Information report for AT5G25880
Gene Details
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Functional Descriptions
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0004471 — enables — malate dehydrogenase (decarboxylating) (NAD+) activity
- GO:0009536 — located in — plastid
- GO:0009507 — located in — chloroplast
- GO:0004473 — enables — malate dehydrogenase (decarboxylating) (NADP+) activity
- GO:0008948 — enables — oxaloacetate decarboxylase activity
- GO:0005829 — located in — cytosol
- GO:0009507 — is active in — chloroplast
- GO:0006108 — acts upstream of or within — malate metabolic process
- GO:0051287 — enables — NAD binding
- GO:0006090 — involved in — pyruvate metabolic process
- GO:0006108 — involved in — malate metabolic process
Literature and News
- Genomic evidence for COP1 as a repressor of light-regulated gene expression and development in Arabidopsis. DOI: 10.1105/tpc.004416 ; PMID: 12368493
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
- A comprehensive analysis of the NADP-malic enzyme gene family of Arabidopsis. DOI: 10.1104/pp.105.065953 ; PMID: 16113210
- Proteome mapping of mature pollen of Arabidopsis thaliana. DOI: 10.1002/pmic.200402011 ; PMID: 16247729
- A reference map of the Arabidopsis thaliana mature pollen proteome. DOI: 10.1016/j.bbrc.2005.09.185 ; PMID: 16242667
- 2-Hydroxy Acids in Plant Metabolism. DOI: 10.1199/tab.0182 ; PMID: 26380567
- Specific Arabidopsis thaliana malic enzyme isoforms can provide anaplerotic pyruvate carboxylation function in Saccharomyces cerevisiae. DOI: 10.1111/febs.14013 ; PMID: 28075062
- NADP-Dependent Malic Enzyme 1 Participates in the Abscisic Acid Response in Arabidopsis thaliana. DOI: 10.3389/fpls.2018.01637 ; PMID: 30459802
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
- Proteome mapping of mature pollen of Arabidopsis thaliana. DOI: 10.1002/pmic.200402011 ; PMID: 16247729
- A reference map of the Arabidopsis thaliana mature pollen proteome. DOI: 10.1016/j.bbrc.2005.09.185 ; PMID: 16242667
- The AP2/ERF domain transcription factor ORA59 integrates jasmonic acid and ethylene signals in plant defense. DOI: 10.1104/pp.108.117523 ; PMID: 18467450
Gene Resources
- UniProt: A0A1P8BDG6
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BDG6
- EnsemblPlants: AT5G25880.2
- Gramene: AT5G25880.2
- Orthologous matrix: YPNMVVQ
