Gene Details:
- Gene ID: AT5G26210
- Gene Symbol: AL4
- Gene Name: alfin-like 4
- Description: alfin-like 4;(source:Araport11)
- TAIR Accession: locus:2179709
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Gene Ontology:
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0035064 — enables — methylated histone binding
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0005634 — is active in — nucleus
- GO:0003712 — enables — transcription coregulator activity
- GO:0005634 — located in — nucleus
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0010605 — acts upstream of or within — negative regulation of macromolecule metabolic process
- GO:0010468 — acts upstream of or within — regulation of gene expression
- GO:0009892 — acts upstream of or within — negative regulation of metabolic process
Function-related keywords:
Literature:
- a high-density colony array study (HDCA). DOI: 10.1046/j.1365-313x.2003.01847.x ; PMID: 12969430
- Intergenic and genic sequence lengths have opposite relationships with respect to gene expression. DOI: 10.1371/journal.pone.0003670 ; PMID: 18989364
- Arabidopsis ING and Alfin1-like protein families localize to the nucleus and bind to H3K4me3/2 via plant homeodomain fingers. DOI: 10.1111/j.1365-313X.2009.03795.x ; PMID: 19154204
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Family-Wide Characterization of Histone Binding Abilities of PHD Domains of AL Proteins in Arabidopsis thaliana. DOI: 10.1007/s10930-018-9796-4 ; PMID: 30259302
- Arabidopsis ING and Alfin1-like protein families localize to the nucleus and bind to H3K4me3/2 via plant homeodomain fingers. DOI: 10.1111/j.1365-313X.2009.03795.x ; PMID: 19154204
Sequences:
cDNA Sequence
- >AT5G26210.1
CAACAACAGAAATCAGGAGATACGCGTCAAGATCTAAGAGGATGAAAGATAAAACTTATCGTGCTCTCCTCCTCATCAGATTCATTTTGCGGACTCCTCCTCATCTTATTAAATCCGCTTAATTGTTTTTGGGTCCGCCCTTTTTCTCTTTCACATCTTTCTTTCTCTCGCAAACCCAAATTCTCTCAGCGCCGGTCAAATACTTGTCTCTCTCTCTCTCTCTCTTTCACTCTTGTCTTGTCTCCTTCGAAGCTGTTTGTTCTGTAAGAAAGATGGAAGCAGGTGGCGCGTACAATCCACGCACTGTTGAAGAGGTGTTTAGGGATTTTAAGGGTCGTAGAGCTGGCATGATTAAGGCTTTAACCACTGATGTTCAGGAGTTTTTCCGACTTTGTGATCCCGAAAAGGAGAACCTTTGCCTTTACGGACATCCAAATGAGCACTGGGAAGTGAATTTGCCAGCTGAAGAGGTTCCTCCTGAGCTCCCAGAGCCTGTCTTGGGTATCAATTTTGCCAGAGACGGGATGGCGGAAAAGGATTGGTTGTCCCTTGTTGCTGTCCACAGTGATGCTTGGCTTCTTGCTGTTGCTTTCTTTTTTGGAGCCAGGTTTGGATTTGACAAAGCTGATAGGAAGAGGCTTTTCAATATGGTGAATGACCTCCCAACAATCTTTGAGGTTGTAGCTGGCACTGCTAAGAAACAAGGAAAAGATAAGTCCTCTGTTTCCAACAACAGCAGCAACAGATCCAAATCAAGCTCCAAGCGAGGATCTGAATCCCGTGCCAAGTTCTCAAAGCCGGAGCCGAAAGATGATGAGGAGGAGGAAGAGGAAGGTGTGGAAGAGGAGGATGAGGATGAGCAAGGTGAAACACAGTGTGGAGCATGTGGTGAGAGCTATGCAGCTGATGAGTTCTGGATTTGCTGTGACCTCTGTGAGATGTGGTTTCATGGAAAGTGTGTTAAGATAACACCAGCAAGAGCTGAGCACATCAAGCAATACAAGTGCCCTTCTTGCAGCAACAAAAGGGCTCGTTCCTAAATTTGTTGACCGCTCGCTTCTGTGTATCTACCTTTGCATATGATGATGAACAGCTTAACTGTTTGGTTTAGATCAGATTTGTCATATGGATTTGGTAATTTAGGAAGACATTTTAGTTTTTTCATTGTTACATTTTGGCGATTGAAGGGATAACTCTTTGTTTAGGGGTAATGATCTTTTGCTCTGTTTTATGTTTGTTTATTAACATTCTTCAAACTCAATCAAAAGTATTTTGGTTAGTCTTAACA
CDS Sequence
Protein Sequence