Information report for AT5G27450
Gene Details
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Functional Descriptions
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0009049 — inflorescence — inflorescencia (Spanish, exact), 花序 (Japanese, exact), Triticeae spike (narrow)
- PO:0009062 — gynoecium — ginoecio (Spanish, exact), gynaecium (exact), gynoecia (exact, plural), 雌蕊群 (Japanese, exact), Poaceae gynoecium (narrow), Zea gynoecium (narrow), apocarpous gynoecium (narrow), gynoecium of ear floret (narrow), gynoecium of lower floret of pedicellate spikelet of ear (narrow), gynoecium of lower floret of pedicellate spikelet of tassel (narrow), gynoecium of lower floret of sessile spikelet of ear (narrow), gynoecium of lower floret of sessile spikelet of tassel (narrow), gynoecium of tassel floret (narrow), gynoecium of upper floret of pedicellate spikelet of ear (narrow), gynoecium of upper floret of pedicellate spikelet of tassel (narrow), gynoecium of upper floret of sessile spikelet of ear (narrow), gynoecium of upper floret of sessile spikelet of tassel (narrow), syncarpous gynoecium (narrow), pistil (broad)
- PO:0009066 — anther — antera (Spanish, exact), 半葯,花粉のう (Japanese, exact), Poaceae anther (narrow), Zea anther (narrow)
- PO:0009067 — filament — filamento (Spanish, exact), 花糸 (Japanese, exact), Poaceae filament (narrow), Zea filament (narrow)
- PO:0025074 — embryo sac — saco embrionario (Spanish, exact), 胚嚢 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
- fruit , root , vascular leaf , stamen , sepal , petal , stem , inflorescence , gynoecium , anther , filament , embryo sac , root , plant sperm cell
Literature and News
- Identification and characterisation of a melon genomic region containing a resistance gene cluster from a constructed BAC library. Microcolinearity between Cucumis melo and Arabidopsis thaliana. DOI: 10.1023/a:1022573230486 ; PMID: 12678558
- Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism. DOI: 10.1023/a:1023005504702 ; PMID: 12777052
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism. DOI: 10.1023/a:1023005504702 ; PMID: 12777052
Gene Resources
- UniProt: A0A178UNV0
- EMBL: CACSHJ010000096, LR881470, LUHQ01000005
- AlphaFoldDB: A0A178UNV0
- EnsemblPlants: AT5G27450.1, AT5G27450.2, AT5G27450.3
- Gramene: AT5G27450.1, AT5G27450.2, AT5G27450.3
