Information report for AT5G24660
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0005515 — enables — protein binding
- GO:0002229 — involved in — defense response to oomycetes
- GO:0005737 — located in — cytoplasm
- GO:0009651 — involved in — response to salt stress
- GO:0010438 — involved in — cellular response to sulfur starvation
- GO:0047484 — involved in — regulation of response to osmotic stress
- GO:0045893 — acts upstream of or within — positive regulation of DNA-templated transcription
- GO:0042742 — involved in — defense response to bacterium
- GO:0098869 — involved in — cellular oxidant detoxification
- GO:0031347 — acts upstream of or within — regulation of defense response
- GO:0005634 — located in — nucleus
- GO:0009658 — acts upstream of or within — chloroplast organization
- GO:0009507 — located in — chloroplast
- GO:0005739 — located in — mitochondrion
- SALK_031648C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:no change,osmotic stress:increased,salt stress:no change,ABA:no change,hypoxia:ND.
Functional Keywords
Literature and News
- Identification of a novel cis-acting element conferring sulfur deficiency response in Arabidopsis roots. DOI: 10.1111/j.1365-313X.2005.02363.x ; PMID: 15842617
- The zinc-finger protein Zat12 plays a central role in reactive oxygen and abiotic stress signaling in Arabidopsis. DOI: 10.1104/pp.105.068254 ; PMID: 16183833
- Global transcript levels respond to small changes of the carbon status during progressive exhaustion of carbohydrates in Arabidopsis rosettes. DOI: 10.1104/pp.107.115592 ; PMID: 18305208
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- A contribution to identification of novel regulators of plant response to sulfur deficiency: characteristics of a tobacco gene UP9C, its protein product and the effects of UP9C silencing. DOI: 10.1093/mp/ssq007 ; PMID: 20147370
- Independently evolved virulence effectors converge onto hubs in a plant immune system network. DOI: 10.1126/science.1203659 ; PMID: 21798943
- Plastids are major regulators of light signaling in Arabidopsis. DOI: 10.1104/pp.112.193599 ; PMID: 22383539
- Linking genes of unknown function with abiotic stress responses by high-throughput phenotype screening. DOI: 10.1111/ppl.12013 ; PMID: 23517122
- Common and unique Arabidopsis proteins involved in stomatal susceptibility to Salmonella enterica and Pseudomonas syringae. DOI: 10.1093/femsle/fnz197 ; PMID: 31529017
- Active O-acetylserine-(thiol) lyase A and B confer improved selenium resistance and degrade l-Cys and l-SeCys in Arabidopsis. DOI: 10.1093/jxb/erac021 ; PMID: 35084469
- Overexpression of LSU1 and LSU2 confers cadmium tolerance by manipulating sulfur metabolism in Arabidopsis. DOI: 10.1016/j.chemosphere.2023.139046 ; PMID: 37244555
Gene Resources
- UniProt: A0A178UAC4
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A178UAC4
- EnsemblPlants: AT5G24660.1
- Gramene: AT5G24660.1
- KEGG: ath:AT5G24660
- Orthologous matrix: RIIFLMN
- ExpressionAtlas: AT5G24660
- InterPro: IPR039282
- PANTHER: PTHR34283, PTHR34283:SF5
- OrthoDB: A0A178UAC4
- SWISS-MODEL: A0A178UAC4
Sequences
cDNA Sequence
- >AT5G24660.1
CTCGTGTCTCCTCTAAAAACAAATTTGTCTCTAACCAATAAAACAATTATATGGTACCACTAAAATATTCCAAAATATTAATTGGACCCAACGTGTATATCGAAAATAATTTAAAAGAGAAAATGTTCTAGAATCTAGAGGAAGAAAATAACTCACCAGAAATAAGAAAGAAGAAGAAGAGATATAGATACATTGAACCTAGACATAAAACCCACCCAAACCCCAGTCTCAAAGACGCCTATTAATAAGGAACGTTCAAGAACCAAAACAAAACACAAAAAAACTCAAAGTGACCAAAATAACCAAAAGGAGAAATCTTTAGAAAACCTTTAAAAGTTCTTAAAAATGGGGAAAGGAGGAAACTATGTGACGGTGGCGGCTTCCGAAGTGGACGAGCTACGACGGAAGAACGGAGAGATGGAGAAAGCTGTGGAGGAGATGAAGAAAGAGATGTTGCAGTTGTGGCGGCGGACACAGGTGGCGGAAGAAGCGGAGGAGCGTCTCTGCTCACAGCTAGCCGAGCTTGAAGCAGAATCTTTAGACCAGGCTCGTGATTACCACTCTCGTATCATCTTTCTCATGAACGAGCTCTCTCGTCTTTCTTCAGACTCTGCCTCTGCCTCTCCGTAGAATTAGATAGATATTTGCTTTTAAAGAAAGATAGGTTTTTTAGATTGTTTGATGTATCCTCTTATCGGCTCATATCAATGCCAATATGTAGAGTTGTCTTTAAAACAAATATGGAAGTTTCAATCAAAAAAAAAAATCGATGTTGTTACCGATTGATTTTTGCGATTAATGATGAATGAAAAGTCTTGAAAAC
CDS Sequence
Protein Sequence