Information report for AT5G25150
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009049 — inflorescence — inflorescencia (Spanish, exact), 花序 (Japanese, exact), Triticeae spike (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0005515 — enables — protein binding
- GO:0005634 — located in — nucleus
- GO:0005669 — part of — transcription factor TFIID complex
- GO:0016251 — contributes to — RNA polymerase II general transcription initiation factor activity
- GO:0006367 — involved in — transcription initiation at RNA polymerase II promoter
Functional Keywords
Literature and News
- Yeast two-hybrid map of Arabidopsis TFIID. DOI: 10.1007/s11103-007-9135-1 ; PMID: 17340043
- TBP-associated factors in Arabidopsis. DOI: 10.1016/j.gene.2004.08.023 ; PMID: 15527982
- Three functionally redundant plant-specific paralogs are core subunits of the SAGA histone acetyltransferase complex in Arabidopsis. DOI: 10.1016/j.molp.2021.03.014 ; PMID: 33737195
- Conserved and plant-specific histone acetyltransferase complexes cooperate to regulate gene transcription and plant development. DOI: 10.1038/s41477-023-01359-3 ; PMID: 36879016
Gene Resources
- UniProt: A0A1P8BA79
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BA79
- EnsemblPlants: AT5G25150.2
- Gramene: AT5G25150.2
- ExpressionAtlas: AT5G25150
- InterPro: IPR001680, IPR007582, IPR015943
- PANTHER: PTHR19879, PTHR19879:SF1
- SUPFAM: SSF160897, SSF50978
- PROSITE: PS00678, PS50082, PS50294
- Gene3D: 1.25.40.500, 2.130.10.10
- OrthoDB: A0A1P8BA79
- SWISS-MODEL: A0A1P8BA79
- Conserved Domain Database: cd00200, cd08044
Sequences
cDNA Sequence
- >AT5G25150.2
ACAAGTTTCTAGGAGAGGAAATTGAATCGAGAGAGAGAGAGAGAGACAACAATGGATCCAGAGCAAATCAACGAGTTCGTCGTGGGCTACTTGAAGAAGAAAGGATTCAGTAGCGCTGCTAAAGACCTTGAATCTTATCATCACCAGAACAATAATGGTAGCTCCTTCACTTCTGTCGATTATCATAACGATCCTGAGCTCACGAAGCTCATTCGCTCCTTTTCTCAACAAGAAGATGATCCAACTCGGTACCGTGAAGGTTACAGCAAACTAAGGTCATGGGCGTATAATTCTCTGGATTTATATAAGCATGAATTGCTTCGAGTGATGTATCCTGTGTTTATTCATTGTTACATGGATCTGGTGGGGAAAGGGCACACTCAAGAAGCTAGAGCCTTCTTTAACAGCTTCCGCAAAGATCATGAGATGGTACACTTACGGGATCTTCAGAAGCTTGAAGGCGTGCTTTCTCCATCTCATCTAGAGGAGATGGAGTTTGCTCGTTCTCTTAGAAAAAGCAAGGTTAACATCAAGTTTTGTCAGTATTCATATGAGCTGTTACTTCAGTATCTACATAGTACAGTATCGACTTTAATGCTTGGTATTATTAACGAGCACATCAATTTCCAAGTCTACTCGGGACAGCCTACTTCCTCATCCGATGACATAGAAGCTGTCACCATTGTCGGGAGTTTTCAGGACACTGCTAATCACATTAATCAAAAAGAAATACAGTGGGGATTGCTTGAAGATTCACTAGAAGATCGCCTTGAGAAGACAGGAGGTCTGCTGTCTGATTCTGAGAAGGGACAAGGAGAAAGTAAAGACGGGGATGCAGATGATAGTAAGAAAAGATCCACTGAAATTGGAAAGCAAGGCTCTTCCTTAAAAAAGTTGAAGAAGGACAAAGCGGGTAATGCAACAGCAAAAGTTGCACGTCTGGAGACCATTACGGTGTCACCGGCGCCGCGTGTAAAACCAGAACTTGCCTTGCCAGTAATGTCCACAGATGTAGAGCAATCCATCCTTGAAGACCTTAGAAACCGTGTGCAGTTGAGTAGTGTTGCAATGCCATCAGTCAGCTTTTATACATTTGTGAATACTCATAACGGGTTAAACTGTTCATCTATATCTCATGATGGATCTCTGGTTGCTGGTGGGTTCTCAGATTCTTCAATAAAGGTCTGGGACATGGCTAAGATAGGACAAGCTGGCAGTGGTGCTTTGCAGGCTGAAAATGATTCAAGTGATCAAAGCATAGGACCAAATGGCAGAAGAAGTTATACATTATTACTGGGTCATTCAGGGCCAGTTTACTCAGCCACTTTCAGTCCCCCTGGAGATTTTGTTCTATCTTCTTCAGCAGATACAACAATACGACTGTGGAGCACAAAACTAAATGCTAATCTCGTGTGCTACAAGGGTCATAATTACCCTGTATGGGATGCCCAGTTTAGCCCTTTCGGTCATTACTTTGCAAGCTGTTCTCATGATCGTACTGCACGGATTTGGTCAATGGACCGAATACAACCTCTTCGGATAATGGCAGGGCATCTATCTGATGTTGATTGTGTACAGTGGCATCCCAATTGTAACTACATTGCTACCGGTAGTAGTGATAAGACGGTTAGACTCTGGGATGTGCAAACTGGAGAATGTGTCCGGATATTCATTGGGCACAGGAGTATGGTTTTATCATTGGCGATGTCTCCAGATGGGAGATATATGGCTTCCGGTGATGAAGATGGCACTATAATGATGTGGGACCTCTCAACTGCTCGCTGCATCACTCCTCTCATGGGCCATAATTCATGTGTCTGGAGTCTCTCATACAGCGGGGAGGGCTCTCTTCTGGCTTCTGGATCCGCAGACTGCACAGTGAAACTGTGGGACGTCACTTCAAGTACCAAATTGACAAAGGCCGAGGAAAAGAATGGAAACTCGAACAGATTGCGCTCACTCAGGACTTTCCCCACCAAGTCCACACCAGTTCACGCTCTCCGGGTAAGTTATGCTTTCTTTACTAGAATTAATTCCACCATTCTCTAAACACCGTGGTATTTCTCTCATCCCTAAGTTTATCATGTTGTGCTTGTGATCAACACATCCCGATAATGAGTGACCAAACACTTGATTAGAACCAAAGTTTCAGGGTGTGTGCCAAACAGATTTTATCCATCAGTATCATATAGAACCTTTCCTCTAACACCTAGGATTCGTTGATCGAGGCATACACTAAAACTCATGTTTTACATTGATGCAGTTTTCTCGGAGAAATTTGTTGTTTGCTGCAGGAGCGATCTCTAAACCCGCAAACTGATCAAAACAATGGTATCAGATATTGATGCTTTAACATTCTTACAAGCTGTTGTAGATCTCAGAAGAAATCAGGTGTAGAATAGTTATCTCCAAAGATTATTTGCTTGTGGCTTTTGTTTCTCATTTCTAAATCCCAAAAATGTTGAAGATTCTTTTAATGAACAACTACTCCTGCTTATGTATGCCATGTGTCCCAATCCAGGAATCACTTATCTTCGACTTGGAGCAGATTTACTTTAAGCATGTCAAAG - >AT5G25150.1
