Gene Details:
- Gene ID: AT5G24670
- Gene Symbol: AtTAD3, EMB2820, TAD3
- Gene Name: EMBRYO DEFECTIVE 2820, tRNA adenosine deaminase 3
- Description: Cytidine/deoxycytidylate deaminase family protein;(source:Araport11)
- TAIR Accession: locus:2176816
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0005737 — located in — cytoplasm
- GO:0052717 — contributes to — tRNA-specific adenosine-34 deaminase activity
- GO:0005515 — enables — protein binding
- GO:0005737 — is active in — cytoplasm
- GO:0005634 — located in — nucleus
- GO:0008251 — enables — tRNA-specific adenosine deaminase activity
- GO:0006400 — involved in — tRNA modification
- GO:0003824 — enables — catalytic activity
- GO:0005634 — is active in — nucleus
Germplasm Phenotype:
- tad3 — partial seed abortion, with embryos arresting before the globular stage
Function-related keywords:
Literature:
- Two RNA subunits and POT1a are components of Arabidopsis telomerase. DOI: 10.1073/pnas.1013021107 ; PMID: 21164032
- Molecular foundations of reproductive lethality in Arabidopsis thaliana. DOI: 10.1371/journal.pone.0028398 ; PMID: 22164284
- Identification of enzymes for adenosine-to-inosine editing and discovery of cytidine-to-uridine editing in nucleus-encoded transfer RNAs of Arabidopsis. DOI: 10.1104/pp.114.250498 ; PMID: 25315605
- An Arabidopsis Natural Epiallele Maintained by a Feed-Forward Silencing Loop between Histone and DNA. DOI: 10.1371/journal.pgen.1006551 ; PMID: 28060933
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
Sequences:
cDNA Sequence
- >AT5G24670.2
ACCTCAAGTACTTAGCTAGAATAAGCTACTTCTACGAATGGGCCACAACAAAACATACTTCACCACTTTGGGCCTACACAACTTCATCAGCCCAATAAGATAAAACATAAAACCCACTTCTCTTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCACGTCTCTCTCTTACGTCGTCTTCTTCTTCTAGTTTCCAATCTTCTTGTTCTTCATCATTGTTGTTTCCTTCTCACTGATGTTCTTCTTCTTCTTTGCAGGATCAATCGGAGAGTTCAATCTCAACAGACGACCATACCCTCGATACAGTAGCTGCTCCGCTCATCAACGTCCATTTCGCCGCCTTTAGCCGTCAACGTTCTCTGGTTCTGTTGCCGTACAAAATTCTTAAAGGTTAATTAGATAAGACCTAAAACGGCGACGTGTAAGCTGTCGTCTTCTTGACCTTTTTGGTGAACTCCTCCTTCCTCTCTATCGGCTATCGCTCGCTGCGTCTCTGTGTCTTGTTGCTTGGAGCAAGCTCTCCAGCGCTCAAGAATAGATAAAATAAAATTATGGATTCAGATGCATGGGAAATTATCCATATACCTGAAAAGCCTTCATTGTCACCTGACCATCAGCCCACTGTGAAGGTATATGCTAGCCTAATCAAACCCAGATTTGCCAATACGATAGTGAGGCATTTATGTAAGATTGCTCCTCTAGAAGATCTTCGTCATGTTAAAAGGGTGAAGAAGAAGATTCTGCCAGATTGCGCTTATTGGACAGGTGAAACTCAGTTGACTGTCATCTTATGTCTAGCACCTGAGCACAACGATCAGTTGAGTGACATGCCACCTGATGTGCAGAGACTCGTTGATCCCTATGAGTTGAGTCCTTTTATTACACAAGTATGCAAATATGCTGCGGTATCCAAAGAAGAGTGGGAAGAACAAAGTAAGATATGGCCTACTTCATTTCATCCACCAACCTACAATATAGATGGCATCGGTGGGTTCAGCGAGGAGGAAACACAATCAATCTGCAAGTTCATGAGAGTTGTTATTGATATGGCAGTATCTGGTCATACACCACTTGTGAATGCTGCAGTGATAGTTGATCCTTCAGTTAGGCGAATAATAGCTAGTGAAACTGATCAAGTATATGCATCATCTGCTCCTCGTGACATGACTAGCGCAGAGACCAGGCCCTTCGAGGAAACAGGGGAAATATGTTTAAATGACACACTTGAAAAACAGAATGGTTCATTGTCTGCTCTTTCTTGTCTGAATCCCTGGCAATGGAGTTTGCAGCCGCATGACACTGAAAATTGTAGCCAGTGGCATCCTCTTAGGCATGCTTCCATGGTTGCCATTGAATCCTCTTCTGCCAGAGATAGAAATCTGTTTCCCAATCCATCCAAGATTTTTGATCAGGATCATGTTCCGCCCTCAAATACAGATTCTCCGGCTAAAAAGCAGAAAACAAGCAGTCAGAGTCCAGACGTCCAAAATGACAGCAGAGAAGAGACTGTTAGAGATCCTTCAATGGAAAGGCCGTACCTCTGCACTGGTTATGACATTTTCCTCCTGTTGGAGCCTTGTACAATGTGTGCTATGGCGCTTGTGCATCAAAGAATAAAACGGATTTTCTATGCTTTTCCAAACACCACGGCAGGTGGTCTCGGGAGTGTTCATAGACTTCAAGGGGAAAAGAGTTTGAACCATCATTATGCAGTGTTTAGAGTTTTGCTGCCTGATGACGCACTTAGACAAATGACCACGGTCTAATGCATTGTTGTAGTCGATTGATAATCAGGTTCTGGTATCAGGTCATTGCATGGCCCAACTGAAATCATTCTTGCACTGCGCTCTCTTAATCTAACAACAGAGGATTGACGATTGCCGCCATTCGAAAATCGTCATTAGCTGAAAGACGAAAGAGGTTGTTATGAGGTAAATGGTGATAATCTCAAACTTGGTTTTCAAAGTTATAAGCTCATCTGATCGCGCAACACGTGTATATTTGTATGTATTAGATTTTGATAGGTGAAAAAAAAATTATGTAACAATAAAAAGTCTAGATTAAGACCTGTGTATGAG - >AT5G24670.5
ACCTCAAGTACTTAGCTAGAATAAGCTACTTCTACGAATGGGCCACAACAAAACATACTTCACCACTTTGGGCCTACACAACTTCATCAGCCCAATAAGATAAAACATAAAACCCACTTCTCTTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCACGTCTCTCTCTTACGTCGTCTTCTTCTTCTAGTTTCCAATCTTCTTGTTCTTCATCATTGTTGTTTCCTTCTCACTGATGTTCTTCTTCTTCTTTGCAGGATCAATCGGAGAGTTCAATCTCAACAGACGACCATACCCTCGATACAGTAGCTGCTCCGCTCATCAACGTCCATTTCGCCGCCTTTAGCCGTCAACGTTCTCTGGTTCTGTTGCCGTACAAAATTCTTAAAGGTTAATTAGATAAGACCTAAAACGGCGACGTGTAAGCTGTCGTCTTCTTGACCTTTTTGGTGAACTCCTCCTTCCTCTCTATCGGCTATCGCTCGCTGCGTCTCTGTGTCTTGTTGCTTGGAGCAAGCTCTCCAGCGCTCAAGAATAGATAAAATAAAATTATGGATTCAGATGCATGGGAAATTATCCATATACCTGAAAAGCCTTCATTGTCACCTGACCATCAGCCCACTGTGAAGGTATATGCTAGCCTAATCAAACCCAGATTTGCCAATACGATAGTGAGGCATTTATGTAAGATTGCTCCTCTAGAAGATCTTCGTCATGTTAAAAGGGTGAAGAAGAAGATTCTGCCAGATTGCGCTTATTGGACAGGTGAAACTCAGTTGACTGTCATCTTATGTCTAGCACCTGAGCACAACGATCAGTTGAGTGACATGCCACCTGATGTGCAGAGACTCGTTGATCCCTATGAGTTGAGTCCTTTTATTACACAAGTATGCAAATATGCTGCGGTATCCAAAGAAGAGTGGGAAGAACAAAGTAAGATATGGCCTACTTCATTTCATCCACCAACCTACAATATAGATGGCATCGGTGGGTTCAGCGAGGAGGAAACACAATCAATCTGCAAGTTCATGAGAGTTGTTATTGATATGGCAGTATCTGGTCATACACCACTTGTGAATGCTGCAGTGATAGTTGATCCTTCAGTTAGGCGAATAATAGCTAGTGAAACTGATCAAGTATATGCATCATCTGCTCCTCGTGACATGACTAGCGCAGAGACCAGGCCCTTCGAGGAAACAGGGGAAATATGTTTAAATGACACACTTGAAAAACAGAATGGTTCATTGTCTGCTCTTTCTTGTCTGAATCCCTGGCAATGGAGTTTGCAGCCGCATGACACTGAAAATTGTAGCCAGTGGCATCCTCTTAGGCATGCTTCCATGGTTGCCATTGAATCCTCTTCTGCCAGAGATAGAAATCTGTTTCCCAATCCATCCAAGATTTTTGATCAGGATCATGTTCCGCCCTCAAATACAGATTCTCCGGCTAAAAAGCAGAAAACAAGCAGTCAGAGTCCAGACGTCCAAAATGACAGCAGAGAAGAGACTGTTAGAGATCCTTCAATGGAAAGGCCGTACCTCTGCACTGGTTATGACATTTTCCTCCTGTTGGAGCCTTGTACAATGTGTGCTATGGCGCTTGTGCATCAAAGAATAAAACGGATTTTCTATGCTTTTCCAAACACCACGGCAGGTGGTCTCGGGAGTGTTCATAGACTTCAAGGGGAAAAGAGTTTGAACCATCATTATGCAGTGTTTAGAGTTTTGCTGCCTGATGACGCACTTAGACAAATGACCACGGTCTAATGCATTGTTGTAGTCGATTGATAATCAGGTTCTGGTATCAGGTCATTGCATGGCCCAACTGAAATCATTCTTGCACTGCGCTCTCTTAATCTAACAACAGAGGATTGACGATTGCCGCCATTCGAAAATCGTCATTAGCTGAAAGACGAAAGAGGTTGTTATGAGGTAAATGGTGATAATCTCAAACTTGGTTTTCAAAGTTATAAGCTCATCTGATCGCGCAACACGTGTATATTTGTATGTATTAGATTTTGATAGGTGAAAAAAAAATTATGTAACAATAAAAAGTCTAGATTAAGACCTGTGTATGAG - >AT5G24670.4
ACCTCAAGTACTTAGCTAGAATAAGCTACTTCTACGAATGGGCCACAACAAAACATACTTCACCACTTTGGGCCTACACAACTTCATCAGCCCAATAAGATAAAACATAAAACCCACTTCTCTTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCACGTCTCTCTCTTACGTCGTCTTCTTCTTCTAGTTTCCAATCTTCTTGTTCTTCATCATTGTTGTTTCCTTCTCACTGATGTTCTTCTTCTTCTTTGCAGGATCAATCGGAGAGTTCAATCTCAACAGACGACCATACCCTCGATACAGTAGCTGCTCCGCTCATCAACGTCCATTTCGCCGCCTTTAGCCGTCAACGTTCTCTGGTTCTGTTGCCGTACAAAATTCTTAAAGGTTAATTAGATAAGACCTAAAACGGCGACGTGTAAGCTGTCGTCTTCTTGACCTTTTTGGTGAACTCCTCCTTCCTCTCTATCGGCTATCGCTCGCTGCGTCTCTGTGTCTTGTTGCTTGGAGCAAGCTCTCCAGCGCTCAAGAATAGATAAAATAAAATTATGGATTCAGATGCATGGGAAATTATCCATATACCTGAAAAGCCTTCATTGTCACCTGACCATCAGCCCACTGTGAAGGTATATGCTAGCCTAATCAAACCCAGATTTGCCAATACGATAGTGAGGCATTTATGTAAGATTGCTCCTCTAGAAGATCTTCGTCATGTTAAAAGGGTGAAGAAGAAGATTCTGCCAGATTGCGCTTATTGGACAGGTGAAACTCAGTTGACTGTCATCTTATGTCTAGCACCTGAGCACAACGATCAGTTGAGTGACATGCCACCTGATGTGCAGAGACTCGTTGATCCCTATGAGTTGAGTCCTTTTATTACACAAGTATGCAAATATGCTGCGGTATCCAAAGAAGAGTGGGAAGAACAAAGTAAGATATGGCCTACTTCATTTCATCCACCAACCTACAATATAGATGGCATCGGTGGGTTCAGCGAGGAGGAAACACAATCAATCTGCAAGTTCATGAGAGTTGTTATTGATATGGCAGTATCTGGTCATACACCACTTGTGAATGCTGCAGTGATAGTTGATCCTTCAGTTAGGCGAATAATAGCTAGTGAAACTGATCAAGTATATGCATCATCTGCTCCTCGTGACATGACTAGCGCAGAGACCAGGCCCTTCGAGGAAACAGGGGAAATATGTTTAAATGACACACTTGAAAAACAGAATGGTTCATTGTCTGCTCTTTCTTGTCTGAATCCCTGGCAATGGAGTTTGCAGCCGCATGACACTGAAAATTGTAGCCAGTGGCATCCTCTTAGGCATGCTTCCATGGTTGCCATTGAATCCTCTTCTGCCAGAGATAGAAATCTGTTTCCCAATCCATCCAAGATTTTTGATCAGGATCATGTTCCGCCCTCAAATACAGATTCTCCGGCTAAAAAGCAGAAAACAAGCAGTCAGAGTCCAGACGTCCAAAATGACAGCAGAGAAGAGACTGTTAGAGATCCTTCAATGGAAAGGCCGTACCTCTGCACTGGTTATGACATTTTCCTCCTGTTGGAGCCTTGTACAATGTGTGCTATGGCGCTTGTGCATCAAAGAATAAAACGGATTTTCTATGCTTTTCCAAACACCACGGCAGGTGGTCTCGGGAGTGTTCATAGACTTCAAGGGGAAAAGAGTTTGAACCATCATTATGCAGTGTTTAGAGTTTTGCTGCCTGATGACGCACTTAGACAAATGACCACGGTCTAATGCATTGTTGTAGTCGATTGATAATCAGGTTCTGGTATCAGGTCATTGCATGGCCCAACTGAAATCATTCTTGCACTGCGCTCTCTTAATCTAACAACAGAGGATTGACGATTGCCGCCATTCGAAAATCGTCATTAGCTGAAAGACGAAAGAGGTTGTTATGAGGTAAATGGTGATAATCTCAAACTTGGTTTTCAAAGTTATAAGCTCATCTGATCGCGCAACACGTGTATATTTGTATGTATTAGATTTTGATAGGTGAAAAAAAAATTATGTAACAATAAAAAGTCTAGATTAAGACCTGTGTATGAG - >AT5G24670.3
