGAATTAACCAGCAACACTTTAACATC - >AT5G27540.1
ACTAGACTAAACACAGACAAGGTAAAAAAAAAAAACAGCTTACCAAATTTTTCTCCTCCTTCACGGCAAATCGTCACCGCCACATTATCTCCCAAACTAAGAATCTAGGGTTTTCTAAGGGTTTTTAATCTTCGTCCTTCTCTCCTTCTCCAGTTTTAGGTTTCAGGTTTATCTCTCGTTTCTTTCATCGAATCTTTTGATCTTTAGTTTCAGATGGCGAGATACGCTGCTGGTGCGGTTGATTGTCCTGGTTCTCCCAAATCTGTGCGAATCGTTGTGGTTGGTGATAAGGGCACTGGAAAATCAAGCTTGATTGTTGCTGCAGCCACTGATTCTTTCCCTCCCAATGTCCCTCCTGTTTTGCCTGATTACAAGTTGCCTATTGAATTCTTCCCTGATGGTATACCCGTCACCATTGTCGACACTTCCTCGAGGCCAGAAGATAGGGACATTGTTGCTGAGGAATTGAAGCGCGCAGATGCAGTAGTTTTGACATATGCCTGTGATCGACCTGAGACTCTCGAACGTTTGAGTGAATACTGGCTTCCAGAGCTTCGGCGATTAGAGGTAAAAATTCCTATTATCGTAGCAGGATGTAAGCTTGACTTCAGAGACGACAATAACCAGGTCAGCCTCGAACAAGTGATGTCACCTATAATGCAGCAGTTTCGGGAGATAGAGACTTGTATCGAGTGTTCTGCCCTGAAGCAACTCCAGGCACAAGAAGTTTTCTATTATGCACAAAAGACTGTCCTTCACCCAACAGGACCTCTGTTTGATCAAGATTCCCAGGCACTGAAACCCCGGTGTGTAAGGGCATTGAAGCGTATCTTTATACTCTGTGATCATGACAGAGATGGTGCTCTTAGCGAGGCTGAGTTAAATGATTTTCAGGTCAAGTGTTTCCATGCACCATTGCAGCCTTCTGAAATTGAAGGTGTTAAGAGGGTTGTGCAAGAAAAGTTGCCAGAAGGTGTGAATGAAAGAGGACTGACAGTCACTGGCTTCCTATTTTTACATGCACTTTTTATTGAGAAAGGGAGGCTTGAGACTACGTGGACTGTACTCAGGAAGTTTGGGTATAATAATGATATAAGACTTGCTGAAGAATTGCTTCCATCTGCAATATTCAAGCGAGCTCCTGATCAGAGCTTTGAGTTGACAAATGCAGCAATCGATTTCCTGAAAGGAATGTATATGTTGTTTGATGACGACCAGGATAACAATCTGAGACCTCAAGAGATCGAGGATCTTTTTTCAACTGCACCTGAAAGTCCATGGAAGGAAGCTCCTTATGAAGATGCTGCGGAAAAAACTGCCCTTGGAGGACTATCATTTGACGCTTTCCTGTCAATGTGGTCACTGATGACACTATTAGAACCGGCTCGGAGTGTGGAGAATTTGATTTACATTGGATTCCCGGGTGATCCATCGACTGCCATTCGTGTTACTAGGAGAAGACGTTTAGATCGCAAAAAGCAGCAATGTGAACGAAAAGTTTTCCAGTGCTTTGTTTTTGGACCTAATAATGCTGGAAAATCTGCATTGCTGAATTGCTTTCTTGGAAGGTCATATACTGATAACCAGGAATCAACTACTGATGAGCGTTATGCAGTAAATATGGTCGATGAATCGGGTGCTAAGAAAACTCTTATCATGAGGGAAATTCCAGAAGATGGAGTTCAAGGGCTATTTTCATCCAAGGAATCCTTAGCTGCATGTGACATAGCTGTCTTCGTGTATGACAGTTCTGATGAGTCGTCATGGAAGAGAGCGACCCAGTTGCTTGTAGAAGTTGCAAATTATGGTGAGGCCACTGGGTATGAGGTCCCTTGCCTCATGGTTTCAGCAAAAGACGATCTTGATTCATCTCCTATTTCCATACAAGAATCCACCAGGATGACACAAGATATGGGAATAGAGCCTCCGGTATCAATCAGCTCCAAATTGGGGGATTTCAACAATTTATTCCGCAAAATCTTAACTGCAGCACAACATCCTCATTTGAGCATTCCAGAGACCGAAGCAGGCAAAAGCCGCAAACATTACAACAGGCTAATCAACCGCTCTCTTATGGCCGTTTCCATTGGTGCTGCTGCTGTGGTCGTTGGGCTGGCTGCATACCGTGTGTATGCCACAAGAAAGAGCTCGTCTGCCTGAGAAGATTGAGAATGAACAATCCAATCTCTTAAGGTATGAACACGGAAAGAGGATAGCAAATCTCGTGTACTGAGTTTGTTTATCGTTCTCAAGGTTTTACAACTTGATCCAGAGTACTGTTGAGTACTGTTCTTAGAAGTTTAATGGAAATGGGCTTTGTTTGAAGTAATTGTGGAAGAAGATCTGTAGCAAACACAAACATTTAGGGACAAGATAAAAAGAGAACATAGTCAATAGACATTGTGTTGAATTTCAATAACAATAGAACTTTGTCTCCTCGATGTTGTTAATCTTGCTCACGTTTGCTCTGTTCTCGGAATTAACCAGCAACACTTTAACATC
CDS Sequence
Protein Sequence