Information report for AT5G24870
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0048767 — acts upstream of or within — root hair elongation
- GO:0005634 — located in — nucleus
- GO:1901575 — acts upstream of or within — organic substance catabolic process
- GO:0044248 — acts upstream of or within — cellular catabolic process
- GO:0009266 — acts upstream of or within — response to temperature stimulus
- GO:0061630 — enables — ubiquitin protein ligase activity
- GO:0019538 — acts upstream of or within — protein metabolic process
- SALK_015310 — Increased water loss rate; more sensitive to drought stress; lower leaf temperatures; stomatal closure was less sensitive to ABA treatment; disruption of microtubules with oryzalin partially restored stomatal closure under ABA treatment.
- SALK_020143 — Increased water loss rate; more sensitive to drought stress; lower leaf temperatures; stomatal closure was less sensitive to ABA treatment; disruption of microtubules with oryzalin partially restored stomatal closure under ABA treatment.
Functional Keywords
Literature and News
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- When defense pathways collide. The response of Arabidopsis to a combination of drought and heat stress. DOI: 10.1104/pp.103.033431 ; PMID: 15047901
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
- The E3 ligase MREL57 modulates microtubule stability and stomatal closure in response to ABA. DOI: 10.1038/s41467-021-22455-y ; PMID: 33846350
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Gene Resources
- UniProt: Q8L775
- EMBL: AY136427, BT014966, CP002688
- AlphaFoldDB: Q8L775
- EnsemblPlants: AT5G24870.1, AT5G24870.2, AT5G24870.3
- Gramene: AT5G24870.1, AT5G24870.2, AT5G24870.3
- KEGG: ath:AT5G24870
- Orthologous matrix: LVLHENM
- ExpressionAtlas: AT5G24870
- InterPro: IPR001841, IPR013083, IPR045191
- PANTHER: PTHR22937, PTHR22937:SF136
- SUPFAM: SSF57850
- PROSITE: PS50089
- Gene3D: 3.30.40.10
- SWISS-MODEL: Q8L775
Sequences
cDNA Sequence
- >AT5G24870.2