ACAAGTTTCTAGGAGAGGAAATTGAATCGAGAGAGAGAGAGAGAGACAACAATGGATCCAGAGCAAATCAACGAGTTCGTCGTGGGCTACTTGAAGAAGAAAGGATTCAGTAGCGCTGCTAAAGACCTTGAATCTTATCATCACCAGAACAATAATGGTAGCTCCTTCACTTCTGTCGATTATCATAACGATCCTGAGCTCACGAAGCTCATTCGCTCCTTTTCTCAACAAGAAGATGATCCAACTCGGTACCGTGAAGGTTACAGCAAACTAAGGTCATGGGCGTATAATTCTCTGGATTTATATAAGCATGAATTGCTTCGAGTGATGTATCCTGTGTTTATTCATTGTTACATGGATCTGGTGGGGAAAGGGCACACTCAAGAAGCTAGAGCCTTCTTTAACAGCTTCCGCAAAGATCATGAGATGGTACACTTACGGGATCTTCAGAAGCTTGAAGGCGTGCTTTCTCCATCTCATCTAGAGGAGATGGAGTTTGCTCGTTCTCTTAGAAAAAGCAAGGTTAACATCAAGTTTTGTCAGTATTCATATGAGCTGTTACTTCAGTATCTACATAGTACAGTATCGACTTTAATGCTTGGTATTATTAACGAGCACATCAATTTCCAAGTCTACTCGGGACAGCCTACTTCCTCATCCGATGACATAGAAGCTGTCACCATTGTCGGGAGTTTTCAGGACACTGCTAATCACATTAATCAAAAAGAAATACAGTGGGGATTGCTTGAAGATTCACTAGAAGATCGCCTTGAGAAGACAGGAGGTCTGCTGTCTGATTCTGAGAAGGGACAAGGAGAAAGTAAAGACGGGGATGCAGATGATAGTAAGAAAAGATCCACTGAAATTGGAAAGCAAGGCTCTTCCTTAAAAAAGTTGAAGAAGGACAAAGCGGGTAATGCAACAGCAAAAGTTGCACGTCTGGAGACCATTACGGTGTCACCGGCGCCGCGTGTAAAACCAGAACTTGCCTTGCCAGTAATGTCCACAGATGTAGAGCAATCCATCCTTGAAGACCTTAGAAACCGTGTGCAGTTGAGTAGTGTTGCAATGCCATCAGTCAGCTTTTATACATTTGTGAATACTCATAACGGGTTAAACTGTTCATCTATATCTCATGATGGATCTCTGGTTGCTGGTGGGTTCTCAGATTCTTCAATAAAGGTCTGGGACATGGCTAAGATAGGACAAGCTGGCAGTGGTGCTTTGCAGGCTGAAAATGATTCAAGTGATCAAAGCATAGGACCAAATGGCAGAAGAAGTTATACATTATTACTGGGTCATTCAGGGCCAGTTTACTCAGCCACTTTCAGTCCCCCTGGAGATTTTGTTCTATCTTCTTCAGCAGATACAACAATACGACTGTGGAGCACAAAACTAAATGCTAATCTCGTGTGCTACAAGGGTCATAATTACCCTGTATGGGATGCCCAGTTTAGCCCTTTCGGTCATTACTTTGCAAGCTGTTCTCATGATCGTACTGCACGGATTTGGTCAATGGACCGAATACAACCTCTTCGGATAATGGCAGGGCATCTATCTGATGTTGATTGTGTACAGTGGCATCCCAATTGTAACTACATTGCTACCGGTAGTAGTGATAAGACGGTTAGACTCTGGGATGTGCAAACTGGAGAATGTGTCCGGATATTCATTGGGCACAGGAGTATGGTTTTATCATTGGCGATGTCTCCAGATGGGAGATATATGGCTTCCGGTGATGAAGATGGCACTATAATGATGTGGGACCTCTCAACTGCTCGCTGCATCACTCCTCTCATGGGCCATAATTCATGTGTCTGGAGTCTCTCATACAGCGGGGAGGGCTCTCTTCTGGCTTCTGGATCCGCAGACTGCACAGTGAAACTGTGGGACGTCACTTCAAGTACCAAATTGACAAAGGCCGAGGAAAAGAATGGAAACTCGAACAGATTGCGCTCACTCAGGACTTTCCCCACCAAGTCCACACCAGTTCACGCTCTCCGGGTAAGTTATGCTTTCTTTACTAGAATTAATTCCACCATTCTCTAAACACCGTGGTATTTCTCTCATCCCTAAGTTTATCATGTTGTGCTTGTGATCAACACATCCCGATAATGAGTGACCAAACACTTGATTAGAACCAAAGTTTCAGGGTGTGTGCCAAACAGATTTTATCCATCAGTATCATATAGAACCTTTCCTCTAACACCTAGGATTCGTTGATCGAGGCATACACTAAAACTCATGTTTTACATTGATGCAGTTTTCTCGGAGAAATTTGTTGTTTGCTGCAGGAGCGATCTCTAAACCCGCAAACTGATCAAAACAATGGTATCAGATATTGATGCTTTAACATTCTTACAAGCTGTTGTAGATCTCAGAAGAAATCAGGTGTAGAATAGTTATCTCCAAAGATTATTTGCTTGTGGCTTTTGTTTCTCATTTCTAAATCCCAAAAATGTTGAAGATTCTTTTAATGAACAACTACTCCTGCTTATGTATGCCATGTGTCCCAATCCAGGAATCACTTATCTTCGACTTGGAGCAGATTTACTTTAAGCATGTCAAAG
CDS Sequence
Protein Sequence