- KEGG: ath:AT5G27450
- Orthologous matrix: LMDFNHG
- ExpressionAtlas: AT5G27450
- InterPro: IPR006203, IPR006204, IPR006205
- PANTHER: PTHR43290, PTHR43290:SF2
- SUPFAM: SSF54211, SSF55060
- PROSITE: PS00627
- Gene3D: 3.30.230.10, 3.30.70.890
- OrthoDB: A0A178UNV0
- SWISS-MODEL: A0A178UNV0
Sequences
cDNA Sequence
- >AT5G27450.3
AACACGATTCTCGTTGGCTTCAGACATTTTCCATCTTCTAGGTTTCTTTCTTTCTCAGCAATTTCCAGGAAAATGGAAGTGAAAGCTAGAGCTCCTGGGAAGATCATACTTGCAGGGGAACACGCTGTTGTTCATGGATCCACCGCTGTAGCTGCCGCCATTGATCTCTACACTTACGTTACTCTCCGCTTTCCTCTTCCATCAGCTGAGAACAATGATAGGCTTACACTTCAGCTCAAGGACATTTCCTTGGAGTTTTCATGGTCCTTAGCCAGAATCAAAGAAGCGATTCCTTATGATTCAAGCACTCTCTGCCGTTCTACGCCGGCTTCATGTTCAGAGGAGACCCTTAAATCAATTGCAGTTTTGGTTGAAGAGCAAAATCTTCCAAAGGAAAAGATGTGGCTCTCCTCTGGGATCTCCACGTTTCTCTGGTTATACACCAGAATTATAGGGTTCAATCCGGCTACAGTAGTCATTAACTCTGAGCTTCCATACGGGTCTGGCCTCGGTTCATCAGCAGCTTTATGTGTAGCTCTCACAGCTGCTCTCCTTGCTTCTTCTATTTCAGAGAAAACCCGTGGTAACGGTTGGTCATCTCTCGATGAAACCAATCTTGAGTTGCTAAATAAATGGGCTTTCGAAGGCGAAAAGATCATCCATGGGAAACCTTCTGGGATAGACAACACCGTCAGTGCATACGGCAACATGATCAAGTTCTGCTCAGGCGAGATAACTCGGTTACAATCCAACATGCCTCTGAGAATGCTAATTACCAACACTAGAGTTGGGCGAAACACAAAAGCTCTGGTCTCTGGTGTGTCACAGAGAGCGGTAAGACATCCTGATGCGATGAAGTCAGTGTTCAACGCCGTGGATTCTATAAGCAAAGAGCTCGCTGCGATCATTCAGTCTAAAGACGAGACCTCAGTTACAGAAAAAGAAGAGAGAATAAAAGAACTCATGGAGATGAACCAAGGTCTGCTCCTGTCAATGGGGGTTAGCCACAGCTCAATCGAGGCTGTGATTCTAACCACGGTCAAGCACAAGCTTGTCTCCAAACTTACAGGAGCTGGTGGCGGCGGCTGCGTCCTCACTCTATTACCAACCGGGACGGTGGTGGACAAAGTGGTGGAGGAGCTCGAGTCCAGCGGTTTTCAGTGTTTCACGGCATTGATTGGTGGTAACGGAGCTCAGATTTGCTATTGATCAGGTCGGAAAAATCATATTTGGCCTCTCACCATTCTTAAACTTGCTGACGTGTACGTCAAGAAGGCTGCAATTAGAAATTCAAAGAGTCGATTTTTTCTTATAAATGATGTGTTGAATGTAAAATTGCTTTATTATTATACCATGTGACAAATAATTGAAAAAAGCAAAGATTGTTTAGTTTTTTTTTTTTTTGTCCAACTTCATCATTTCA - >AT5G27450.1
AACACGATTCTCGTTGGCTTCAGACATTTTCCATCTTCTAGGTTTCTTTCTTTCTCAGCAATTTCCAGGAAAATGGAAGTGAAAGCTAGAGCTCCTGGGAAGATCATACTTGCAGGGGAACACGCTGTTGTTCATGGATCCACCGCTGTAGCTGCCGCCATTGATCTCTACACTTACGTTACTCTCCGCTTTCCTCTTCCATCAGCTGAGAACAATGATAGGCTTACACTTCAGCTCAAGGACATTTCCTTGGAGTTTTCATGGTCCTTAGCCAGAATCAAAGAAGCGATTCCTTATGATTCAAGCACTCTCTGCCGTTCTACGCCGGCTTCATGTTCAGAGGAGACCCTTAAATCAATTGCAGTTTTGGTTGAAGAGCAAAATCTTCCAAAGGAAAAGATGTGGCTCTCCTCTGGGATCTCCACGTTTCTCTGGTTATACACCAGAATTATAGGGTTCAATCCGGCTACAGTAGTCATTAACTCTGAGCTTCCATACGGGTCTGGCCTCGGTTCATCAGCAGCTTTATGTGTAGCTCTCACAGCTGCTCTCCTTGCTTCTTCTATTTCAGAGAAAACCCGTGGTAACGGTTGGTCATCTCTCGATGAAACCAATCTTGAGTTGCTAAATAAATGGGCTTTCGAAGGCGAAAAGATCATCCATGGGAAACCTTCTGGGATAGACAACACCGTCAGTGCATACGGCAACATGATCAAGTTCTGCTCAGGCGAGATAACTCGGTTACAATCCAACATGCCTCTGAGAATGCTAATTACCAACACTAGAGTTGGGCGAAACACAAAAGCTCTGGTCTCTGGTGTGTCACAGAGAGCGGTAAGACATCCTGATGCGATGAAGTCAGTGTTCAACGCCGTGGATTCTATAAGCAAAGAGCTCGCTGCGATCATTCAGTCTAAAGACGAGACCTCAGTTACAGAAAAAGAAGAGAGAATAAAAGAACTCATGGAGATGAACCAAGGTCTGCTCCTGTCAATGGGGGTTAGCCACAGCTCAATCGAGGCTGTGATTCTAACCACGGTCAAGCACAAGCTTGTCTCCAAACTTACAGGAGCTGGTGGCGGCGGCTGCGTCCTCACTCTATTACCAACCGGGACGGTGGTGGACAAAGTGGTGGAGGAGCTCGAGTCCAGCGGTTTTCAGTGTTTCACGGCATTGATTGGTGGTAACGGAGCTCAGATTTGCTATTGATCAGGTCGGAAAAATCATATTTGGCCTCTCACCATTCTTAAACTTGCTGACGTGTACGTCAAGAAGGCTGCAATTAGAAATTCAAAGAGTCGATTTTTTCTTATAAATGATGTGTTGAATGTAAAATTGCTTTATTATTATACCATGTGACAAATAATTGAAAAAAGCAAAGATTGTTTAGTTTTTTTTTTTTTTGTCCAACTTCATCATTTCA - >AT5G27450.2
AACACGATTCTCGTTGGCTTCAGACATTTTCCATCTTCTAGGTTTCTTTCTTTCTCAGCAATTTCCAGGAAAATGGAAGTGAAAGCTAGAGCTCCTGGGAAGATCATACTTGCAGGGGAACACGCTGTTGTTCATGGATCCACCGCTGTAGCTGCCGCCATTGATCTCTACACTTACGTTACTCTCCGCTTTCCTCTTCCATCAGCTGAGAACAATGATAGGCTTACACTTCAGCTCAAGGACATTTCCTTGGAGTTTTCATGGTCCTTAGCCAGAATCAAAGAAGCGATTCCTTATGATTCAAGCACTCTCTGCCGTTCTACGCCGGCTTCATGTTCAGAGGAGACCCTTAAATCAATTGCAGTTTTGGTTGAAGAGCAAAATCTTCCAAAGGAAAAGATGTGGCTCTCCTCTGGGATCTCCACGTTTCTCTGGTTATACACCAGAATTATAGGGTTCAATCCGGCTACAGTAGTCATTAACTCTGAGCTTCCATACGGGTCTGGCCTCGGTTCATCAGCAGCTTTATGTGTAGCTCTCACAGCTGCTCTCCTTGCTTCTTCTATTTCAGAGAAAACCCGTGGTAACGGTTGGTCATCTCTCGATGAAACCAATCTTGAGTTGCTAAATAAATGGGCTTTCGAAGGCGAAAAGATCATCCATGGGAAACCTTCTGGGATAGACAACACCGTCAGTGCATACGGCAACATGATCAAGTTCTGCTCAGGCGAGATAACTCGGTTACAATCCAACATGCCTCTGAGAATGCTAATTACCAACACTAGAGTTGGGCGAAACACAAAAGCTCTGGTCTCTGGTGTGTCACAGAGAGCGGTAAGACATCCTGATGCGATGAAGTCAGTGTTCAACGCCGTGGATTCTATAAGCAAAGAGCTCGCTGCGATCATTCAGTCTAAAGACGAGACCTCAGTTACAGAAAAAGAAGAGAGAATAAAAGAACTCATGGAGATGAACCAAGGTCTGCTCCTGTCAATGGGGGTTAGCCACAGCTCAATCGAGGCTGTGATTCTAACCACGGTCAAGCACAAGCTTGTCTCCAAACTTACAGGAGCTGGTGGCGGCGGCTGCGTCCTCACTCTATTACCAACCGGGACGGTGGTGGACAAAGTGGTGGAGGAGCTCGAGTCCAGCGGTTTTCAGTGTTTCACGGCATTGATTGGTGGTAACGGAGCTCAGATTTGCTATTGATCAGGTCGGAAAAATCATATTTGGCCTCTCACCATTCTTAAACTTGCTGACGTGTACGTCAAGAAGGCTGCAATTAGAAATTCAAAGAGTCGATTTTTTCTTATAAATGATGTGTTGAATGTAAAATTGCTTTATTATTATACCATGTGACAAATAATTGAAAAAAGCAAAGATTGTTTAGTTTTTTTTTTTTTTGTCCAACTTCATCATTTCA
CDS Sequence
Protein Sequence