- ExpressionAtlas: AT5G25880
- InterPro: IPR001891, IPR012301, IPR012302
- PANTHER: PTHR23406, PTHR23406:SF64
- SUPFAM: SSF51735, SSF53223
- PROSITE: PS00331
- Gene3D: 3.40.50.10380, 3.40.50.720
- SWISS-MODEL: A0A1P8BDG6
- Conserved Domain Database: cd05312
Sequences
cDNA Sequence
- >AT5G25880.2
CTCAACTTCGACAAAAGAAAATAGGATTATTTCAGACCATAAGTCATTGTCTCCGCCTACAAAATCGGCGATTATTAATCACATTGTCTTCTTCTATGTTTGATCCACTTTAATCTCTTCATAAACATCATTTTTCCTCTAAAAGCTTTTTCCTTTACTCATCTTTTCTCTTCTGATCAAAATTGTGAATAATGGGCACCAATCAGACTCAGATCTCCGATGAATATGTTACCGGTAACAGTTCCGGTGTAGGTGGGGGAATCTCTGATGTATACGGTGAAGATAGTGCCACGTTGGATCAACTTGTCACTCCTTGGGTTACCTCTGTCGCAAGTGGGTATACATTGATGCGTGATCCACGTTACAATAAAGGACTTGCTTTTACTGATAAAGAGAGAGATGCTCATTACATAACTGGTCTTCTTCCTCCTGTAGTTTTATCTCAAGATGTTCAGGAGAGGAAAGTGATGCATAATCTTCGTCAGTATACGGTTCCTTTGCAACGTTACATGGCTCTCATGGATCTTCAGGAAAGGAATGAGAGATTGTTTTATAAGCTTTTGATTGATAATGTGGAGGAGTTGCTTCCGGTTGTGTATACACCGACGGTTGGTGAGGCTTGCCAAAAGTATGGGAGCATTTATAGGAGGCCACAAGGTCTTTACATCAGCTTGAAAGAGAAGGGAAAGATTCTTGAAGTATTGAAGAATTGGCCACAGAGAGGGATTCAAGTTATTGTTGTTACCGATGGTGAGCGGATTCTCGGTCTTGGAGATCTTGGTTGCCAGGGAATGGGAATCCCTGTTGGGAAGCTTTCTCTTTACACAGCTTTGGGAGGAATCCGTCCATCGGCTTGCCTTCCAATAACCATTGATGTGGGTACAAACAATGAGAAGCTGTTGAATAATGAGTTTTACATTGGCCTTAAACAGAAGAGGGCAAATGGCGAGGAATATGCAGAGTTTTTGCAGGAGTTTATGTGTGCTGTTAAACAAAACTATGGAGAGAAAGTGTTGGTGCAGTTTGAAGATTTTGCAAACCACCATGCGTTTGAGCTTCTCTCTAAGTACTGCTCAAGTCATCTCGTTTTCAATGATGATATCCAAGGAACTGCATCTGTGGTGCTTGCCGGGCTTATTGCGGCTCAGAAAGTACTTGGTAAAAGCCTAGCTGACCATACCTTTTTGTTCTTGGGTGCTGGAGAGGCTGGAACCGGAATCGCTGAGCTAATTGCTCTTAAAATTTCGAAAGAGACTGGAAAACCAATCGATGAGACCCGGAAGAAGATTTGGCTTGTGGACTCCAAGGGACTGATTGTTAGCGAACGCAAAGAATCGCTTCAACATTTCAAGCAGCCATGGGCGCATGACCACAAGCCTGTCAAGGAGCTCTTGGCAGCTGTTAATGCAATCAAGCCAACTGTTCTTATTGGAACCTCTGGTGTGGGTAAGACTTTCACAAAGGAAGTAGTGGAGGCCATGGCTACCTTGAACGAGAAACCATTGATTCTTGCACTCTCAAACCCAACTTCTCAAGCCGAGTGCACGGCGGAAGAAGCTTACACATGGACCAAGGGTCGTGCAATCTTTGCAAGTGGAAGCCCGTTTGACCCTGTTCAGTATGATGGCAAAAAATTCACGCCTGGCCAGGCAAACAACTGTTACATTTTCCCTGGTCTCGGTCTTGGTTTGATCATGTCCGGTGCCATTCGTGTCCGTGATGACATGCTTCTAGCAGCTTCGGAAGCGCTGGCCTCCCAAGTGACGGAAGAGAATTTTGCGAACGGACTGATCTATCCGCCTTTTGCAAACATCAGAAAGATCTCTGCTAACATTGCAGCCAGTGTGGGAGCCAAAACCTACGAACTCGGTTAGTTTCATAATTCTTGTTTTTTGATCATATTAAAAATAGGATCAGTCCAAAAAAAAAAATCTCCATGGCAAAAATCTTATGTCATGTACATGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTTTTGCAGGACTGGCATCGAATCTGCCTCGTCCTAAGGACCTCGTAAAGATGGCAGAGAGCTGCATGTACAGTCCTGTCTACAGAAACTTCCGTTAAAACATTCTTTTTAACATTTTTGGCTCAGCTTTTTACTTTTTGCTTTTCAGTTTTGGTGCTTTCTATATACGACAACTTCTAAACTATTTATACTTTTGCTTTAACTTTAAATAATGA - >AT5G25880.3
