Gene Details:
- Gene ID: AT5G25580
- Gene Symbol: DDR5
- Gene Name: DDT-RELATED PROTEIN5
- Description: hypothetical protein;(source:Araport11)
- TAIR Accession: locus:2179494
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0003674 — enables — molecular_function
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0031010 — located in — ISWI-type complex
- GO:0005634 — located in — nucleus
- GO:0031213 — part of — RSF complex
Function-related keywords:
Literature:
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- A plant-specific SWR1 chromatin-remodeling complex couples histone H2A.Z deposition with nucleosome sliding. DOI: 10.15252/embj.2019102008 ; PMID: 32115743
- Dual Recognition of H3K4me3 and DNA by the ISWI Component ARID5 Regulates the Floral Transition in Arabidopsis. DOI: 10.1105/tpc.19.00944 ; PMID: 32358072
- DDT-RELATED PROTEIN4-IMITATION SWITCH alters nucleosome distribution to relieve transcriptional silencing in Arabidopsis. DOI: 10.1093/plcell/koad143 ; PMID: 37208763
Sequences:
cDNA Sequence
- >AT5G25580.1
CCCTAGGGTGTTGTAGGGTAAATTAGTAAATAGTAAAATCATTTCCTCTTTTGGCGGGAGAATTCCCCCAGAAAAATTCTCCAATTTTATACATTTTCCACTCCCACAAAAACCCATTCATCTTCCACTTTCTCTCTCCGACGAAAATGGTAACGCTCCGCCAGAGGACGATGGTGGTCACCGGAGAACCGGAACAGAAGAAGGAAGAAGAACGACTCTGCGAAGACTTAACGATTCTTTCCTCCGATTCAGACAACGATTCTTCCTCCGATTCGGCGGTGAAGCACTTGCGTGGACGTTGGGAACTTGCTTCGGTTCTCAATTTCTTCAATGTCTTTGGACCACTTGTCTCGGAGAAATTGAAGTTCACAGCTGAAGAAATTGAGATGGGTCTTATCGAGTCCAACACTACAAATGCTCAGCTTCACATTGCACTTTTGAAGGGGATACCACCGGTGAATAAAACGCTTGACGATGCAAATGCATGGATCACGGTGTTGTGTAAGAAACTAGCTCCATGGTGGCCATGGATTGCTAAGGGTGAAATTCATATTACTGTTAACAAAGGGGAGGAAATATCTGAATACCAAGGACTTGACTCTATTAACCGCCTGAAGATTTTGAAGGCACTTTGTGAGCTTCGAGTTCAACAAGATGATGCACGTTCGTATATTCAAGAAAATACCAAGGAAGGAGACTGGGATTCTAGTTTACGCAAGAGGAAGCTAGGAGGAGATGGAAAGAAGACTTCTTATTGGTTTGATGGTAATGATATCCAAGGTTACAGATTATATAGGGAAGTCAATGGAATCTCAAAGAAGAATGCTGGCTCAGATTTATCTTGTTTGAGCTGGGAAACTGAAGCAACCAATCTAGATGAATTTCAGAGTGTCGCTAGAGAGTTATCATCAAGCAAAGCTTCTTCTTTGGCTGCAACTGGGCAGATGATTGAGACAGAAGCTATACCCGTTGTTGAGAAATATCATAAAAAGAGAGAAAGGGCCATAAAAAAGAAAATGAAGGAAGAGATGGTCGTTAATGTCAATTTCTCGCGTCCTCTCCGAACTACTCGTTCTTGTCGTAACCACATGCCTGCTACTTACACCTTTGACGAGTATGACAAGATGATCAGTGATGCCGTGGAAGAAACAGAGGACACCGATGGAGATGAGGTAGAAGGAAGGGATCAACAAAGTGCCTCATTGGACTCAAACGATAAGTCAACAGAGGTTGAAGCAGCTGAAATCCACAATGACGATGATAAAGAGAATGAGATAAGCAAGGAGGACGCAGAGCCAAAGGAAGAGTTTGGTGCCAAAAACAGGTTGAGACAAAGAGTTACCAGGAACTCAGCCATCTGTTAATTTAATCCTCAATGTTGTTGAAGAAATAGTAAAAAGCTTTTGAACAACAAAACATCGTTTTGTCTGTTGGTGGAGAGACCAAGCTTTTTGATTAGAAGGTTTAGGACTTTTTTTGGTGTGTGGTGATATAATATATGATGATGATATACTCCATTCCTAACAGTGTAGATTTGACTCTTATTAATTATTATGTGGTATCTCCCCATCTTTG
CDS Sequence
Protein Sequence