Gene Details:

• Gene ID: AT5G26742
• Gene Symbol: AtRH3, emb1138, RH3
• Gene Name: embryo defective 1138
• Description: DEAD box RNA helicase (RH3);(source:Araport11)
• TAIR Accession: locus:504955106
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G26742.1     AT5G26742.2     AT5G26742.3

Plant Ontology Annotations:

• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Gene Ontology:

• GO:0009570  — located in — chloroplast stroma
• GO:0000373  — involved in — Group II intron splicing
• GO:0003723  — enables — RNA binding
• GO:0042254  — involved in — ribosome biogenesis
• GO:0003724  — enables — RNA helicase activity
• GO:0009941  — located in — chloroplast envelope
• GO:0008270  — enables — zinc ion binding
• GO:0003729  — enables — mRNA binding
• GO:0009793  — acts upstream of or within — embryo development ending in seed dormancy
• GO:0005634  — located in — nucleus
• GO:0009507  — located in — chloroplast

Germplasm Phenotype:

• CS16011  — embryo defective; developmental arrest of mutant embryos

Function-related keywords:

• guard cell

Literature:

• a high-density colony array study (HDCA).   DOI:  10.1046/j.1365-313x.2003.01847.x ;  PMID:  12969430
• Identification of genes required for embryo development in Arabidopsis.   DOI:  10.1104/pp.104.045179 ;  PMID:  15266054
• Structural and functional insights into the chloroplast ATP-dependent Clp protease in Arabidopsis.   DOI:  10.1105/tpc.106.044594 ;  PMID:  16980539
• Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis.   DOI:  10.1104/pp.110.168120 ;  PMID:  21139083
• Chloroplast RH3 DEAD box RNA helicases in maize and Arabidopsis function in splicing of specific group II introns and affect chloroplast ribosome biogenesis.   DOI:  10.1104/pp.112.197525 ;  PMID:  22576849
• Comparative proteomic analysis provides insight into the biological role of protein phosphatase inhibitor-2 from Arabidopsis.   DOI:  10.1016/j.jprot.2017.06.006 ;  PMID:  28610761
• Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis.   DOI:  10.1111/nph.16071 ;  PMID:  31334862
• Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method.   DOI:  10.3390/biom10040661 ;  PMID:  32344669
• Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.   DOI:  10.1021/pr060525b ;  PMID:  17432890
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis.   DOI:  10.1104/pp.108.124545 ;  PMID:  18633119
• The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts.   DOI:  10.1074/mcp.M500180-MCP200 ;  PMID:  16207701
• Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.   DOI:  10.1021/pr060525b ;  PMID:  17432890
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481

Sequences: