Information report for AT5G26030
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0006783 — involved in — heme biosynthetic process
- GO:0004325 — enables — ferrochelatase activity
- GO:0006783 — acts upstream of or within — heme biosynthetic process
- GO:0006979 — acts upstream of or within — response to oxidative stress
- GO:0005739 — located in — mitochondrion
- GO:0033014 — acts upstream of or within — tetrapyrrole biosynthetic process
- GO:0009507 — located in — chloroplast
- GO:0009536 — located in — plastid
- GO:0005739 — is active in — mitochondrion
- atfc1 — no visible phenotype. decreased heme contents in roots
Functional Keywords
Literature and News
- Two different genes encode ferrochelatase in Arabidopsis: mapping, expression and subcellular targeting of the precursor proteins. DOI: 10.1046/j.1365-313x.1998.00235.x ; PMID: 9753778
- Arabidopsis thaliana ferrochelatase-I and -II are not imported into Arabidopsis mitochondria. DOI: 10.1016/s0014-5793(01)02925-8 ; PMID: 11602264
- Expression analysis of the two ferrochelatase genes in Arabidopsis in different tissues and under stress conditions reveals their different roles in haem biosynthesis. DOI: 10.1023/a:1019959224271 ; PMID: 12374307
- Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism. DOI: 10.1023/a:1023005504702 ; PMID: 12777052
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Gene expression profiling of the tetrapyrrole metabolic pathway in Arabidopsis with a mini-array system. DOI: 10.1104/pp.104.042408 ; PMID: 15326282
- Transcript profiling in Arabidopsis reveals complex responses to global inhibition of DNA methylation and histone deacetylation. DOI: 10.1074/jbc.M409053200 ; PMID: 15516340
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Synteny conservation between the Prunus genome and both the present and ancestral Arabidopsis genomes. DOI: 10.1186/1471-2164-7-81 ; PMID: 16615871
- Induction of isoforms of tetrapyrrole biosynthetic enzymes, AtHEMA2 and AtFC1, under stress conditions and their physiological functions in Arabidopsis. DOI: 10.1104/pp.107.100065 ; PMID: 17416636
- Integration of Arabidopsis thaliana stress-related transcript profiles, promoter structures, and cell-specific expression. DOI: 10.1186/gb-2007-8-4-r49 ; PMID: 17408486
- UV-B signaling pathways with different fluence-rate response profiles are distinguished in mature Arabidopsis leaf tissue by requirement for UVR8, HY5, and HYH. DOI: 10.1104/pp.107.108456 ; PMID: 18055587
- PIF1 directly and indirectly regulates chlorophyll biosynthesis to optimize the greening process in Arabidopsis. DOI: 10.1073/pnas.0803611105 ; PMID: 18591656
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Light signalling pathways regulating the Mg-chelatase branchpoint of chlorophyll synthesis during de-etiolation in Arabidopsis thaliana. DOI: 10.1039/b802596g ; PMID: 18846290
- Heme synthesis by plastid ferrochelatase I regulates nuclear gene expression in plants. DOI: 10.1016/j.cub.2011.04.004 ; PMID: 21565502
