Information report for AT5G25100
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0009506 — located in — plasmodesma
- GO:0005739 — located in — mitochondrion
- GO:0005794 — located in — Golgi apparatus
- GO:0005797 — located in — Golgi medial cisterna
- GO:0009536 — located in — plastid
- GO:0005802 — located in — trans-Golgi network
- GO:0005768 — located in — endosome
- GO:0016020 — is active in — membrane
Functional Keywords
Literature and News
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Proteomics investigation of endogenous S-nitrosylation in Arabidopsis. DOI: 10.1016/j.bbrc.2011.11.036 ; PMID: 22115780
- The Golgi-localized Arabidopsis endomembrane protein12 contains both endoplasmic reticulum export and Golgi retention signals at its C terminus. DOI: 10.1105/tpc.112.096057 ; PMID: 22570441
- Label-free protein quantification for plant Golgi protein localization and abundance. DOI: 10.1104/pp.114.245589 ; PMID: 25122472
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Gene Resources
- UniProt: A0A178UH56
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A178UH56
- EnsemblPlants: AT5G25100.1
- Gramene: AT5G25100.1
- KEGG: ath:AT5G25100
- Orthologous matrix: HEYEGNW
- ExpressionAtlas: AT5G25100
- InterPro: IPR004240, IPR036259
- PANTHER: PTHR10766, PTHR10766:SF110
- SUPFAM: SSF103473
- OrthoDB: A0A178UH56
- SWISS-MODEL: A0A178UH56
Sequences
cDNA Sequence
- >AT5G25100.1
CGAAGCAATAACGGAGAGAGAAACAAGGATCTAATTCATAGTGCTGCTTCTTCTTCTCTCTGAGACTCTCACAAAATAGAAACACAAGATCGTTAAAAAGCTTTTAGCTCCAGATCTGTGGAACCGCCATAGCTATGGAGTTTTATAGAAGTTCTAGAAGATTACAAATTCTTGGATCTGTGATTCTTCTGCTCTCTATTCATGTCGCTCACTCTTTTTACCTTCCTGGTGTTGCTCCTCAGGATTTCGAAAAGGGAGATGAATTGAAAGTGAAAGTAAACAAGTTGACATCTATAAAGACTCAGCTTCCATATTCGTATTACTCTCTTCCTTTTTGTCGTCCTAAGAAGATTGTGGACAGTACTGAGAATCTTGGTGAAGTTCTTCGTGGTGACCGAATCGAAAATGCTCCTTATTCGTTTAAAATGCGTGAGGCGCAAATGTGTAATGTTCTCGGTCGTGTTATGCTTGATGCAAAGTCTGCCAAAGCGTTTAAAGAGAAGATTGATGATGAGTATCGAGTTAACATGATCCTTGATAATCTTCCTCTAGTGGTTCCGATCGAAAGAATTGATCCGGGTCAGGGTTCTCCTTCTGTTGTGTATCAGCTAGGATATCATGTTGGTCTTAAAGGCCAGTATGAAGGGAGCAAAGAGCAAAAGTATTTTATGCACAATCACTTGGCATTCACTGTCCGGTATCATAGAGATATGCAAACCGATGCTGCAAGGATTGTGGGATTTGAGGTCAAACCATACAGTGTCAAGCATGAATACGAGGGACAATGGAGTGAGAAGACCCGTTTGACTACCTGTGATCCCCACACTAAGCGACTGGTTGTTAGCTCAGCTACCCCTCAAGAAGTCGAAAATAAGAAAGAAATTATCTTCACATATGATGTTGACTTTCAGGAAAGTGAAGTGAAGTGGGCGTCTAGATGGGATGCTTATCTTTTGATGAGCGACAATCAAATTCACTGGTTTTCTATTGTCAACTCTCTTATGATCGTCCTCTTCCTCTCTGGTATGGTAGCGATGATTATGCTAAGGACCCTTTACCGTGACATTTCACGGTACAACGAGCTTGAGACTCAAGAGGAAGCTCAAGAAGAGACTGGGTGGAAACTCGTCCATGGTGATGTTTTCAGGCCTCCAGCCAATTCAGATCTTCTCTGCGTCTATGTTGGCACAGGTGTCCAGTGTTTAGGCATGGTACTTGTCACTATGATCTTCGCCATGCTCGGATTTTTATCACCTTCCAACCGTGGAGGTCTTATGACAGCCATGCTCCTCCTCTGGGTCTTCATGGGACTCTTTGCCGGTTACGCCTCTTCACGTCTCTACAAAATGTTCAAAGGAACAGAATGGAAGAGAATTGCCTTCAGAACAGCCTTCTTGTTCCCTGCAGTCGTCTCAGCCATCTTCTTTGTCCTAAACGCTCTCATCTGGGGACAAAAATCATCCGGAGCTGTTCCCTTTGGAACAATGTTTGCTCTGATCTTCCTCTGGTTTGGAATCTCGGTCCCTCTTGTCTTTGTCGGCGCTTACCTCGGATTCAAGAAGCCACCGCTCGATGACCCCGTGAAAACCAACAAAATCCCACGTCAAATCCCGGAGCAAGCTTGGTACATGAACCCAATTTTCTCAATCCTCATTGGAGGAATCTTACCGTTCGGTGCAGTCTTCATCGAGCTCTTCTTCATCCTCACATCCATCTGGCTCAACCAGTTCTACTACATCTTCGGTTTCCTCTTCCTCGTCTTTGTGATCCTTATGGTCACCTGCGCCGAGATCACCATTGTTCTCTGCTACTTCCAGCTTTGCAGTGAAGACTATCTCTGGTGGTGGAGGTCTTACCTCACCTCAGGCTCTTCTGCGGTCTATCTCTTCCTCTACGCAGCCTTCTATTTCTTCACAAAGCTCCAGATCACTAAGCTCGTCTCAGCTATGCTCTACTTTGGATACATGCTCATCGCCTCTTACGCGTTTTTCGTGCTGACCGGAACAATCGGGTTCTACGCTTGTCTCTGGTTCACAAGACTCATCTATTCCTCGGTAAAGATCGATTGATTCAGAAAAACATTCAAGAGAAGTACGAAAGAAAGAAGGAAGGTAATATAGTTAATGATTTTCACAAGTTTGTTTTTGCTCAATAGGGGTCTCTTCTTGTTTCGCTCTGGTTTTGGTTTACAAGTAACAAAAGAAAAGGTTTTATATGTAAACCTTTTCTTTTTTTAGAGTGTATTCTGTTTGATTTTCCCAAATGTCACTTTGGATTATCTTCCTTAATTGACAATTATGTGATTCTTTCATTTCTATTTATATTTTTATACTCTCTTGTAAACTTTACTTTAGCATTTTCTTGATTACATCAAATTCTAAGCACTCTCTTCCCGTTAATTGCGTTTTGCGGACATCAATAAATT - >AT5G25100.2
CGAAGCAATAACGGAGAGAGAAACAAGGATCTAATTCATAGTGCTGCTTCTTCTTCTCTCTGAGACTCTCACAAAATAGAAACACAAGATCGTTAAAAAGCTTTTAGCTCCAGATCTGTGGAACCGCCATAGCTATGGAGTTTTATAGAAGTTCTAGAAGATTACAAATTCTTGGATCTGTGATTCTTCTGCTCTCTATTCATGTCGCTCACTCTTTTTACCTTCCTGGTGTTGCTCCTCAGGATTTCGAAAAGGGAGATGAATTGAAAGTGAAAGTAAACAAGTTGACATCTATAAAGACTCAGCTTCCATATTCGTATTACTCTCTTCCTTTTTGTCGTCCTAAGAAGATTGTGGACAGTACTGAGAATCTTGGTGAAGTTCTTCGTGGTGACCGAATCGAAAATGCTCCTTATTCGTTTAAAATGCGTGAGGCGCAAATGTGTAATGTTCTCGGTCGTGTTATGCTTGATGCAAAGTCTGCCAAAGCGTTTAAAGAGAAGATTGATGATGAGTATCGAGTTAACATGATCCTTGATAATCTTCCTCTAGTGGTTCCGATCGAAAGAATTGATCCGGGTCAGGGTTCTCCTTCTGTTGTGTATCAGCTAGGATATCATGTTGGTCTTAAAGGCCAGTATGAAGGGAGCAAAGAGCAAAAGTATTTTATGCACAATCACTTGGCATTCACTGTCCGGTATCATAGAGATATGCAAACCGATGCTGCAAGGATTGTGGGATTTGAGGTCAAACCATACAGTGTCAAGCATGAATACGAGGGACAATGGAGTGAGAAGACCCGTTTGACTACCTGTGATCCCCACACTAAGCGACTGGTTGTTAGCTCAGCTACCCCTCAAGAAGTCGAAAATAAGAAAGAAATTATCTTCACATATGATGTTGACTTTCAGGAAAGTGAAGTGAAGTGGGCGTCTAGATGGGATGCTTATCTTTTGATGAGCGACAATCAAATTCACTGGTTTTCTATTGTCAACTCTCTTATGATCGTCCTCTTCCTCTCTGGTATGGTAGCGATGATTATGCTAAGGACCCTTTACCGTGACATTTCACGGTACAACGAGCTTGAGACTCAAGAGGAAGCTCAAGAAGAGACTGGGTGGAAACTCGTCCATGGTGATGTTTTCAGGCCTCCAGCCAATTCAGATCTTCTCTGCGTCTATGTTGGCACAGGTGTCCAGTGTTTAGGCATGGTACTTGTCACTATGATCTTCGCCATGCTCGGATTTTTATCACCTTCCAACCGTGGAGGTCTTATGACAGCCATGCTCCTCCTCTGGGTCTTCATGGGACTCTTTGCCGGTTACGCCTCTTCACGTCTCTACAAAATGTTCAAAGGAACAGAATGGAAGAGAATTGCCTTCAGAACAGCCTTCTTGTTCCCTGCAGTCGTCTCAGCCATCTTCTTTGTCCTAAACGCTCTCATCTGGGGACAAAAATCATCCGGAGCTGTTCCCTTTGGAACAATGTTTGCTCTGATCTTCCTCTGGTTTGGAATCTCGGTCCCTCTTGTCTTTGTCGGCGCTTACCTCGGATTCAAGAAGCCACCGCTCGATGACCCCGTGAAAACCAACAAAATCCCACGTCAAATCCCGGAGCAAGCTTGGTACATGAACCCAATTTTCTCAATCCTCATTGGAGGAATCTTACCGTTCGGTGCAGTCTTCATCGAGCTCTTCTTCATCCTCACATCCATCTGGCTCAACCAGTTCTACTACATCTTCGGTTTCCTCTTCCTCGTCTTTGTGATCCTTATGGTCACCTGCGCCGAGATCACCATTGTTCTCTGCTACTTCCAGCTTTGCAGTGAAGACTATCTCTGGTGGTGGAGGTCTTACCTCACCTCAGGCTCTTCTGCGGTCTATCTCTTCCTCTACGCAGCCTTCTATTTCTTCACAAAGCTCCAGATCACTAAGCTCGTCTCAGCTATGCTCTACTTTGGATACATGCTCATCGCCTCTTACGCGTTTTTCGTGCTGACCGGAACAATCGGGTTCTACGCTTGTCTCTGGTTCACAAGACTCATCTATTCCTCGGTAAAGATCGATTGATTCAGAAAAACATTCAAGAGAAGTACGAAAGAAAGAAGGAAGGTAATATAGTTAATGATTTTCACAAGTTTGTTTTTGCTCAATAGGGGTCTCTTCTTGTTTCGCTCTGGTTTTGGTTTACAAGTAACAAAAGAAAAGGTTTTATATGTAAACCTTTTCTTTTTTTAGAGTGTATTCTGTTTGATTTTCCCAAATGTCACTTTGGATTATCTTCCTTAATTGACAATTATGTGATTCTTTCATTTCTATTTATATTTTTATACTCTCTTGTAAACTTTACTTTAGCATTTTCTTGATTACATCAAATTCTAAGCACTCTCTTCCCGTTAATTGCGTTTTGCGGACATCAATAAATT
CDS Sequence
Protein Sequence