Information report for AT5G27030
Gene Details
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Functional Descriptions
- SALK_029936C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:no change,osmotic stress:no change,salt stress:no change,ABA:decreased,hypoxia:no change.
- sfr1-4 tpr3-1 — small plant
Functional Keywords
Literature and News
- A high-throughput Arabidopsis reverse genetics system. DOI: 10.1105/tpc.004630 ; PMID: 12468722
- TOPLESS regulates apical embryonic fate in Arabidopsis. DOI: 10.1126/science.1123841 ; PMID: 16763149
- NINJA connects the co-repressor TOPLESS to jasmonate signalling. DOI: 10.1038/nature08854 ; PMID: 20360743
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Organizer-Derived WOX5 Signal Maintains Root Columella Stem Cells through Chromatin-Mediated Repression of CDF4 Expression. DOI: 10.1016/j.devcel.2015.04.024 ; PMID: 26028217
- ABI5-binding proteins (AFPs) alter transcription of ABA-induced genes via a variety of interactions with chromatin modifiers. DOI: 10.1007/s11103-016-0569-1 ; PMID: 27942958
- Opposing functions of the plant TOPLESS gene family during SNC1-mediated autoimmunity. DOI: 10.1371/journal.pgen.1009026 ; PMID: 33621240
- bHLH11 inhibits bHLH IVc proteins by recruiting the TOPLESS/TOPLESS-RELATED corepressors. DOI: 10.1093/plphys/kiab540 ; PMID: 34894263
Gene Resources
- UniProt: A0A5S9Y7H9
- EMBL: CACSHJ010000096
- AlphaFoldDB: A0A5S9Y7H9
- EnsemblPlants: AT5G27030.1
- Gramene: AT5G27030.1
- KEGG: ath:AT5G27030
- ExpressionAtlas: AT5G27030
- InterPro: IPR001680, IPR006594, IPR006595
- PANTHER: PTHR44083, PTHR44083:SF2
- SUPFAM: SSF50998
- PROSITE: PS00678, PS50082, PS50294
- Gene3D: 2.130.10.10
- OrthoDB: A0A5S9Y7H9
Sequences
cDNA Sequence
- >AT5G27030.1
CTACTTATCACCGACGAAGACTCCGCTTATATCTGATAAGTCGGTAGAACGATGTCTCTGTGCAAAGAAGAACGCGTCCAAGAAAGCGAGGTCTAAAGTTTCTCAATCCCCCAATCTTCTCCTCCTTCTTTATATATTCTCTCTCTCTCTCTCCATTTTTCTCTAAAAGCTAGAGCTCTTCAAAACCCTAGAAATCCTCGAAATCAGAGTCTTTACCTGGGCTCGTGTCTTCAGAGCTCGGATTCGTGTTTCTTTCGTCGTCTCTCTTCTTCGTTTCTCGTCAGATTTGAGATTCGTTGAGAATGTCGTCGTTGAGTCGAGAGTTGGTGTTTCTGATACTTCAATTTCTGGAGGAAGAGAAATTTAAGGAATCTGTGCACAGGCTTGAGAAAGAGTCAGGATTCTTCTTCAATACCAAGTATTTTGATGAGAAAGTTCTAGCTGGAGAATGGGATGATGTTGAGACGTATTTGTCAGGTTTTACTAAGGTTGATGATAACAGATACTCTATGAAGATTTTCTTTGAAATTAGGAAGCAGAAGTATCTCGAGGCTCTTGATCGGCAAGAGAAGGCAAAAGCAGTTGAGATACTAGTGCAAGATTTGAGAGTTTTCTCCACTTTCAATGAGGAGCTTTACAAAGAAATCACTCAACTCTTAACTTTGCAAAACTTTAGGGAAAATGAGCAGCTTTCAAAATATGGAGACACTAAAACTGCTCGGGGCATAATGCTAGGCGAACTTAAAAAACTAATTGAAGCGAATCCACTTTTTCGTGATAAATTGATGTTCCCTACTTTGAGATCTTCGAGACTGCGGACTCTGATTAATCAAAGCCTCAATTGGCAGCACCAGTTGTGCAAGAATCCTAGGCCAAACCCAGATATTAAAACTCTATTCACAGACCACACTTGCACACTTCCGAATGGTCCTCTCGCACCTTCAGCAGTCAATCAGCCTGTTACTACTTTGACGAAGCCAGCAGCTTATCCGTCACTTGGACCTCATGTTCCCTTTCCACCTGGTCCTGCTGCTGCTAATGCTGGTGCTTTAGCTAGTTGGATGGCTGCTGCCTCTGGTGCTTCTGCTGTCCAAGCTGCCGTTGTTACACCTGCCTTGATGCCTCAACCTCAGAATCAAATGTCAATCTTGAAGCGACCAAGAACACCACCAGCAACTCCAGGTATAGTAGATTATCAGAATCCTGATCATGAACTAATGAAGCGTCTCCGCCCTGCTCCATCTGTGGAGGAGGTGACATATCCTGCTCCTAGGCAGCAAGCTCCATGGTCGCTGGAAGATTTGCCAACAAAGGCAGCTCTGGCGCTGCATCAAGGGTCCACTGTGACAAGCATGGAGTTCTACCCTATGCAAAACACGTTACTTCTTGTTGGATCTGCGACGGGAGAAATCACATTGTGGGAACTTGCCGCTCGAGAGAGGCTGGTTTCAAGGCCATTCAAGATATGGGATATGTCTAATTGCTCACATCAGTTTCAGGCTTTGATAGCTAAAGAAACACCGATATCTGTCACTCGCGTTGCATGGAGTCCGGATGGAAATTTCATTGGGGTTGCGTTTACAAAACATCTAATTCAGTTGTACGCTTTCTCTGGACCTAATGATCTTCGCCAACATACTGAGATTGATGCCCATGTCGGTGCTGTGAACGACTTGGCTTTCGCCAATCCAAACAGACAACTATGTGTAATTACTTGCGGAGATGATAAATTAATCAAGGTATGGGATGTTTCTGGTCGGAAGCATTTTACTTTTGAAGGCCACGACGCTCCAGTTTATTCCATTTGCCCTCATTACAAAGAGAACATTCAGTTCATATTTTCAACCGCCATAGATGGGAAAATAAAAGCCTGGCTTTATGATAATCTGGGTTCCAGAGTTGACTATGATGCTCCCGGTAAATGGTGTACGAGGATGCTTTACAGTGCTGATGGTACTAGATTGTTCTCTTGTGGAACGAGTAAAGATGGAGATTCTTTCCTAGTTGAGTGGAATGAAAGTGAAGGATCAATTAAAAGGACGTATAAAGAGTTTCAGAAAAAGTTGGCAGGTGTGGTTCAGTTCGATACCTCAAAAAACCATTTTCTGGCTGTTGGTGAAGATGGACAAATCAAATTTTGGGATATGAACAACATCAATGTTCTGACTAGCACTGATGCTGAGGGTGGACTTCCGGCTCTTCCCCATTTGAGATTTAACAAGGACGGCAATCTTCTAGCCGTTACTACGGCAGATAACGGATTTAAGATCCTAGCTAATCCAGCTGGTTTCCGATCTCTTCGAGCGATGGAAACTCCAGCTTCTGAAACGATGAGGACTCCAGTTGATTTCAAAGCTGTTCCTGGTGCTCCTGTTGCGTCTGTCAATTGTAAAGTTGAACGAGGCTCTCCTGTTAGACACTCACAAATGCTGAATGGAGTTGATCCCTCAAAGTCGAGAATCGATGACTCAACAGACAAACCAAAATCTTGGCAATTAGCTGAAATCTTGGACCCTTCCCAGTGTTTCCAAGCTACTTTACCCGATACCGCTGGTTCTTCCACAAAGGTTGTTCAGCTTCTGTATACGAATTCCGGTGCTGGAATCTTGGCACTAGGTTCCAATGGTATCCAGAGACTCTGGAAGTGGGTTCCCAATGAGCAGAACCCTAGTGGAAAGGCAACTGCTACTGTTGTTCCTCAGCATTGGCAACCAAACAGTGGTCTTCTTATGACCAATGATGTGTCTGGTGTAAACCTTGAAAACGCTGCCCCATGCATCGCTCTCTCTAAGAACGACTCATATGTCATGTCTGCTGCTGGAGGAAAAGTCTCGTTGTTCAACATGATGACTTTTAAGGTGATGACAACATTCATGCCGCCTCCACCAGCATCAACGTTTTTGGCGTTCCATCCTCAGGACAATAACGTCATCGCCATTGGAATGGAAGACTCTACGATTCACATCTATAATGTCCGAGTGGATGAGGTCAAATCAAAGCTAAAGGGTCACCAGAAACGCATCACAGGCCTAGCATTTTCTACAGCCCTCAACATCTTGGTTTCATCTGGTGCTGATGCACAGATCTGCTTTTGGAGCATTGACACATGGGAGAAGAGGAAATCCGTTGCAATACAAATGCCAGCAGGAAAAGCCGCCAATGGAGACACGCGGGTTCAGTTTCATGTGGATCAGTTGCGTATTCTGGTAGTCCACGAGACACAACTGGCGGTATTTGATGCTTCCAAGATGGAATGTATCCGACAGTGGATTCCACAAGACTCGCTGTCTGCTCCTATATCTTCAGCGGTGTACGCATGCAACAGCCAGCTGATCTACACCACTTTCCGCGATGGTAACATTGGAGTATTTGACGCGGACAGTCTCAGATTAAGATGTCGTATCTCTCCATCCGCCTACTTGCCTCAAGGGAATCAAGGCTTGTCTCCTCTTGTTGTGGCGGCTCACCCGCAAGACCCAAACCAGTTTGCGGTAGGTTTGAATGACGGGTCAGTGAAGATGATGGAACCGACAGAGGGTGAAGGCAAGTGGGGGATGATTCCACCCTCTGAAGCTATCAATTCACCATCCACCACAAGCAACCAAACTCCAGAACAGTTACAAAGATGAACAAACCAGAATGGCTTCCTCATAATCCATCAATGTAACTAATCTCGATTATTTATAGGCAGTGTCATTAGATCTTCAAATGTAGCCTTAGTTTCAAGATTTCAAGATTTCAAGATATTGAAAATTGGTAAGAAATAAAGTTTGTATAAACTACCTGCAAATCTCTAATGAGTGAATCAACAAGAAACTGAAACT - >AT5G27030.2
CTACTTATCACCGACGAAGACTCCGCTTATATCTGATAAGTCGGTAGAACGATGTCTCTGTGCAAAGAAGAACGCGTCCAAGAAAGCGAGGTCTAAAGTTTCTCAATCCCCCAATCTTCTCCTCCTTCTTTATATATTCTCTCTCTCTCTCTCCATTTTTCTCTAAAAGCTAGAGCTCTTCAAAACCCTAGAAATCCTCGAAATCAGAGTCTTTACCTGGGCTCGTGTCTTCAGAGCTCGGATTCGTGTTTCTTTCGTCGTCTCTCTTCTTCGTTTCTCGTCAGATTTGAGATTCGTTGAGAATGTCGTCGTTGAGTCGAGAGTTGGTGTTTCTGATACTTCAATTTCTGGAGGAAGAGAAATTTAAGGAATCTGTGCACAGGCTTGAGAAAGAGTCAGGATTCTTCTTCAATACCAAGTATTTTGATGAGAAAGTTCTAGCTGGAGAATGGGATGATGTTGAGACGTATTTGTCAGGTTTTACTAAGGTTGATGATAACAGATACTCTATGAAGATTTTCTTTGAAATTAGGAAGCAGAAGTATCTCGAGGCTCTTGATCGGCAAGAGAAGGCAAAAGCAGTTGAGATACTAGTGCAAGATTTGAGAGTTTTCTCCACTTTCAATGAGGAGCTTTACAAAGAAATCACTCAACTCTTAACTTTGCAAAACTTTAGGGAAAATGAGCAGCTTTCAAAATATGGAGACACTAAAACTGCTCGGGGCATAATGCTAGGCGAACTTAAAAAACTAATTGAAGCGAATCCACTTTTTCGTGATAAATTGATGTTCCCTACTTTGAGATCTTCGAGACTGCGGACTCTGATTAATCAAAGCCTCAATTGGCAGCACCAGTTGTGCAAGAATCCTAGGCCAAACCCAGATATTAAAACTCTATTCACAGACCACACTTGCACACTTCCGAATGGTCCTCTCGCACCTTCAGCAGTCAATCAGCCTGTTACTACTTTGACGAAGCCAGCAGCTTATCCGTCACTTGGACCTCATGTTCCCTTTCCACCTGGTCCTGCTGCTGCTAATGCTGGTGCTTTAGCTAGTTGGATGGCTGCTGCCTCTGGTGCTTCTGCTGTCCAAGCTGCCGTTGTTACACCTGCCTTGATGCCTCAACCTCAGAATCAAATGTCAATCTTGAAGCGACCAAGAACACCACCAGCAACTCCAGGTATAGTAGATTATCAGAATCCTGATCATGAACTAATGAAGCGTCTCCGCCCTGCTCCATCTGTGGAGGAGGTGACATATCCTGCTCCTAGGCAGCAAGCTCCATGGTCGCTGGAAGATTTGCCAACAAAGGCAGCTCTGGCGCTGCATCAAGGGTCCACTGTGACAAGCATGGAGTTCTACCCTATGCAAAACACGTTACTTCTTGTTGGATCTGCGACGGGAGAAATCACATTGTGGGAACTTGCCGCTCGAGAGAGGCTGGTTTCAAGGCCATTCAAGATATGGGATATGTCTAATTGCTCACATCAGTTTCAGGCTTTGATAGCTAAAGAAACACCGATATCTGTCACTCGCGTTGCATGGAGTCCGGATGGAAATTTCATTGGGGTTGCGTTTACAAAACATCTAATTCAGTTGTACGCTTTCTCTGGACCTAATGATCTTCGCCAACATACTGAGATTGATGCCCATGTCGGTGCTGTGAACGACTTGGCTTTCGCCAATCCAAACAGACAACTATGTGTAATTACTTGCGGAGATGATAAATTAATCAAGGTATGGGATGTTTCTGGTCGGAAGCATTTTACTTTTGAAGGCCACGACGCTCCAGTTTATTCCATTTGCCCTCATTACAAAGAGAACATTCAGTTCATATTTTCAACCGCCATAGATGGGAAAATAAAAGCCTGGCTTTATGATAATCTGGGTTCCAGAGTTGACTATGATGCTCCCGGTAAATGGTGTACGAGGATGCTTTACAGTGCTGATGGTACTAGATTGTTCTCTTGTGGAACGAGTAAAGATGGAGATTCTTTCCTAGTTGAGTGGAATGAAAGTGAAGGATCAATTAAAAGGACGTATAAAGAGTTTCAGAAAAAGTTGGCAGGTGTGGTTCAGTTCGATACCTCAAAAAACCATTTTCTGGCTGTTGGTGAAGATGGACAAATCAAATTTTGGGATATGAACAACATCAATGTTCTGACTAGCACTGATGCTGAGGGTGGACTTCCGGCTCTTCCCCATTTGAGATTTAACAAGGACGGCAATCTTCTAGCCGTTACTACGGCAGATAACGGATTTAAGATCCTAGCTAATCCAGCTGGTTTCCGATCTCTTCGAGCGATGGAAACTCCAGCTTCTGAAACGATGAGGACTCCAGTTGATTTCAAAGCTGTTCCTGGTGCTCCTGTTGCGTCTGTCAATTGTAAAGTTGAACGAGGCTCTCCTGTTAGACACTCACAAATGCTGAATGGAGTTGATCCCTCAAAGTCGAGAATCGATGACTCAACAGACAAACCAAAATCTTGGCAATTAGCTGAAATCTTGGACCCTTCCCAGTGTTTCCAAGCTACTTTACCCGATACCGCTGGTTCTTCCACAAAGGTTGTTCAGCTTCTGTATACGAATTCCGGTGCTGGAATCTTGGCACTAGGTTCCAATGGTATCCAGAGACTCTGGAAGTGGGTTCCCAATGAGCAGAACCCTAGTGGAAAGGCAACTGCTACTGTTGTTCCTCAGCATTGGCAACCAAACAGTGGTCTTCTTATGACCAATGATGTGTCTGGTGTAAACCTTGAAAACGCTGCCCCATGCATCGCTCTCTCTAAGAACGACTCATATGTCATGTCTGCTGCTGGAGGAAAAGTCTCGTTGTTCAACATGATGACTTTTAAGGTGATGACAACATTCATGCCGCCTCCACCAGCATCAACGTTTTTGGCGTTCCATCCTCAGGACAATAACGTCATCGCCATTGGAATGGAAGACTCTACGATTCACATCTATAATGTCCGAGTGGATGAGGTCAAATCAAAGCTAAAGGGTCACCAGAAACGCATCACAGGCCTAGCATTTTCTACAGCCCTCAACATCTTGGTTTCATCTGGTGCTGATGCACAGATCTGCTTTTGGAGCATTGACACATGGGAGAAGAGGAAATCCGTTGCAATACAAATGCCAGCAGGAAAAGCCGCCAATGGAGACACGCGGGTTCAGTTTCATGTGGATCAGTTGCGTATTCTGGTAGTCCACGAGACACAACTGGCGGTATTTGATGCTTCCAAGATGGAATGTATCCGACAGTGGATTCCACAAGACTCGCTGTCTGCTCCTATATCTTCAGCGGTGTACGCATGCAACAGCCAGCTGATCTACACCACTTTCCGCGATGGTAACATTGGAGTATTTGACGCGGACAGTCTCAGATTAAGATGTCGTATCTCTCCATCCGCCTACTTGCCTCAAGGGAATCAAGGCTTGTCTCCTCTTGTTGTGGCGGCTCACCCGCAAGACCCAAACCAGTTTGCGGTAGGTTTGAATGACGGGTCAGTGAAGATGATGGAACCGACAGAGGGTGAAGGCAAGTGGGGGATGATTCCACCCTCTGAAGCTATCAATTCACCATCCACCACAAGCAACCAAACTCCAGAACAGTTACAAAGATGAACAAACCAGAATGGCTTCCTCATAATCCATCAATGTAACTAATCTCGATTATTTATAGGCAGTGTCATTAGATCTTCAAATGTAGCCTTAGTTTCAAGATTTCAAGATTTCAAGATATTGAAAATTGGTAAGAAATAAAGTTTGTATAAACTACCTGCAAATCTCTAATGAGTGAATCAACAAGAAACTGAAACT
CDS Sequence
Protein Sequence