ACATATCATTCCGCGATAACTAGCAACGGTGCCGTTTCAATAACCTCTCTCATGTCCTTTCGTAACTCAACGAAACCCAAAATCAACGGCTCAGATCATTCCGACTTCTGTTTCGCCTTTGCTACGCCACTTCTTCTTCTTCTTCTCCGGTTTTAAATTAAAACCTCTCACAAAATTATTCGGAATATTATTTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCGCATCTCTCTCACTTCACGTTTTCTTCGGTGAAGAGATAGCCGCCGGAAAAAGTTATCATCTCCGGAAATTTCGCTCTTTCTTTACGGTAATTACGAGAAAAACAAAATCCAAAAATCGTTTTTTTCTATTTGATGATTTTGCCTTCGTATTCAATATTGTAAAGTTTTGTTTTTTCCGTTGTTTAATTACGTAAATTCGATAAAAGTTTCTTCCTTTAGATTGAATTTTTCTGTTTCTATGGCTTGAGAACTAGTTTCGTGTGGTTGTTTCTTCTGATTCTTGAATTTGATTGAGAAAGTTTATATCTTTGGTTAAGAGTTTTTTTGTTTGTGTACGTTTTAAAATCCATGGAGAAGCTTGAATCACGGAGAAGACTAGTCGTATTAATGGAAACTCCGTGTAAATCGAATGAGCTTCTTCTTTTGGATGGTTCTTCTTCTCTTTAGCTTTCCTCTTTTCTCTCTTTTTGGTTTCTTTAACAATCTCTGACTTATAGCTTTTGAAGCCTCTGTTTGTTTATGGTTATATCCTCTCTGTTCTTCTCATTTCTAAAGACTGAATTTTGAATGTGTTTGAGGGTGTGTTTTATGTATGGATGGATTTAAGGGTAAAAGAACATCTAGACCGATTATGCCACGGAAAGCAAGTGGTCTTGTGTTACATGAGAATATGAAGAAGAAAGATGATAAGAGTGTTGTCCCTATCTGCAGTAGAATTGGTTGCAGTTCCAGGGTTAGTTCCACTAAGGGAGATTTGATTGATCATAAAGCAAAAGCTACTGTGTCTTCGTTTCGATCTCCTTTGAGTGGAAAGGAAACCGTTGGTAGTTCATCTCGAAGTATGAGTGGATTTGGTGGTACAAAAAAGGCTTCCAAGGTTATTGGTAGGAGACAACTCTCTTCTCTTTTGGACATGGATTCTTCAGAGAGCAGCAGTGTTAATGAAGACTCACCCACAAGTGAGCGTTCCCTTCCTCGTGGAAAGACAAAAGAAAGCACTATTAGTGTTCATTCTGAAAGTAGTGTCTCTGGAGAAGTTGTGACAGAGGCAGGAAGCTCGAGTAGAGGAACTGGTAGAAGCATTCATCAGAGACCTGATTTGGTCTCCCGAGATGCTCGTGTGAGTAATAGTGAGCAAAATGCAAGAGCTAGTGTGAACAAGAATGGATTAAGAGACTTGAGGAACAAATCTGGTTCTGATGTTCTTCCATCTAATTCAACTCCGACAAGAAAAAGTAACATCTTTAGAAAGAAAACCTCTGATGGTGAGAGCAGCTCTTCGAGTAGAGGGAATAAGACGGAAGGATCAGTGGTTGGGGGAAAGAATATTAGTTCCCCTCAGGGGAATGGCATCACCATGTCTGAACCTAGGAGGAACAGAAACTTACCAAGTGTTAGGGACAACAGTGTTGTTTCAAGTAGTACTAGGAGATCAACTGGTTATTATGGTAGAACAGGACGTGCTGGAGCGGTTGCAACACTACAAGCACCTCGGCCTCCAACAAGAGCTGATCTCAATCCTTCTAGATCGGCAGAAGCTTCGCGTAGTCCTTTAAATAGTTACAGTAGGCCAATCAGTAGTAATGGCAGGTTACGTAGCCTGATGATGCCTGGTAGCCCCTCAGAAGCCGGCCTTTCTCGCTCTTTGATGAACCGTGATACTTTCAGACGGTATAACATGAATGGAGTTGCAGAGGTATTGTTGGCCCTGGAAAGGATTGAGCAAGACGAAGAGCTTACATACGAGCAATTGGCTGTTTTAGAGACCAATCTGTTCTTAAATGGTATGAGCAGCTTCCACGATCAGCATAGAGATATGAGGCTTGACATTGACAACATGTCGTATGAGGAACTGTTAGCATTAGAGGAGAAAATGGGTACAGTGAGCACTGCTCTAAGCGAAGAAGCGCTTCTGAAAAGCCTCAAGTCAAGTATTTACCGTCCAAACGATGAATCCGACGACATTTGCCTGAACAAAGATGATGATGTCAAGTGCAGCATTTGCCAGGAAGAGTATGTTGATGGAGATGAAGTAGGGACTTTGCCTTGCCAACATAAATACCACGTGAGCTGCGCGCAACAATGGCTACGGATGAAGAATTGGTGTCCTATATGTAAAACCTCTGCAGAATCTCAGCCACATCCATTTTCATGATGATGGGATTGCAGAGACATTTACCAAAGTGTTTGTGTCTACTTCCACTACCTTGCTCTCTATTATTTGTACATAAAAGGTTTTCTTTTTTACTTACACACAATTGGGAACAAATAGAAAATAAGATCAGGTGGACAAATTATTGTTTTCACCTTGTATTGGTTCGTAATTTCAACAATATTTGGTTTAATTCCATATATAGTTTATATACTGTTATTGCACTCTTCATGTTCTTCCACATTCGGCTCCGGTTAAAGGAAATTATATATAGAATCAGCCATTGTTCAGCAAGTTTGTGTTTCTAGCAACCACAATATTCAAAAGTC - >AT5G24870.1
ACATATCATTCCGCGATAACTAGCAACGGTGCCGTTTCAATAACCTCTCTCATGTCCTTTCGTAACTCAACGAAACCCAAAATCAACGGCTCAGATCATTCCGACTTCTGTTTCGCCTTTGCTACGCCACTTCTTCTTCTTCTTCTCCGGTTTTAAATTAAAACCTCTCACAAAATTATTCGGAATATTATTTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCGCATCTCTCTCACTTCACGTTTTCTTCGGTGAAGAGATAGCCGCCGGAAAAAGTTATCATCTCCGGAAATTTCGCTCTTTCTTTACGGTAATTACGAGAAAAACAAAATCCAAAAATCGTTTTTTTCTATTTGATGATTTTGCCTTCGTATTCAATATTGTAAAGTTTTGTTTTTTCCGTTGTTTAATTACGTAAATTCGATAAAAGTTTCTTCCTTTAGATTGAATTTTTCTGTTTCTATGGCTTGAGAACTAGTTTCGTGTGGTTGTTTCTTCTGATTCTTGAATTTGATTGAGAAAGTTTATATCTTTGGTTAAGAGTTTTTTTGTTTGTGTACGTTTTAAAATCCATGGAGAAGCTTGAATCACGGAGAAGACTAGTCGTATTAATGGAAACTCCGTGTAAATCGAATGAGCTTCTTCTTTTGGATGGTTCTTCTTCTCTTTAGCTTTCCTCTTTTCTCTCTTTTTGGTTTCTTTAACAATCTCTGACTTATAGCTTTTGAAGCCTCTGTTTGTTTATGGTTATATCCTCTCTGTTCTTCTCATTTCTAAAGACTGAATTTTGAATGTGTTTGAGGGTGTGTTTTATGTATGGATGGATTTAAGGGTAAAAGAACATCTAGACCGATTATGCCACGGAAAGCAAGTGGTCTTGTGTTACATGAGAATATGAAGAAGAAAGATGATAAGAGTGTTGTCCCTATCTGCAGTAGAATTGGTTGCAGTTCCAGGGTTAGTTCCACTAAGGGAGATTTGATTGATCATAAAGCAAAAGCTACTGTGTCTTCGTTTCGATCTCCTTTGAGTGGAAAGGAAACCGTTGGTAGTTCATCTCGAAGTATGAGTGGATTTGGTGGTACAAAAAAGGCTTCCAAGGTTATTGGTAGGAGACAACTCTCTTCTCTTTTGGACATGGATTCTTCAGAGAGCAGCAGTGTTAATGAAGACTCACCCACAAGTGAGCGTTCCCTTCCTCGTGGAAAGACAAAAGAAAGCACTATTAGTGTTCATTCTGAAAGTAGTGTCTCTGGAGAAGTTGTGACAGAGGCAGGAAGCTCGAGTAGAGGAACTGGTAGAAGCATTCATCAGAGACCTGATTTGGTCTCCCGAGATGCTCGTGTGAGTAATAGTGAGCAAAATGCAAGAGCTAGTGTGAACAAGAATGGATTAAGAGACTTGAGGAACAAATCTGGTTCTGATGTTCTTCCATCTAATTCAACTCCGACAAGAAAAAGTAACATCTTTAGAAAGAAAACCTCTGATGGTGAGAGCAGCTCTTCGAGTAGAGGGAATAAGACGGAAGGATCAGTGGTTGGGGGAAAGAATATTAGTTCCCCTCAGGGGAATGGCATCACCATGTCTGAACCTAGGAGGAACAGAAACTTACCAAGTGTTAGGGACAACAGTGTTGTTTCAAGTAGTACTAGGAGATCAACTGGTTATTATGGTAGAACAGGACGTGCTGGAGCGGTTGCAACACTACAAGCACCTCGGCCTCCAACAAGAGCTGATCTCAATCCTTCTAGATCGGCAGAAGCTTCGCGTAGTCCTTTAAATAGTTACAGTAGGCCAATCAGTAGTAATGGCAGGTTACGTAGCCTGATGATGCCTGGTAGCCCCTCAGAAGCCGGCCTTTCTCGCTCTTTGATGAACCGTGATACTTTCAGACGGTATAACATGAATGGAGTTGCAGAGGTATTGTTGGCCCTGGAAAGGATTGAGCAAGACGAAGAGCTTACATACGAGCAATTGGCTGTTTTAGAGACCAATCTGTTCTTAAATGGTATGAGCAGCTTCCACGATCAGCATAGAGATATGAGGCTTGACATTGACAACATGTCGTATGAGGAACTGTTAGCATTAGAGGAGAAAATGGGTACAGTGAGCACTGCTCTAAGCGAAGAAGCGCTTCTGAAAAGCCTCAAGTCAAGTATTTACCGTCCAAACGATGAATCCGACGACATTTGCCTGAACAAAGATGATGATGTCAAGTGCAGCATTTGCCAGGAAGAGTATGTTGATGGAGATGAAGTAGGGACTTTGCCTTGCCAACATAAATACCACGTGAGCTGCGCGCAACAATGGCTACGGATGAAGAATTGGTGTCCTATATGTAAAACCTCTGCAGAATCTCAGCCACATCCATTTTCATGATGATGGGATTGCAGAGACATTTACCAAAGTGTTTGTGTCTACTTCCACTACCTTGCTCTCTATTATTTGTACATAAAAGGTTTTCTTTTTTACTTACACACAATTGGGAACAAATAGAAAATAAGATCAGGTGGACAAATTATTGTTTTCACCTTGTATTGGTTCGTAATTTCAACAATATTTGGTTTAATTCCATATATAGTTTATATACTGTTATTGCACTCTTCATGTTCTTCCACATTCGGCTCCGGTTAAAGGAAATTATATATAGAATCAGCCATTGTTCAGCAAGTTTGTGTTTCTAGCAACCACAATATTCAAAAGTC - >AT5G24870.3
ACATATCATTCCGCGATAACTAGCAACGGTGCCGTTTCAATAACCTCTCTCATGTCCTTTCGTAACTCAACGAAACCCAAAATCAACGGCTCAGATCATTCCGACTTCTGTTTCGCCTTTGCTACGCCACTTCTTCTTCTTCTTCTCCGGTTTTAAATTAAAACCTCTCACAAAATTATTCGGAATATTATTTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCGCATCTCTCTCACTTCACGTTTTCTTCGGTGAAGAGATAGCCGCCGGAAAAAGTTATCATCTCCGGAAATTTCGCTCTTTCTTTACGGTAATTACGAGAAAAACAAAATCCAAAAATCGTTTTTTTCTATTTGATGATTTTGCCTTCGTATTCAATATTGTAAAGTTTTGTTTTTTCCGTTGTTTAATTACGTAAATTCGATAAAAGTTTCTTCCTTTAGATTGAATTTTTCTGTTTCTATGGCTTGAGAACTAGTTTCGTGTGGTTGTTTCTTCTGATTCTTGAATTTGATTGAGAAAGTTTATATCTTTGGTTAAGAGTTTTTTTGTTTGTGTACGTTTTAAAATCCATGGAGAAGCTTGAATCACGGAGAAGACTAGTCGTATTAATGGAAACTCCGTGTAAATCGAATGAGCTTCTTCTTTTGGATGGTTCTTCTTCTCTTTAGCTTTCCTCTTTTCTCTCTTTTTGGTTTCTTTAACAATCTCTGACTTATAGCTTTTGAAGCCTCTGTTTGTTTATGGTTATATCCTCTCTGTTCTTCTCATTTCTAAAGACTGAATTTTGAATGTGTTTGAGGGTGTGTTTTATGTATGGATGGATTTAAGGGTAAAAGAACATCTAGACCGATTATGCCACGGAAAGCAAGTGGTCTTGTGTTACATGAGAATATGAAGAAGAAAGATGATAAGAGTGTTGTCCCTATCTGCAGTAGAATTGGTTGCAGTTCCAGGGTTAGTTCCACTAAGGGAGATTTGATTGATCATAAAGCAAAAGCTACTGTGTCTTCGTTTCGATCTCCTTTGAGTGGAAAGGAAACCGTTGGTAGTTCATCTCGAAGTATGAGTGGATTTGGTGGTACAAAAAAGGCTTCCAAGGTTATTGGTAGGAGACAACTCTCTTCTCTTTTGGACATGGATTCTTCAGAGAGCAGCAGTGTTAATGAAGACTCACCCACAAGTGAGCGTTCCCTTCCTCGTGGAAAGACAAAAGAAAGCACTATTAGTGTTCATTCTGAAAGTAGTGTCTCTGGAGAAGTTGTGACAGAGGCAGGAAGCTCGAGTAGAGGAACTGGTAGAAGCATTCATCAGAGACCTGATTTGGTCTCCCGAGATGCTCGTGTGAGTAATAGTGAGCAAAATGCAAGAGCTAGTGTGAACAAGAATGGATTAAGAGACTTGAGGAACAAATCTGGTTCTGATGTTCTTCCATCTAATTCAACTCCGACAAGAAAAAGTAACATCTTTAGAAAGAAAACCTCTGATGGTGAGAGCAGCTCTTCGAGTAGAGGGAATAAGACGGAAGGATCAGTGGTTGGGGGAAAGAATATTAGTTCCCCTCAGGGGAATGGCATCACCATGTCTGAACCTAGGAGGAACAGAAACTTACCAAGTGTTAGGGACAACAGTGTTGTTTCAAGTAGTACTAGGAGATCAACTGGTTATTATGGTAGAACAGGACGTGCTGGAGCGGTTGCAACACTACAAGCACCTCGGCCTCCAACAAGAGCTGATCTCAATCCTTCTAGATCGGCAGAAGCTTCGCGTAGTCCTTTAAATAGTTACAGTAGGCCAATCAGTAGTAATGGCAGGTTACGTAGCCTGATGATGCCTGGTAGCCCCTCAGAAGCCGGCCTTTCTCGCTCTTTGATGAACCGTGATACTTTCAGACGGTATAACATGAATGGAGTTGCAGAGGTATTGTTGGCCCTGGAAAGGATTGAGCAAGACGAAGAGCTTACATACGAGCAATTGGCTGTTTTAGAGACCAATCTGTTCTTAAATGGTATGAGCAGCTTCCACGATCAGCATAGAGATATGAGGCTTGACATTGACAACATGTCGTATGAGGAACTGTTAGCATTAGAGGAGAAAATGGGTACAGTGAGCACTGCTCTAAGCGAAGAAGCGCTTCTGAAAAGCCTCAAGTCAAGTATTTACCGTCCAAACGATGAATCCGACGACATTTGCCTGAACAAAGATGATGATGTCAAGTGCAGCATTTGCCAGGAAGAGTATGTTGATGGAGATGAAGTAGGGACTTTGCCTTGCCAACATAAATACCACGTGAGCTGCGCGCAACAATGGCTACGGATGAAGAATTGGTGTCCTATATGTAAAACCTCTGCAGAATCTCAGCCACATCCATTTTCATGATGATGGGATTGCAGAGACATTTACCAAAGTGTTTGTGTCTACTTCCACTACCTTGCTCTCTATTATTTGTACATAAAAGGTTTTCTTTTTTACTTACACACAATTGGGAACAAATAGAAAATAAGATCAGGTGGACAAATTATTGTTTTCACCTTGTATTGGTTCGTAATTTCAACAATATTTGGTTTAATTCCATATATAGTTTATATACTGTTATTGCACTCTTCATGTTCTTCCACATTCGGCTCCGGTTAAAGGAAATTATATATAGAATCAGCCATTGTTCAGCAAGTTTGTGTTTCTAGCAACCACAATATTCAAAAGTC
CDS Sequence
Protein Sequence