Information report for AT5G25250
Gene Details
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Functional Descriptions
- GO:0071456 — acts upstream of or within — cellular response to hypoxia
- GO:0003674 — enables — molecular_function
- GO:0006897 — acts upstream of or within — endocytosis
- GO:0000325 — located in — plant-type vacuole
- GO:0005886 — located in — plasma membrane
- GO:0044853 — located in — plasma membrane raft
- GO:0005886 — is active in — plasma membrane
- GO:0044853 — is active in — plasma membrane raft
- GO:0005768 — located in — endosome
- GO:0009536 — located in — plastid
- GO:0009506 — located in — plasmodesma
- GO:0010324 — acts upstream of or within — membrane invagination
- GO:0005737 — located in — cytoplasm
Functional Keywords
Literature and News
- Analysis of detergent-resistant membranes in Arabidopsis. Evidence for plasma membrane lipid rafts. DOI: 10.1104/pp.104.053041 ; PMID: 15618420
- Microarray analysis of genes that respond to gamma-irradiation in Arabidopsis. DOI: 10.1021/jf0486895 ; PMID: 15713015
- A comprehensive structure-function analysis of Arabidopsis SNI1 defines essential regions and transcriptional repressor activity. DOI: 10.1105/tpc.105.039677 ; PMID: 16766691
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The AP2/ERF transcription factor AtERF73/HRE1 modulates ethylene responses during hypoxia in Arabidopsis. DOI: 10.1104/pp.111.172486 ; PMID: 21398256
- Single-molecule analysis of PIP2;1 dynamics and partitioning reveals multiple modes of Arabidopsis plasma membrane aquaporin regulation. DOI: 10.1105/tpc.111.091454 ; PMID: 22010034
- A membrane microdomain-associated protein, Arabidopsis Flot1, is involved in a clathrin-independent endocytic pathway and is required for seedling development. DOI: 10.1105/tpc.112.095695 ; PMID: 22589463
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Cell wall contributes to the stability of plasma membrane nanodomain organization of Arabidopsis thaliana FLOTILLIN2 and HYPERSENSITIVE INDUCED REACTION1 proteins. DOI: 10.1111/tpj.14566 ; PMID: 31610051
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- The AP2/ERF domain transcription factor ORA59 integrates jasmonic acid and ethylene signals in plant defense. DOI: 10.1104/pp.108.117523 ; PMID: 18467450
Gene Resources
- UniProt: A0A178UMD2
- EMBL: CACRSJ010000110, CACSHJ010000096, LUHQ01000005
- AlphaFoldDB: A0A178UMD2
- ExpressionAtlas: AT5G25250
- InterPro: IPR001107, IPR027705, IPR036013
- PANTHER: PTHR13806, PTHR13806:SF31
- SUPFAM: SSF117892
- Gene3D: 3.30.479.30
- OrthoDB: A0A178UMD2
- Conserved Domain Database: cd03399
Sequences
cDNA Sequence
- >AT5G25250.1
ATAACGCACGACTATATATATATAATAAGTCCTTAAGAACTCAAAACAAAGTCTTCTAAATCATTTGGGCGAAAAGTCCAAATTAAATCAAAAGATGTTCAAAGTTGCAAGAGCGTCACAGTATTTGGCGATCACCGGTGCTGGTATCGAAGACATCAAGCTTTCCAAGAAGTCATGGGTGTTTCCATGGCAATCTTGCACCGTCTTCGACGTTTCTCCGGTGAACTATACTTTCAAAGTCCAAGCCATGAGCGCAGAGAAGCTTCCTTTTGTTCTTCCCGCTGTTTTTACGATTGGTCCTCGCGTTGATGACGATGACGCGCTGATTTTGTATGCTAGGTTGATTTCTCCTCATGATAAAGATTCAAATCATGTCCATGAGCTTGTTGAAGGTGTTATTGAAGGAGAGACTCGTGTTCTTGCTGCTTCCATGACTATGGAAGAGATCTTTAAAGGGACAAAGGAGTTTAAGAAGGAGGTGTTTGATAAGGTTCAACTAGAATTAAACCAGTTTGGTCTTGTGATATACAATGCCAATGTGAAGCAGCTCGTTGATGTGCCTGGACATGAATACTTCTCTTACTTGGGTCAGAAGACTCAAATGGAAGCAGCAAATCAGGCTAGGATCGATGTCTCTGAGGCCAAGATGAAGGGAGAGATCGGTGCCAAGGAACGGACTGGTCTTACTCTCCAGAACGCAGCCAAAATTGACGCTGAGTCAAAGATCATATCGATGCAGAGGCAAGGAGAAGGAACAAAAGAAGAAATCAAAGTGAGGACTGAGGTTAAAGTGTTTGAGAATCAGAAGGAGGCTGATGTAGCTAAGGCCAATGCCGAGCTTGCGATGAAAAAAGCTGCTTGGACTAAGGATGCTCAGGTGGCTGAGGTTGAAGCAACCAAGGCCGTGGCTTTGAGAGAAGCTGAGCTTCAGACTCAGGTCGAGAAAATGAACGCTTTGACTCGAACAGAGAAGCTCAAGGCTGAGTTCCTTAGCAAAGCTAGTGTTGAGTATGAAACCAAGGTTCAAGAAGCAAATTGGGAACTATACAACAAGCAGAAACAAGCAGAGGCGGTTCTATACGAGAAACAAAAGCAAGCCGAGGCACAGAAAGCGCAAGCGGATGCGGCTTTCTACTCAAAGCAGAAAGAAGCAGAGGGACTTGTTGCCTTAGCTAGTGCGCAAGGGACTTATCTAAGAACCCTCTTAGACGCTGTTCAGAATGACTATTCTTGTCTTAGAGACTTCTTGATGATTAACAATGGTATTTATCAAGAGATCGCTAAGACTAATGCGATGGCGGTTAGAGACTTGCAGCCCAAGATTAGTGTTTGGAACCATGGTGGAGAACAGGGTGGTGGTAGTGGGAATGCTATGAAGGATATAGCTGGACTTTACAAGATGTTGCCTCCGGTTCTTGATACGGTTTATGAGCAGACTGGGATGCAGCCACCTGCTTGGATCGGTACTCTACGTGGTGCGGAACCGAAGCAAGTGACTCGCAGCTAAGAGAATAGTGGCATGGTTTGGTCGTTTACTTGTGGTTGAAGATACATCCATGCGAATGTAATTTTTTATTATTTTAATCCTGTTGGAGGACTTGGCTTATTCTTGTGTGTGTTTTGAAGTGTGTTATTGATATTCTTAATTGAATCGTATTCGTATATGTTGAAAATAAATTAAAATGAGGAATAACCAAAACCAGAGAATTATTT
CDS Sequence
Protein Sequence