Information report for AT5G25540
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:1901565 — acts upstream of or within — organonitrogen compound catabolic process
- GO:0044248 — acts upstream of or within — cellular catabolic process
- GO:0043130 — enables — ubiquitin binding
- GO:0005634 — located in — nucleus
Functional Keywords
Literature and News
- Four distinct classes of proteins as interaction partners of the PABC domain of Arabidopsis thaliana Poly(A)-binding proteins. DOI: 10.1007/s00438-004-1090-9 ; PMID: 15650869
- Light-dependent polyploidy control by a CUE protein variant in Arabidopsis. DOI: 10.1007/s11103-006-0053-4 ; PMID: 16897495
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
Gene Resources
- UniProt: C0Z2E4
- EMBL: AK318758, CP002688
- AlphaFoldDB: C0Z2E4
- EnsemblPlants: AT5G25540.2
- Gramene: AT5G25540.2
- ExpressionAtlas: AT5G25540
- InterPro: IPR003892, IPR038981, IPR041806
Sequences
cDNA Sequence
- >AT5G25540.2
CTAAAATGATACGACCTTCAAGTAAACGCTTCTTCTTCTTTGTTGCATATAAAAGTCCATTATTGATCAAAAGAGTCGTTTTCTTTCCTCTCCCCACTTTTTCAGCGTTTCTTAGATCTCTCTCTCTCTGCAAATATTCACCATTGTCTTCTTCTTCTTCAACGACGCTTTTGGATTTTCTTCTCTAAGCAATGAAGTCAGGAAGTTCTACATTGAATCCTTACGCAGCAGCTTATGTACCACTCTCGAAAAGAGAAGGTTCTTTGGTTGATACAAAGCCTGTCACACAACAACACATGCAGCAGCAGCACCACCAGCAACAACCTTATTATGGGTATGGAGTTCAAGGAATGGGAAGTTATCAAGGAACTCAAATGTCACCTAAGAAGTCACCATCTGAGATGGTATACAATCATCAGCTGAAGGATGAGGATTTGGAGATGGACATGGATATTGAGTATCTATTAGCTACATACCCTGGTCTTTCACAAGAGTCTATCAATGATGTTTACTTGGCTAACACTTGTGATCTTGATGCAACTATCGAAATGCTGAATCAACTCGAGGTAATTCATTCTTCAGTCTTCCTGCATTAAGCATAGTAATGACGTTTGGTGTTTCTTTTCTACAGATTTACAGTACTGAAGCTGAGGAATACCTTCCAGACACACTGGACATTGGTGATGTACCTGAGATCATCACAGAGTCTTCGAAACAAAAGAATGATGGGAGTAGTGCATCGTCATCTTCGGGTATCCGCAACGCTAACGTATCCTCCTCCTGATTTGATCAGTCCTTAAAAAAATGTGAAGTTTTTTTCTTCTTAAGTTTCTTTTGCAAATGGATGATATGAAGTTCATGATATATTGTTAGGAGATCTCTTTCTACATTTTCCCCACTTTGTCTCTGGGAAAAGAGAGTACAATGTATAGTTTTTAAGAAAGATTTCAGTTTGAGAATTTGGGAATTTTCTTTTGTGGTTTTGAGAAAAGCTATGAATTACAACCTCTGCTCTTGGTGCTCGATATTAATATGAATCTCTCTTATCTATTACCGTATCAATGATATGTTGCTATGTT - >AT5G25540.3
