Information report for AT5G26742
Gene Details
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Functional Descriptions
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0009570 — located in — chloroplast stroma
- GO:0000373 — involved in — Group II intron splicing
- GO:0003723 — enables — RNA binding
- GO:0042254 — involved in — ribosome biogenesis
- GO:0003724 — enables — RNA helicase activity
- GO:0009941 — located in — chloroplast envelope
- GO:0008270 — enables — zinc ion binding
- GO:0003729 — enables — mRNA binding
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0005634 — located in — nucleus
- GO:0009507 — located in — chloroplast
- CS16011 — embryo defective; developmental arrest of mutant embryos
Functional Keywords
Literature and News
- a high-density colony array study (HDCA). DOI: 10.1046/j.1365-313x.2003.01847.x ; PMID: 12969430
- Identification of genes required for embryo development in Arabidopsis. DOI: 10.1104/pp.104.045179 ; PMID: 15266054
- Structural and functional insights into the chloroplast ATP-dependent Clp protease in Arabidopsis. DOI: 10.1105/tpc.106.044594 ; PMID: 16980539
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Chloroplast RH3 DEAD box RNA helicases in maize and Arabidopsis function in splicing of specific group II introns and affect chloroplast ribosome biogenesis. DOI: 10.1104/pp.112.197525 ; PMID: 22576849
- Comparative proteomic analysis provides insight into the biological role of protein phosphatase inhibitor-2 from Arabidopsis. DOI: 10.1016/j.jprot.2017.06.006 ; PMID: 28610761
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: F4K180
- EMBL: CP002688
- AlphaFoldDB: F4K180
- EnsemblPlants: AT5G26742.3
- Gramene: AT5G26742.3
- Orthologous matrix: IQYFIPA
- ExpressionAtlas: AT5G26742
- InterPro: IPR001650, IPR001878, IPR011545
- PANTHER: PTHR47959, PTHR47959:SF1
- SUPFAM: SSF52540, SSF57756
- PROSITE: PS50158, PS51192, PS51194
- Gene3D: 3.40.50.300, 4.10.60.10