- Functional characterization of the two ferrochelatases in Arabidopsis thaliana. DOI: 10.1111/pce.12248 ; PMID: 24329537
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Ubiquitin facilitates a quality-control pathway that removes damaged chloroplasts. DOI: 10.1126/science.aac7444 ; PMID: 26494759
- Allocation of Heme Is Differentially Regulated by Ferrochelatase Isoforms in Arabidopsis Cells. DOI: 10.3389/fpls.2016.01326 ; PMID: 27630653
- Transcriptional Regulation of Tetrapyrrole Biosynthesis in Arabidopsis thaliana. DOI: 10.3389/fpls.2016.01811 ; PMID: 27990150
- Salt stress-induced FERROCHELATASE 1 improves resistance to salt stress by limiting sodium accumulation in Arabidopsis thaliana. DOI: 10.1038/s41598-017-13593-9 ; PMID: 29116128
- Complementation studies of the Arabidopsis fc1 mutant substantiate essential functions of ferrochelatase 1 during embryogenesis and salt stress. DOI: 10.1111/pce.13448 ; PMID: 30242849
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- The retrograde signaling protein GUN1 regulates tetrapyrrole biosynthesis. DOI: 10.1073/pnas.1911251116 ; PMID: 31732672
- Arabidopsis thaliana ferrochelatase-I and -II are not imported into Arabidopsis mitochondria. DOI: 10.1016/s0014-5793(01)02925-8 ; PMID: 11602264
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Induction of isoforms of tetrapyrrole biosynthetic enzymes, AtHEMA2 and AtFC1, under stress conditions and their physiological functions in Arabidopsis. DOI: 10.1104/pp.107.100065 ; PMID: 17416636
Gene Resources
- UniProt: A0A178UJK8
- EMBL: LR881470, LUHQ01000005
- AlphaFoldDB: A0A178UJK8
- EnsemblPlants: AT5G26030.1, AT5G26030.2
- Gramene: AT5G26030.1, AT5G26030.2
- KEGG: ath:AT5G26030
- Orthologous matrix: DPYHCEC
- ExpressionAtlas: AT5G26030
- InterPro: IPR001015, IPR019772, IPR033644
- PANTHER: PTHR11108, PTHR11108:SF4
- SUPFAM: SSF53800
- PROSITE: PS00534
- Gene3D: 3.40.50.1400
- SWISS-MODEL: A0A178UJK8
- Conserved Domain Database: cd00419, cd03411
Sequences
cDNA Sequence
- >AT5G26030.2
ACACGCCTAACCTGCTTCAATGGAAAAGTCATACATTTACCTAACCAGACCTTCTTCGCATCTTCGTCTTCTTCCTTCGTGATCTCTCAAATTCTCTCCCTTTTAAAGTCCTAAATCAAAACCCTAAACCCATAAATCCAATCCCTCCATTCGAATTCTTCATTCTCTCTCTCTCTCTCTCTCACAATTACTGATCGGTTCTGAAATTTGTAGCTATGCAGGCAACGGCTTTATCATCTGGGTTCAATCCTCTAACGAAACGTAAAGATCACAGATTTCCCAGGTCATGCTCTCAGAGAAATTCTCTGTCTTTGATTCAATGCGATATAAAAGAGAGATCTTTCGGAGAGTCTATGACGATCACGAATCGTGGATTGAGTTTTAAGACGAATGTGTTTGAGCAAGCTCGTTCTGTGACTGGAGACTGTTCTTATGATGAAACTTCAGCTAAAGCACGTTCTCATGTTGTTGCAGAAGATAAGATTGGTGTCTTGCTTTTGAATTTAGGTGGTCCTGAAACTCTTAACGATGTTCAACCTTTCTTGTATAATCTCTTTGCTGATCCGGATATTATAAGGCTTCCTAGACCATTTCAGTTTCTTCAAGGGACTATAGCTAAGTTTATATCTGTTGTTCGTGCTCCGAAATCTAAAGAAGGGTATGCTGCTATTGGTGGTGGCTCTCCTTTGCGTAAAATAACTGATGAGCAAGCGGATGCTATTAAGATGTCTTTGCAAGCGAAGAACATTGCTGCTAATGTCTATGTTGGTATGCGGTATTGGTATCCGTTCACTGAGGAGGCTGTTCAGCAGATAAAGAAGGACAAAATTACTAGACTTGTTGTACTGCCATTGTATCCTCAGTATTCTATCTCTACAACGGGTTCAAGCATACGCGTTCTCCAAGATTTATTCAGGAAAGATCCGTACCTAGCTGGAGTGCCGGTAGCTATTATAAAGTCCTGGTACCAAAGGCGAGGCTATGTCAATTCTATGGCTGACCTCATTGAGAAGGAGCTTCAAACTTTCTCTGATCCTAAGGAGGTTATGATATTCTTCAGTGCCCATGGTGTTCCGGTCAGCTACGTAGAGAATGCTGGAGATCCGTACCAGAAGCAGATGGAAGAGTGTATTGACTTGATAATGGAAGAGCTAAAAGCCAGAGGGGTTCTTAACGACCATAAATTGGCATACCAGAGTCGTGTTGGCCCTGTTCAATGGCTGAAGCCATACACCGATGAGGTTCTTGTCGACCTTGGTAAGAGTGGTGTTAAGAGTCTACTAGCCGTTCCAGTCAGTTTCGTGAGTGAGCACATTGAGACACTTGAGGAGATAGACATGGAGTATAGGGAATTAGCTCTTGAGTCAGGGGTAGAGAACTGGGGACGGGTACCCGCGCTAGGTCTCACACCATCCTTCATCACCGACTTAGCTGATGCAGTGATAGAATCACTTCCTTCAGCAGAAGCAATGTCAAACCCAAATGCAGTGGTTGACTCAGAAGATAGCGAGTCGTCAGATGCTTTCAGTTACATTGTCAAGATGTTCTTCGGTTCGATTCTGGCTTTCGTCCTACTTCTCTCCCCAAAGATGTTCCATGCGTTCCGGAACCTATAGAATCTCGTTGGTTTTGTGTTAAGTCTTTTCTTGGAGAAATGTCTTGTAGTTCAATAGATTGGACTATGTATATTAAATTTGACTAAGAGATAAACTAGAGAATGGGAATAAAGAATGAGAAACGGTATTAGAAAGTTCTTTGAGGAAATTTAGATGTATTTTAAATTGAAGATGCATTTAGCTATAAACATAGTGGCTACGTTCCTCTTAGAGATGAGGAGAGAATTATATTCTATTATTATTTGGTTTCTTTTCTTCGTTTTTGTATGGTTTCAATACTTAATTGTCAAAAGTATCCTATAATTTTGTTGTTCATAGTGTTAACTGTTAACAGAATATAAAGCTTTTGAATACGTTTCA - >AT5G26030.1
ACACGCCTAACCTGCTTCAATGGAAAAGTCATACATTTACCTAACCAGACCTTCTTCGCATCTTCGTCTTCTTCCTTCGTGATCTCTCAAATTCTCTCCCTTTTAAAGTCCTAAATCAAAACCCTAAACCCATAAATCCAATCCCTCCATTCGAATTCTTCATTCTCTCTCTCTCTCTCTCTCACAATTACTGATCGGTTCTGAAATTTGTAGCTATGCAGGCAACGGCTTTATCATCTGGGTTCAATCCTCTAACGAAACGTAAAGATCACAGATTTCCCAGGTCATGCTCTCAGAGAAATTCTCTGTCTTTGATTCAATGCGATATAAAAGAGAGATCTTTCGGAGAGTCTATGACGATCACGAATCGTGGATTGAGTTTTAAGACGAATGTGTTTGAGCAAGCTCGTTCTGTGACTGGAGACTGTTCTTATGATGAAACTTCAGCTAAAGCACGTTCTCATGTTGTTGCAGAAGATAAGATTGGTGTCTTGCTTTTGAATTTAGGTGGTCCTGAAACTCTTAACGATGTTCAACCTTTCTTGTATAATCTCTTTGCTGATCCGGATATTATAAGGCTTCCTAGACCATTTCAGTTTCTTCAAGGGACTATAGCTAAGTTTATATCTGTTGTTCGTGCTCCGAAATCTAAAGAAGGGTATGCTGCTATTGGTGGTGGCTCTCCTTTGCGTAAAATAACTGATGAGCAAGCGGATGCTATTAAGATGTCTTTGCAAGCGAAGAACATTGCTGCTAATGTCTATGTTGGTATGCGGTATTGGTATCCGTTCACTGAGGAGGCTGTTCAGCAGATAAAGAAGGACAAAATTACTAGACTTGTTGTACTGCCATTGTATCCTCAGTATTCTATCTCTACAACGGGTTCAAGCATACGCGTTCTCCAAGATTTATTCAGGAAAGATCCGTACCTAGCTGGAGTGCCGGTAGCTATTATAAAGTCCTGGTACCAAAGGCGAGGCTATGTCAATTCTATGGCTGACCTCATTGAGAAGGAGCTTCAAACTTTCTCTGATCCTAAGGAGGTTATGATATTCTTCAGTGCCCATGGTGTTCCGGTCAGCTACGTAGAGAATGCTGGAGATCCGTACCAGAAGCAGATGGAAGAGTGTATTGACTTGATAATGGAAGAGCTAAAAGCCAGAGGGGTTCTTAACGACCATAAATTGGCATACCAGAGTCGTGTTGGCCCTGTTCAATGGCTGAAGCCATACACCGATGAGGTTCTTGTCGACCTTGGTAAGAGTGGTGTTAAGAGTCTACTAGCCGTTCCAGTCAGTTTCGTGAGTGAGCACATTGAGACACTTGAGGAGATAGACATGGAGTATAGGGAATTAGCTCTTGAGTCAGGGGTAGAGAACTGGGGACGGGTACCCGCGCTAGGTCTCACACCATCCTTCATCACCGACTTAGCTGATGCAGTGATAGAATCACTTCCTTCAGCAGAAGCAATGTCAAACCCAAATGCAGTGGTTGACTCAGAAGATAGCGAGTCGTCAGATGCTTTCAGTTACATTGTCAAGATGTTCTTCGGTTCGATTCTGGCTTTCGTCCTACTTCTCTCCCCAAAGATGTTCCATGCGTTCCGGAACCTATAGAATCTCGTTGGTTTTGTGTTAAGTCTTTTCTTGGAGAAATGTCTTGTAGTTCAATAGATTGGACTATGTATATTAAATTTGACTAAGAGATAAACTAGAGAATGGGAATAAAGAATGAGAAACGGTATTAGAAAGTTCTTTGAGGAAATTTAGATGTATTTTAAATTGAAGATGCATTTAGCTATAAACATAGTGGCTACGTTCCTCTTAGAGATGAGGAGAGAATTATATTCTATTATTATTTGGTTTCTTTTCTTCGTTTTTGTATGGTTTCAATACTTAATTGTCAAAAGTATCCTATAATTTTGTTGTTCATAGTGTTAACTGTTAACAGAATATAAAGCTTTTGAATACGTTTCA
CDS Sequence
Protein Sequence