Gene Details:
- Gene ID: AT5G26040
- Gene Symbol: HDA2
- Gene Name: histone deacetylase 2
- Description: histone deacetylase 2;(source:Araport11)
- TAIR Accession: locus:2180657
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0004407 — enables — histone deacetylase activity
- GO:0008270 — enables — zinc ion binding
- GO:0000118 — part of — histone deacetylase complex
- GO:0016575 — acts upstream of or within — histone deacetylation
- GO:0016575 — involved in — histone deacetylation
- GO:0005634 — located in — nucleus
Function-related keywords:
Literature:
- Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes. DOI: 10.1093/nar/gkf660 ; PMID: 12466527
- Effectiveness of RNA interference in transgenic plants. DOI: 10.1016/j.febslet.2004.04.043 ; PMID: 15147899
- The Arabidopsis cold-responsive transcriptome and its regulation by ICE1. DOI: 10.1105/tpc.105.035568 ; PMID: 16214899
- A transcriptome-based characterization of habituation in plant tissue culture. DOI: 10.1104/pp.105.076059 ; PMID: 16489130
- HD2A and HD2C co-regulate drought stress response by modulating stomatal closure and root growth in Arabidopsis. DOI: 10.3389/fpls.2022.1062722 ; PMID: 36507458
Sequences:
cDNA Sequence
- >AT5G26040.1
AACAAAAAAAATATCTCACCGCTTCAGACCAAAAACTAATGACACATACCCGAGTCATCTCGACCTGGACCGAGTTAACTCGCGACTTAGCTATTTACTTGCTCTTCACGTTTTTCGCAATCAAAGTCTTCAAATTTCTCTTCTCCTGTAATCGAACCTCTGAAATATCATCGTTTTCGATGGCGACTCATCCCGAAGCTCTCCGACGAGAGCGAATTCTCAACAGTAAACTCTACTTCGACGTTCCTCTTTCAAAGGTTTCGATTATCTATTCATCGTCTTATGATATCTCGTTCATGGGTATTGAGAAATTGCACCCATTTGATTCTTCCAAGTGGGGTAGAGTTTGCAAGTTCCTTGTTTCAGATGGGTTTCTGGAGGAGAAAGCAATTGTTGAGCCTCTTGAAGCTTCAAAGATTGATCTTTTAGTGGTACATTCTGAGAACTACTTAAACAGCTTGAAAAGCAGTGCCACTGTCGCTAGGATCACCGAGGTTGCACCAGTTGCGTTTTTTCCGAATTTTCTTGTGCAGCAGAAAGTTCTTTACCCATTCCGAAAGCAGGTTGGTGGGACGATTCTGGCAGCTAAACTTGCAACAGAACGTGGATGGGCGATAAACATTGGAGGAGGTTTTCATCATTGTACTGCTGAAAGAGGAGATCTTGATGCTCATCAAGGGAATGGCCATGAAACAGATCTCGGCGATGACAACCGTGTTTACATTTTGGATATGTACAATCCCGAGATATACCCTTTCGATTATAGAGCTAGGAGATTTATCGATCAGAAAGTTGAGGTCATGAGCGGGACGACCACCGATGAGTATTTGAGGAAACTAGATGAAGCCCTTGAGGTTGCTTCGCGAAACTTCCAACCGGAGTTGGTAATTTACAATGCTGGCACAGACATATTAGATGGTGACCCTCTGGGACTTCTAAAGATAAGCCCCGATGGCATAACAAGTAGAGACGAGAAAGTCTTCAGATTTGCAAGGGAGAAAAATATTCCTCTTGTGATGCTAACCTCAGGCGGGTACATGAAGTCAAGCGCTAGAGTTATTGCGGATTCCATTGAGAATCTCTCACGGCAAGGGTTGATCCAGACACGACCGGAATAAGTCATATAGCCAAAGACAGAGTTTCTTTGTTTTGTGTTTGTGTATATTTGTATAGAGAGAGACCCTTATGATGTGTTTGTCACCTTTTGTATATGTGTACCTTTCCCTTGTTTAATTTACTTGTAAGTTCAGTGTTGAAACGTATTCAAAAGCTTTATATTCTG - >AT5G26040.2
AACAAAAAAAATATCTCACCGCTTCAGACCAAAAACTAATGACACATACCCGAGTCATCTCGACCTGGACCGAGTTAACTCGCGACTTAGCTATTTACTTGCTCTTCACGTTTTTCGCAATCAAAGTCTTCAAATTTCTCTTCTCCTGTAATCGAACCTCTGAAATATCATCGTTTTCGATGGCGACTCATCCCGAAGCTCTCCGACGAGAGCGAATTCTCAACAGTAAACTCTACTTCGACGTTCCTCTTTCAAAGGTTTCGATTATCTATTCATCGTCTTATGATATCTCGTTCATGGGTATTGAGAAATTGCACCCATTTGATTCTTCCAAGTGGGGTAGAGTTTGCAAGTTCCTTGTTTCAGATGGGTTTCTGGAGGAGAAAGCAATTGTTGAGCCTCTTGAAGCTTCAAAGATTGATCTTTTAGTGGTACATTCTGAGAACTACTTAAACAGCTTGAAAAGCAGTGCCACTGTCGCTAGGATCACCGAGGTTGCACCAGTTGCGTTTTTTCCGAATTTTCTTGTGCAGCAGAAAGTTCTTTACCCATTCCGAAAGCAGGTTGGTGGGACGATTCTGGCAGCTAAACTTGCAACAGAACGTGGATGGGCGATAAACATTGGAGGAGGTTTTCATCATTGTACTGCTGAAAGAGGAGATCTTGATGCTCATCAAGGGAATGGCCATGAAACAGATCTCGGCGATGACAACCGTGTTTACATTTTGGATATGTACAATCCCGAGATATACCCTTTCGATTATAGAGCTAGGAGATTTATCGATCAGAAAGTTGAGGTCATGAGCGGGACGACCACCGATGAGTATTTGAGGAAACTAGATGAAGCCCTTGAGGTTGCTTCGCGAAACTTCCAACCGGAGTTGGTAATTTACAATGCTGGCACAGACATATTAGATGGTGACCCTCTGGGACTTCTAAAGATAAGCCCCGATGGCATAACAAGTAGAGACGAGAAAGTCTTCAGATTTGCAAGGGAGAAAAATATTCCTCTTGTGATGCTAACCTCAGGCGGGTACATGAAGTCAAGCGCTAGAGTTATTGCGGATTCCATTGAGAATCTCTCACGGCAAGGGTTGATCCAGACACGACCGGAATAAGTCATATAGCCAAAGACAGAGTTTCTTTGTTTTGTGTTTGTGTATATTTGTATAGAGAGAGACCCTTATGATGTGTTTGTCACCTTTTGTATATGTGTACCTTTCCCTTGTTTAATTTACTTGTAAGTTCAGTGTTGAAACGTATTCAAAAGCTTTATATTCTG
CDS Sequence
Protein Sequence