CTAAAATGATACGACCTTCAAGTAAACGCTTCTTCTTCTTTGTTGCATATAAAAGTCCATTATTGATCAAAAGAGTCGTTTTCTTTCCTCTCCCCACTTTTTCAGCGTTTCTTAGATCTCTCTCTCTCTGCAAATATTCACCATTGTCTTCTTCTTCTTCAACGACGCTTTTGGATTTTCTTCTCTAAGCAATGAAGTCAGGAAGTTCTACATTGAATCCTTACGCAGCAGCTTATGTACCACTCTCGAAAAGAGAAGGTTCTTTGGTTGATACAAAGCCTGTCACACAACAACACATGCAGCAGCAGCACCACCAGCAACAACCTTATTATGGGTATGGAGTTCAAGGAATGGGAAGTTATCAAGGAACTCAAATGTCACCTAAGAAGTCACCATCTGAGATGGTATACAATCATCAGCTGAAGGATGAGGATTTGGAGATGGACATGGATATTGAGTATCTATTAGCTACATACCCTGGTCTTTCACAAGAGTCTATCAATGATGTTTACTTGGCTAACACTTGTGATCTTGATGCAACTATCGAAATGCTGAATCAACTCGAGGTAATTCATTCTTCAGTCTTCCTGCATTAAGCATAGTAATGACGTTTGGTGTTTCTTTTCTACAGATTTACAGTACTGAAGCTGAGGAATACCTTCCAGACACACTGGACATTGGTGATGTACCTGAGATCATCACAGAGTCTTCGAAACAAAAGAATGATGGGAGTAGTGCATCGTCATCTTCGGGTATCCGCAACGCTAACGTATCCTCCTCCTGATTTGATCAGTCCTTAAAAAAATGTGAAGTTTTTTTCTTCTTAAGTTTCTTTTGCAAATGGATGATATGAAGTTCATGATATATTGTTAGGAGATCTCTTTCTACATTTTCCCCACTTTGTCTCTGGGAAAAGAGAGTACAATGTATAGTTTTTAAGAAAGATTTCAGTTTGAGAATTTGGGAATTTTCTTTTGTGGTTTTGAGAAAAGCTATGAATTACAACCTCTGCTCTTGGTGCTCGATATTAATATGAATCTCTCTTATCTATTACCGTATCAATGATATGTTGCTATGTT - >AT5G25540.1
CTAAAATGATACGACCTTCAAGTAAACGCTTCTTCTTCTTTGTTGCATATAAAAGTCCATTATTGATCAAAAGAGTCGTTTTCTTTCCTCTCCCCACTTTTTCAGCGTTTCTTAGATCTCTCTCTCTCTGCAAATATTCACCATTGTCTTCTTCTTCTTCAACGACGCTTTTGGATTTTCTTCTCTAAGCAATGAAGTCAGGAAGTTCTACATTGAATCCTTACGCAGCAGCTTATGTACCACTCTCGAAAAGAGAAGGTTCTTTGGTTGATACAAAGCCTGTCACACAACAACACATGCAGCAGCAGCACCACCAGCAACAACCTTATTATGGGTATGGAGTTCAAGGAATGGGAAGTTATCAAGGAACTCAAATGTCACCTAAGAAGTCACCATCTGAGATGGTATACAATCATCAGCTGAAGGATGAGGATTTGGAGATGGACATGGATATTGAGTATCTATTAGCTACATACCCTGGTCTTTCACAAGAGTCTATCAATGATGTTTACTTGGCTAACACTTGTGATCTTGATGCAACTATCGAAATGCTGAATCAACTCGAGGTAATTCATTCTTCAGTCTTCCTGCATTAAGCATAGTAATGACGTTTGGTGTTTCTTTTCTACAGATTTACAGTACTGAAGCTGAGGAATACCTTCCAGACACACTGGACATTGGTGATGTACCTGAGATCATCACAGAGTCTTCGAAACAAAAGAATGATGGGAGTAGTGCATCGTCATCTTCGGGTATCCGCAACGCTAACGTATCCTCCTCCTGATTTGATCAGTCCTTAAAAAAATGTGAAGTTTTTTTCTTCTTAAGTTTCTTTTGCAAATGGATGATATGAAGTTCATGATATATTGTTAGGAGATCTCTTTCTACATTTTCCCCACTTTGTCTCTGGGAAAAGAGAGTACAATGTATAGTTTTTAAGAAAGATTTCAGTTTGAGAATTTGGGAATTTTCTTTTGTGGTTTTGAGAAAAGCTATGAATTACAACCTCTGCTCTTGGTGCTCGATATTAATATGAATCTCTCTTATCTATTACCGTATCAATGATATGTTGCTATGTT
CDS Sequence
Protein Sequence