- OrthoDB: F4K180
- SWISS-MODEL: F4K180
- Conserved Domain Database: cd00268, cd12938, cd18787
Sequences
cDNA Sequence
- >AT5G26742.3
CGTCGTATCCATTCCTCTTCTCTTCTTGTTCCTTCTGCTGTTGCTACTCCTAATTCTGTTCTCAGTGAAGAAGCTTTCAAAAGTCTTGGTCTTTCTGACCATGACGAATATGACCTTGACGGCGACAACAACAACGTTGAAGCTGATGATGGTGAAGAACTCGCTATCTCTAAACTTAGTTTGCCTCAACGTCTTGAAGAGTCTCTTGAGAAACGTGAGAGCTGTGTTGGTACCTGCACTGCAAGGAAGAGATATTATAGCTCGTGCAAAGACAGGAACTGGAAAGACTTTGGCTTTTGGTATTCCTATCATTAAACGTCTCACTGAAGAAGCTGGAGACTACACTGCTTTCAGGAGGTCTGGTCGTCTTCCTAAGTTCCTTGTCCTTGCGCCGACCCGAGAGCTGGCTAAGCAAGTGGAGAAGGAGATTAAGGAGTCTGCACCTTATTTGAGCACTGTTTGTGTGTATGGGGGAGTTTCTTATACCATTCAGCAGAGTGCTTTAACTCGTGGTGTTGATGTTGTTGTTGGAACTCCTGGAAGAATCATTGATTTGATTGAAGGAAGGAGTCTTAAATTGGGAGAAGTTGAGTATTTGGTACTTGATGAAGCTGATCAGATGCTTGCTGTTGGGTTTGAGGAGGCCGTGGAATCGATTCTTGAGAATCTTCCAACTAAGCGACAAAGTATGCTTTTCTCAGCAACTATGCCTACTTGGGTTAAGAAGTTGGCGAGGAAGTACCTTGACAATCCCTTGAATATTGATCTGGTTGGAGACCAAGATGAGAAGCTCGCAGAGGGTATCAAACTTTATGCAATCGCAACCACATCGACATCAAAACGCACTATTCTAAGCGACCTTATTACAGTGTATGCGAAGGGTGGCAAGACCATTGTTTTTACCCAAACTAAAAGAGATGCAGACGAAGTTTCTCTTGCATTGTCAAACAGTATAGCTACCGAAGCACTTCATGGAGATATATCTCAGCATCAAAGAGAGAGAACACTCAATGCTTTCCGTCAAGGGAAATTCACCGTATTAGTTGCCACTGATGTTGCATCTCGTGGACTTGACATCCCGAACGTAGATCTAGTTATCCACTATGAACTTCCTAATGACCCAGAAACTTTTGTGCACCGTTCTGGTCGTACTGGGCGTGCAGGGAAAGAAGGCTCTGCCATTCTCATGCACACCAGCAGCCAAAAGAGAACAGTGAGGTCTCTGGAGCGTGACGTAGGCTGCCATTTTGAATTCATTAGCCCACCAACTGTTGGAGACTTGTTGGAATCGTCAGCAGACCAAGTGGTGGCCACTCTAAATGGTGTTCACCCTGACTCCATAAAGTTTTTCTCAGCAACTGCTCAAAAACTATATGAGGAGAAAGGAACAGATGCTTTAGCTGCAGCTCTAGCTCACCTGAGTGGTTTCTCTCAGCCGCCTTCATCAAGATCTCTCCTCAGCCATGAGAAGGGATGGGTGACTTTGCAATTGATCCGAGATCCAACGAACGCTAGAGGCTTTCTGTCTGCGAGGTCTGTTACTGGTTTTCTTTCCGATCTTTACCGTACAGCTGCAGATGAAGTTGGAAAAATCTTCTTGATCGCCGATGACAGGATCCAAGGAGCTGTATTTGATCTACCAGAGGAGATCGCGAAAGAGCTCCTAGAGAAAGATGTCCCCGAAGGCAACAGTTTATCCATGATAACAAAGTTACCTCCACTTCAAGATGACGGACCATCTAGTGATAACTACGGACGGTTCTCTAGCAGAGACAGGATGCCTAGAGGAGGAGGAGGTTCTAGAGGGTCAAGAGGCGGTAGAGGAGGATCATCACGAGGCCGTGATAGTTGGGGAGGTGATGATGACAGAGGTAGTAGAAGGAGCAGTGGTGGAGGAAGCAGCTGGTCCCGAGGTGGTAGTAGTTCCAGAGGAAGTTCTGATGATTGGTTGATCGGTGGCAGAAGTTCATCAAGCAGCAGAGCTCCTTCGCGGGAGAGAAGTTTTGGAGGTTCATGCTTCATTTGTGGGAAATCTGGACACAGGGCAACAGATTGTCCTGATAAGAGAGGATTTTAGAGTTATCGTAGCAAATGGTTTCTGCTCTTGGGAGAAAGATCCTTGTCCTTTTTGGTGTTCTTAATGCGAATCTTTTCGTGCTTGCTTCAACGGTTTGTTTCAGACGGTAGAGAAGCAATCAGGGAGGAGGATACATGCTTCGGACAAGGTAGAGCAGAAATAAATAAGAGAGAGGCAATAGCAAAAGTAAAGGAGAAGGTTTTCCTCAAATTGGCATTTTCAGAGTTTGCGTGAGAAACAAGGGAAAGCTGATGGATCTTTTTATGTTAGGGTTATTATAATAGTCTTAATGATCAGTTTCCATGTTTCTAAGGTTTTGTTTGATTTAAGTGGTTATTAGTCAGTCTACTTACACTACTTTTATTTTCATTTTTGTACGTTTTCTATTGTTATATGTGAATTCGGATCACATGTGTTTGGACAGAAAAAATAAATAAATATATTTTTA - >AT5G26742.2
CGTCGTATCCATTCCTCTTCTCTTCTTGTTCCTTCTGCTGTTGCTACTCCTAATTCTGTTCTCAGTGAAGAAGCTTTCAAAAGTCTTGGTCTTTCTGACCATGACGAATATGACCTTGACGGCGACAACAACAACGTTGAAGCTGATGATGGTGAAGAACTCGCTATCTCTAAACTTAGTTTGCCTCAACGTCTTGAAGAGTCTCTTGAGAAACGTGAGAGCTGTGTTGGTACCTGCACTGCAAGGAAGAGATATTATAGCTCGTGCAAAGACAGGAACTGGAAAGACTTTGGCTTTTGGTATTCCTATCATTAAACGTCTCACTGAAGAAGCTGGAGACTACACTGCTTTCAGGAGGTCTGGTCGTCTTCCTAAGTTCCTTGTCCTTGCGCCGACCCGAGAGCTGGCTAAGCAAGTGGAGAAGGAGATTAAGGAGTCTGCACCTTATTTGAGCACTGTTTGTGTGTATGGGGGAGTTTCTTATACCATTCAGCAGAGTGCTTTAACTCGTGGTGTTGATGTTGTTGTTGGAACTCCTGGAAGAATCATTGATTTGATTGAAGGAAGGAGTCTTAAATTGGGAGAAGTTGAGTATTTGGTACTTGATGAAGCTGATCAGATGCTTGCTGTTGGGTTTGAGGAGGCCGTGGAATCGATTCTTGAGAATCTTCCAACTAAGCGACAAAGTATGCTTTTCTCAGCAACTATGCCTACTTGGGTTAAGAAGTTGGCGAGGAAGTACCTTGACAATCCCTTGAATATTGATCTGGTTGGAGACCAAGATGAGAAGCTCGCAGAGGGTATCAAACTTTATGCAATCGCAACCACATCGACATCAAAACGCACTATTCTAAGCGACCTTATTACAGTGTATGCGAAGGGTGGCAAGACCATTGTTTTTACCCAAACTAAAAGAGATGCAGACGAAGTTTCTCTTGCATTGTCAAACAGTATAGCTACCGAAGCACTTCATGGAGATATATCTCAGCATCAAAGAGAGAGAACACTCAATGCTTTCCGTCAAGGGAAATTCACCGTATTAGTTGCCACTGATGTTGCATCTCGTGGACTTGACATCCCGAACGTAGATCTAGTTATCCACTATGAACTTCCTAATGACCCAGAAACTTTTGTGCACCGTTCTGGTCGTACTGGGCGTGCAGGGAAAGAAGGCTCTGCCATTCTCATGCACACCAGCAGCCAAAAGAGAACAGTGAGGTCTCTGGAGCGTGACGTAGGCTGCCATTTTGAATTCATTAGCCCACCAACTGTTGGAGACTTGTTGGAATCGTCAGCAGACCAAGTGGTGGCCACTCTAAATGGTGTTCACCCTGACTCCATAAAGTTTTTCTCAGCAACTGCTCAAAAACTATATGAGGAGAAAGGAACAGATGCTTTAGCTGCAGCTCTAGCTCACCTGAGTGGTTTCTCTCAGCCGCCTTCATCAAGATCTCTCCTCAGCCATGAGAAGGGATGGGTGACTTTGCAATTGATCCGAGATCCAACGAACGCTAGAGGCTTTCTGTCTGCGAGGTCTGTTACTGGTTTTCTTTCCGATCTTTACCGTACAGCTGCAGATGAAGTTGGAAAAATCTTCTTGATCGCCGATGACAGGATCCAAGGAGCTGTATTTGATCTACCAGAGGAGATCGCGAAAGAGCTCCTAGAGAAAGATGTCCCCGAAGGCAACAGTTTATCCATGATAACAAAGTTACCTCCACTTCAAGATGACGGACCATCTAGTGATAACTACGGACGGTTCTCTAGCAGAGACAGGATGCCTAGAGGAGGAGGAGGTTCTAGAGGGTCAAGAGGCGGTAGAGGAGGATCATCACGAGGCCGTGATAGTTGGGGAGGTGATGATGACAGAGGTAGTAGAAGGAGCAGTGGTGGAGGAAGCAGCTGGTCCCGAGGTGGTAGTAGTTCCAGAGGAAGTTCTGATGATTGGTTGATCGGTGGCAGAAGTTCATCAAGCAGCAGAGCTCCTTCGCGGGAGAGAAGTTTTGGAGGTTCATGCTTCATTTGTGGGAAATCTGGACACAGGGCAACAGATTGTCCTGATAAGAGAGGATTTTAGAGTTATCGTAGCAAATGGTTTCTGCTCTTGGGAGAAAGATCCTTGTCCTTTTTGGTGTTCTTAATGCGAATCTTTTCGTGCTTGCTTCAACGGTTTGTTTCAGACGGTAGAGAAGCAATCAGGGAGGAGGATACATGCTTCGGACAAGGTAGAGCAGAAATAAATAAGAGAGAGGCAATAGCAAAAGTAAAGGAGAAGGTTTTCCTCAAATTGGCATTTTCAGAGTTTGCGTGAGAAACAAGGGAAAGCTGATGGATCTTTTTATGTTAGGGTTATTATAATAGTCTTAATGATCAGTTTCCATGTTTCTAAGGTTTTGTTTGATTTAAGTGGTTATTAGTCAGTCTACTTACACTACTTTTATTTTCATTTTTGTACGTTTTCTATTGTTATATGTGAATTCGGATCACATGTGTTTGGACAGAAAAAATAAATAAATATATTTTTA - >AT5G26742.1
CGTCGTATCCATTCCTCTTCTCTTCTTGTTCCTTCTGCTGTTGCTACTCCTAATTCTGTTCTCAGTGAAGAAGCTTTCAAAAGTCTTGGTCTTTCTGACCATGACGAATATGACCTTGACGGCGACAACAACAACGTTGAAGCTGATGATGGTGAAGAACTCGCTATCTCTAAACTTAGTTTGCCTCAACGTCTTGAAGAGTCTCTTGAGAAACGTGAGAGCTGTGTTGGTACCTGCACTGCAAGGAAGAGATATTATAGCTCGTGCAAAGACAGGAACTGGAAAGACTTTGGCTTTTGGTATTCCTATCATTAAACGTCTCACTGAAGAAGCTGGAGACTACACTGCTTTCAGGAGGTCTGGTCGTCTTCCTAAGTTCCTTGTCCTTGCGCCGACCCGAGAGCTGGCTAAGCAAGTGGAGAAGGAGATTAAGGAGTCTGCACCTTATTTGAGCACTGTTTGTGTGTATGGGGGAGTTTCTTATACCATTCAGCAGAGTGCTTTAACTCGTGGTGTTGATGTTGTTGTTGGAACTCCTGGAAGAATCATTGATTTGATTGAAGGAAGGAGTCTTAAATTGGGAGAAGTTGAGTATTTGGTACTTGATGAAGCTGATCAGATGCTTGCTGTTGGGTTTGAGGAGGCCGTGGAATCGATTCTTGAGAATCTTCCAACTAAGCGACAAAGTATGCTTTTCTCAGCAACTATGCCTACTTGGGTTAAGAAGTTGGCGAGGAAGTACCTTGACAATCCCTTGAATATTGATCTGGTTGGAGACCAAGATGAGAAGCTCGCAGAGGGTATCAAACTTTATGCAATCGCAACCACATCGACATCAAAACGCACTATTCTAAGCGACCTTATTACAGTGTATGCGAAGGGTGGCAAGACCATTGTTTTTACCCAAACTAAAAGAGATGCAGACGAAGTTTCTCTTGCATTGTCAAACAGTATAGCTACCGAAGCACTTCATGGAGATATATCTCAGCATCAAAGAGAGAGAACACTCAATGCTTTCCGTCAAGGGAAATTCACCGTATTAGTTGCCACTGATGTTGCATCTCGTGGACTTGACATCCCGAACGTAGATCTAGTTATCCACTATGAACTTCCTAATGACCCAGAAACTTTTGTGCACCGTTCTGGTCGTACTGGGCGTGCAGGGAAAGAAGGCTCTGCCATTCTCATGCACACCAGCAGCCAAAAGAGAACAGTGAGGTCTCTGGAGCGTGACGTAGGCTGCCATTTTGAATTCATTAGCCCACCAACTGTTGGAGACTTGTTGGAATCGTCAGCAGACCAAGTGGTGGCCACTCTAAATGGTGTTCACCCTGACTCCATAAAGTTTTTCTCAGCAACTGCTCAAAAACTATATGAGGAGAAAGGAACAGATGCTTTAGCTGCAGCTCTAGCTCACCTGAGTGGTTTCTCTCAGCCGCCTTCATCAAGATCTCTCCTCAGCCATGAGAAGGGATGGGTGACTTTGCAATTGATCCGAGATCCAACGAACGCTAGAGGCTTTCTGTCTGCGAGGTCTGTTACTGGTTTTCTTTCCGATCTTTACCGTACAGCTGCAGATGAAGTTGGAAAAATCTTCTTGATCGCCGATGACAGGATCCAAGGAGCTGTATTTGATCTACCAGAGGAGATCGCGAAAGAGCTCCTAGAGAAAGATGTCCCCGAAGGCAACAGTTTATCCATGATAACAAAGTTACCTCCACTTCAAGATGACGGACCATCTAGTGATAACTACGGACGGTTCTCTAGCAGAGACAGGATGCCTAGAGGAGGAGGAGGTTCTAGAGGGTCAAGAGGCGGTAGAGGAGGATCATCACGAGGCCGTGATAGTTGGGGAGGTGATGATGACAGAGGTAGTAGAAGGAGCAGTGGTGGAGGAAGCAGCTGGTCCCGAGGTGGTAGTAGTTCCAGAGGAAGTTCTGATGATTGGTTGATCGGTGGCAGAAGTTCATCAAGCAGCAGAGCTCCTTCGCGGGAGAGAAGTTTTGGAGGTTCATGCTTCATTTGTGGGAAATCTGGACACAGGGCAACAGATTGTCCTGATAAGAGAGGATTTTAGAGTTATCGTAGCAAATGGTTTCTGCTCTTGGGAGAAAGATCCTTGTCCTTTTTGGTGTTCTTAATGCGAATCTTTTCGTGCTTGCTTCAACGGTTTGTTTCAGACGGTAGAGAAGCAATCAGGGAGGAGGATACATGCTTCGGACAAGGTAGAGCAGAAATAAATAAGAGAGAGGCAATAGCAAAAGTAAAGGAGAAGGTTTTCCTCAAATTGGCATTTTCAGAGTTTGCGTGAGAAACAAGGGAAAGCTGATGGATCTTTTTATGTTAGGGTTATTATAATAGTCTTAATGATCAGTTTCCATGTTTCTAAGGTTTTGTTTGATTTAAGTGGTTATTAGTCAGTCTACTTACACTACTTTTATTTTCATTTTTGTACGTTTTCTATTGTTATATGTGAATTCGGATCACATGTGTTTGGACAGAAAAAATAAATAAATATATTTTTA
CDS Sequence
Protein Sequence