CTCAACTTCGACAAAAGAAAATAGGATTATTTCAGACCATAAGTCATTGTCTCCGCCTACAAAATCGGCGATTATTAATCACATTGTCTTCTTCTATGTTTGATCCACTTTAATCTCTTCATAAACATCATTTTTCCTCTAAAAGCTTTTTCCTTTACTCATCTTTTCTCTTCTGATCAAAATTGTGAATAATGGGCACCAATCAGACTCAGATCTCCGATGAATATGTTACCGGTAACAGTTCCGGTGTAGGTGGGGGAATCTCTGATGTATACGGTGAAGATAGTGCCACGTTGGATCAACTTGTCACTCCTTGGGTTACCTCTGTCGCAAGTGGGTATACATTGATGCGTGATCCACGTTACAATAAAGGACTTGCTTTTACTGATAAAGAGAGAGATGCTCATTACATAACTGGTCTTCTTCCTCCTGTAGTTTTATCTCAAGATGTTCAGGAGAGGAAAGTGATGCATAATCTTCGTCAGTATACGGTTCCTTTGCAACGTTACATGGCTCTCATGGATCTTCAGGAAAGGAATGAGAGATTGTTTTATAAGCTTTTGATTGATAATGTGGAGGAGTTGCTTCCGGTTGTGTATACACCGACGGTTGGTGAGGCTTGCCAAAAGTATGGGAGCATTTATAGGAGGCCACAAGGTCTTTACATCAGCTTGAAAGAGAAGGGAAAGATTCTTGAAGTATTGAAGAATTGGCCACAGAGAGGGATTCAAGTTATTGTTGTTACCGATGGTGAGCGGATTCTCGGTCTTGGAGATCTTGGTTGCCAGGGAATGGGAATCCCTGTTGGGAAGCTTTCTCTTTACACAGCTTTGGGAGGAATCCGTCCATCGGCTTGCCTTCCAATAACCATTGATGTGGGTACAAACAATGAGAAGCTGTTGAATAATGAGTTTTACATTGGCCTTAAACAGAAGAGGGCAAATGGCGAGGAATATGCAGAGTTTTTGCAGGAGTTTATGTGTGCTGTTAAACAAAACTATGGAGAGAAAGTGTTGGTGCAGTTTGAAGATTTTGCAAACCACCATGCGTTTGAGCTTCTCTCTAAGTACTGCTCAAGTCATCTCGTTTTCAATGATGATATCCAAGGAACTGCATCTGTGGTGCTTGCCGGGCTTATTGCGGCTCAGAAAGTACTTGGTAAAAGCCTAGCTGACCATACCTTTTTGTTCTTGGGTGCTGGAGAGGCTGGAACCGGAATCGCTGAGCTAATTGCTCTTAAAATTTCGAAAGAGACTGGAAAACCAATCGATGAGACCCGGAAGAAGATTTGGCTTGTGGACTCCAAGGGACTGATTGTTAGCGAACGCAAAGAATCGCTTCAACATTTCAAGCAGCCATGGGCGCATGACCACAAGCCTGTCAAGGAGCTCTTGGCAGCTGTTAATGCAATCAAGCCAACTGTTCTTATTGGAACCTCTGGTGTGGGTAAGACTTTCACAAAGGAAGTAGTGGAGGCCATGGCTACCTTGAACGAGAAACCATTGATTCTTGCACTCTCAAACCCAACTTCTCAAGCCGAGTGCACGGCGGAAGAAGCTTACACATGGACCAAGGGTCGTGCAATCTTTGCAAGTGGAAGCCCGTTTGACCCTGTTCAGTATGATGGCAAAAAATTCACGCCTGGCCAGGCAAACAACTGTTACATTTTCCCTGGTCTCGGTCTTGGTTTGATCATGTCCGGTGCCATTCGTGTCCGTGATGACATGCTTCTAGCAGCTTCGGAAGCGCTGGCCTCCCAAGTGACGGAAGAGAATTTTGCGAACGGACTGATCTATCCGCCTTTTGCAAACATCAGAAAGATCTCTGCTAACATTGCAGCCAGTGTGGGAGCCAAAACCTACGAACTCGGTTAGTTTCATAATTCTTGTTTTTTGATCATATTAAAAATAGGATCAGTCCAAAAAAAAAAATCTCCATGGCAAAAATCTTATGTCATGTACATGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTTTTGCAGGACTGGCATCGAATCTGCCTCGTCCTAAGGACCTCGTAAAGATGGCAGAGAGCTGCATGTACAGTCCTGTCTACAGAAACTTCCGTTAAAACATTCTTTTTAACATTTTTGGCTCAGCTTTTTACTTTTTGCTTTTCAGTTTTGGTGCTTTCTATATACGACAACTTCTAAACTATTTATACTTTTGCTTTAACTTTAAATAATGA - >AT5G25880.1