ACCTCAAGTACTTAGCTAGAATAAGCTACTTCTACGAATGGGCCACAACAAAACATACTTCACCACTTTGGGCCTACACAACTTCATCAGCCCAATAAGATAAAACATAAAACCCACTTCTCTTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCACGTCTCTCTCTTACGTCGTCTTCTTCTTCTAGTTTCCAATCTTCTTGTTCTTCATCATTGTTGTTTCCTTCTCACTGATGTTCTTCTTCTTCTTTGCAGGATCAATCGGAGAGTTCAATCTCAACAGACGACCATACCCTCGATACAGTAGCTGCTCCGCTCATCAACGTCCATTTCGCCGCCTTTAGCCGTCAACGTTCTCTGGTTCTGTTGCCGTACAAAATTCTTAAAGGTTAATTAGATAAGACCTAAAACGGCGACGTGTAAGCTGTCGTCTTCTTGACCTTTTTGGTGAACTCCTCCTTCCTCTCTATCGGCTATCGCTCGCTGCGTCTCTGTGTCTTGTTGCTTGGAGCAAGCTCTCCAGCGCTCAAGAATAGATAAAATAAAATTATGGATTCAGATGCATGGGAAATTATCCATATACCTGAAAAGCCTTCATTGTCACCTGACCATCAGCCCACTGTGAAGGTATATGCTAGCCTAATCAAACCCAGATTTGCCAATACGATAGTGAGGCATTTATGTAAGATTGCTCCTCTAGAAGATCTTCGTCATGTTAAAAGGGTGAAGAAGAAGATTCTGCCAGATTGCGCTTATTGGACAGGTGAAACTCAGTTGACTGTCATCTTATGTCTAGCACCTGAGCACAACGATCAGTTGAGTGACATGCCACCTGATGTGCAGAGACTCGTTGATCCCTATGAGTTGAGTCCTTTTATTACACAAGTATGCAAATATGCTGCGGTATCCAAAGAAGAGTGGGAAGAACAAAGTAAGATATGGCCTACTTCATTTCATCCACCAACCTACAATATAGATGGCATCGGTGGGTTCAGCGAGGAGGAAACACAATCAATCTGCAAGTTCATGAGAGTTGTTATTGATATGGCAGTATCTGGTCATACACCACTTGTGAATGCTGCAGTGATAGTTGATCCTTCAGTTAGGCGAATAATAGCTAGTGAAACTGATCAAGTATATGCATCATCTGCTCCTCGTGACATGACTAGCGCAGAGACCAGGCCCTTCGAGGAAACAGGGGAAATATGTTTAAATGACACACTTGAAAAACAGAATGGTTCATTGTCTGCTCTTTCTTGTCTGAATCCCTGGCAATGGAGTTTGCAGCCGCATGACACTGAAAATTGTAGCCAGTGGCATCCTCTTAGGCATGCTTCCATGGTTGCCATTGAATCCTCTTCTGCCAGAGATAGAAATCTGTTTCCCAATCCATCCAAGATTTTTGATCAGGATCATGTTCCGCCCTCAAATACAGATTCTCCGGCTAAAAAGCAGAAAACAAGCAGTCAGAGTCCAGACGTCCAAAATGACAGCAGAGAAGAGACTGTTAGAGATCCTTCAATGGAAAGGCCGTACCTCTGCACTGGTTATGACATTTTCCTCCTGTTGGAGCCTTGTACAATGTGTGCTATGGCGCTTGTGCATCAAAGAATAAAACGGATTTTCTATGCTTTTCCAAACACCACGGCAGGTGGTCTCGGGAGTGTTCATAGACTTCAAGGGGAAAAGAGTTTGAACCATCATTATGCAGTGTTTAGAGTTTTGCTGCCTGATGACGCACTTAGACAAATGACCACGGTCTAATGCATTGTTGTAGTCGATTGATAATCAGGTTCTGGTATCAGGTCATTGCATGGCCCAACTGAAATCATTCTTGCACTGCGCTCTCTTAATCTAACAACAGAGGATTGACGATTGCCGCCATTCGAAAATCGTCATTAGCTGAAAGACGAAAGAGGTTGTTATGAGGTAAATGGTGATAATCTCAAACTTGGTTTTCAAAGTTATAAGCTCATCTGATCGCGCAACACGTGTATATTTGTATGTATTAGATTTTGATAGGTGAAAAAAAAATTATGTAACAATAAAAAGTCTAGATTAAGACCTGTGTATGAG - >AT5G24670.1