CTCAACTTCGACAAAAGAAAATAGGATTATTTCAGACCATAAGTCATTGTCTCCGCCTACAAAATCGGCGATTATTAATCACATTGTCTTCTTCTATGTTTGATCCACTTTAATCTCTTCATAAACATCATTTTTCCTCTAAAAGCTTTTTCCTTTACTCATCTTTTCTCTTCTGATCAAAATTGTGAATAATGGGCACCAATCAGACTCAGATCTCCGATGAATATGTTACCGGTAACAGTTCCGGTGTAGGTGGGGGAATCTCTGATGTATACGGTGAAGATAGTGCCACGTTGGATCAACTTGTCACTCCTTGGGTTACCTCTGTCGCAAGTGGGTATACATTGATGCGTGATCCACGTTACAATAAAGGACTTGCTTTTACTGATAAAGAGAGAGATGCTCATTACATAACTGGTCTTCTTCCTCCTGTAGTTTTATCTCAAGATGTTCAGGAGAGGAAAGTGATGCATAATCTTCGTCAGTATACGGTTCCTTTGCAACGTTACATGGCTCTCATGGATCTTCAGGAAAGGAATGAGAGATTGTTTTATAAGCTTTTGATTGATAATGTGGAGGAGTTGCTTCCGGTTGTGTATACACCGACGGTTGGTGAGGCTTGCCAAAAGTATGGGAGCATTTATAGGAGGCCACAAGGTCTTTACATCAGCTTGAAAGAGAAGGGAAAGATTCTTGAAGTATTGAAGAATTGGCCACAGAGAGGGATTCAAGTTATTGTTGTTACCGATGGTGAGCGGATTCTCGGTCTTGGAGATCTTGGTTGCCAGGGAATGGGAATCCCTGTTGGGAAGCTTTCTCTTTACACAGCTTTGGGAGGAATCCGTCCATCGGCTTGCCTTCCAATAACCATTGATGTGGGTACAAACAATGAGAAGCTGTTGAATAATGAGTTTTACATTGGCCTTAAACAGAAGAGGGCAAATGGCGAGGAATATGCAGAGTTTTTGCAGGAGTTTATGTGTGCTGTTAAACAAAACTATGGAGAGAAAGTGTTGGTGCAGTTTGAAGATTTTGCAAACCACCATGCGTTTGAGCTTCTCTCTAAGTACTGCTCAAGTCATCTCGTTTTCAATGATGATATCCAAGGAACTGCATCTGTGGTGCTTGCCGGGCTTATTGCGGCTCAGAAAGTACTTGGTAAAAGCCTAGCTGACCATACCTTTTTGTTCTTGGGTGCTGGAGAGGCTGGAACCGGAATCGCTGAGCTAATTGCTCTTAAAATTTCGAAAGAGACTGGAAAACCAATCGATGAGACCCGGAAGAAGATTTGGCTTGTGGACTCCAAGGGACTGATTGTTAGCGAACGCAAAGAATCGCTTCAACATTTCAAGCAGCCATGGGCGCATGACCACAAGCCTGTCAAGGAGCTCTTGGCAGCTGTTAATGCAATCAAGCCAACTGTTCTTATTGGAACCTCTGGTGTGGGTAAGACTTTCACAAAGGAAGTAGTGGAGGCCATGGCTACCTTGAACGAGAAACCATTGATTCTTGCACTCTCAAACCCAACTTCTCAAGCCGAGTGCACGGCGGAAGAAGCTTACACATGGACCAAGGGTCGTGCAATCTTTGCAAGTGGAAGCCCGTTTGACCCTGTTCAGTATGATGGCAAAAAATTCACGCCTGGCCAGGCAAACAACTGTTACATTTTCCCTGGTCTCGGTCTTGGTTTGATCATGTCCGGTGCCATTCGTGTCCGTGATGACATGCTTCTAGCAGCTTCGGAAGCGCTGGCCTCCCAAGTGACGGAAGAGAATTTTGCGAACGGACTGATCTATCCGCCTTTTGCAAACATCAGAAAGATCTCTGCTAACATTGCAGCCAGTGTGGGAGCCAAAACCTACGAACTCGGTTAGTTTCATAATTCTTGTTTTTTGATCATATTAAAAATAGGATCAGTCCAAAAAAAAAAATCTCCATGGCAAAAATCTTATGTCATGTACATGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTTTTGCAGGACTGGCATCGAATCTGCCTCGTCCTAAGGACCTCGTAAAGATGGCAGAGAGCTGCATGTACAGTCCTGTCTACAGAAACTTCCGTTAAAACATTCTTTTTAACATTTTTGGCTCAGCTTTTTACTTTTTGCTTTTCAGTTTTGGTGCTTTCTATATACGACAACTTCTAAACTATTTATACTTTTGCTTTAACTTTAAATAATGA
CDS Sequence
Protein Sequence