ACCTCAAGTACTTAGCTAGAATAAGCTACTTCTACGAATGGGCCACAACAAAACATACTTCACCACTTTGGGCCTACACAACTTCATCAGCCCAATAAGATAAAACATAAAACCCACTTCTCTTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCACGTCTCTCTCTTACGTCGTCTTCTTCTTCTAGTTTCCAATCTTCTTGTTCTTCATCATTGTTGTTTCCTTCTCACTGATGTTCTTCTTCTTCTTTGCAGGATCAATCGGAGAGTTCAATCTCAACAGACGACCATACCCTCGATACAGTAGCTGCTCCGCTCATCAACGTCCATTTCGCCGCCTTTAGCCGTCAACGTTCTCTGGTTCTGTTGCCGTACAAAATTCTTAAAGGTTAATTAGATAAGACCTAAAACGGCGACGTGTAAGCTGTCGTCTTCTTGACCTTTTTGGTGAACTCCTCCTTCCTCTCTATCGGCTATCGCTCGCTGCGTCTCTGTGTCTTGTTGCTTGGAGCAAGCTCTCCAGCGCTCAAGAATAGATAAAATAAAATTATGGATTCAGATGCATGGGAAATTATCCATATACCTGAAAAGCCTTCATTGTCACCTGACCATCAGCCCACTGTGAAGGTATATGCTAGCCTAATCAAACCCAGATTTGCCAATACGATAGTGAGGCATTTATGTAAGATTGCTCCTCTAGAAGATCTTCGTCATGTTAAAAGGGTGAAGAAGAAGATTCTGCCAGATTGCGCTTATTGGACAGGTGAAACTCAGTTGACTGTCATCTTATGTCTAGCACCTGAGCACAACGATCAGTTGAGTGACATGCCACCTGATGTGCAGAGACTCGTTGATCCCTATGAGTTGAGTCCTTTTATTACACAAGTATGCAAATATGCTGCGGTATCCAAAGAAGAGTGGGAAGAACAAAGTAAGATATGGCCTACTTCATTTCATCCACCAACCTACAATATAGATGGCATCGGTGGGTTCAGCGAGGAGGAAACACAATCAATCTGCAAGTTCATGAGAGTTGTTATTGATATGGCAGTATCTGGTCATACACCACTTGTGAATGCTGCAGTGATAGTTGATCCTTCAGTTAGGCGAATAATAGCTAGTGAAACTGATCAAGTATATGCATCATCTGCTCCTCGTGACATGACTAGCGCAGAGACCAGGCCCTTCGAGGAAACAGGGGAAATATGTTTAAATGACACACTTGAAAAACAGAATGGTTCATTGTCTGCTCTTTCTTGTCTGAATCCCTGGCAATGGAGTTTGCAGCCGCATGACACTGAAAATTGTAGCCAGTGGCATCCTCTTAGGCATGCTTCCATGGTTGCCATTGAATCCTCTTCTGCCAGAGATAGAAATCTGTTTCCCAATCCATCCAAGATTTTTGATCAGGATCATGTTCCGCCCTCAAATACAGATTCTCCGGCTAAAAAGCAGAAAACAAGCAGTCAGAGTCCAGACGTCCAAAATGACAGCAGAGAAGAGACTGTTAGAGATCCTTCAATGGAAAGGCCGTACCTCTGCACTGGTTATGACATTTTCCTCCTGTTGGAGCCTTGTACAATGTGTGCTATGGCGCTTGTGCATCAAAGAATAAAACGGATTTTCTATGCTTTTCCAAACACCACGGCAGGTGGTCTCGGGAGTGTTCATAGACTTCAAGGGGAAAAGAGTTTGAACCATCATTATGCAGTGTTTAGAGTTTTGCTGCCTGATGACGCACTTAGACAAATGACCACGGTCTAATGCATTGTTGTAGTCGATTGATAATCAGGTTCTGGTATCAGGTCATTGCATGGCCCAACTGAAATCATTCTTGCACTGCGCTCTCTTAATCTAACAACAGAGGATTGACGATTGCCGCCATTCGAAAATCGTCATTAGCTGAAAGACGAAAGAGGTTGTTATGAGGTAAATGGTGATAATCTCAAACTTGGTTTTCAAAGTTATAAGCTCATCTGATCGCGCAACACGTGTATATTTGTATGTATTAGATTTTGATAGGTGAAAAAAAAATTATGTAACAATAAAAAGTCTAGATTAAGACCTGTGTATGAG
CDS Sequence
Protein Sequence