Information report for AT5G24530
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0042742 — involved in — defense response to bacterium
- GO:0009813 — involved in — flavonoid biosynthetic process
- GO:0071456 — acts upstream of or within — cellular response to hypoxia
- GO:0002229 — involved in — defense response to oomycetes
- GO:0009617 — involved in — response to bacterium
- GO:0009620 — acts upstream of or within — response to fungus
- GO:0005737 — located in — cytoplasm
- GO:0002239 — involved in — response to oomycetes
- GO:0009620 — involved in — response to fungus
- GO:0033759 — enables — flavone synthase activity
- GO:0009813 — acts upstream of or within — flavonoid biosynthetic process
- GO:0046244 — involved in — salicylic acid catabolic process
- GO:0010150 — acts upstream of or within — leaf senescence
- GO:0009617 — acts upstream of or within — response to bacterium
- GO:0009751 — involved in — response to salicylic acid
- GO:0034785 — enables — salicylate 5-hydroxylase activity
- dmr6 eds1-2 — resistant to downy mildew fungus Hyaloperonospora parasitica and showed no hyphal growth. Susceptible to Psuedomonas syringae pv tomato, and to the powdery mildew pathogen, Golovinomyces orontii.
Functional Keywords
Literature and News
- Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02399.x ; PMID: 15860015
- Identification of arabidopsis loci required for susceptibility to the downy mildew pathogen Hyaloperonospora parasitica. DOI: 10.1094/MPMI-18-0583 ; PMID: 15986928
- Detoxification and transcriptome response in Arabidopsis seedlings exposed to the allelochemical benzoxazolin-2(3H)-one. DOI: 10.1074/jbc.M500694200 ; PMID: 15824099
- AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development. DOI: 10.1111/j.1365-313X.2005.02575.x ; PMID: 16359384
- A comprehensive structure-function analysis of Arabidopsis SNI1 defines essential regions and transcriptional repressor activity. DOI: 10.1105/tpc.105.039677 ; PMID: 16766691
- Phosphatidylinositol 4-kinase activation is an early response to salicylic acid in Arabidopsis suspension cells. DOI: 10.1104/pp.107.100842 ; PMID: 17496105
- Transcriptional changes in response to growth of Arabidopsis in high external calcium. DOI: 10.1016/j.febslet.2008.02.043 ; PMID: 18307990
- Arabidopsis sucrose transporter AtSUC1 is important for pollen germination and sucrose-induced anthocyanin accumulation. DOI: 10.1104/pp.108.118992 ; PMID: 18359840
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress. DOI: 10.1105/tpc.19.00463 ; PMID: 31519798
Gene Resources
- UniProt: A0A5S9Y747
- EMBL: CACRSJ010000110, CACSHJ010000096
- AlphaFoldDB: A0A5S9Y747
- EnsemblPlants: AT5G24530.1
- Gramene: AT5G24530.1
- KEGG: ath:AT5G24530
- Orthologous matrix: EHTDYEC
- ExpressionAtlas: AT5G24530
- InterPro: IPR005123, IPR026992, IPR027443
- PANTHER: PTHR47991
- SUPFAM: SSF51197
- PROSITE: PS51471
- Gene3D: 2.60.120.330
- OrthoDB: A0A5S9Y747
- SWISS-MODEL: A0A5S9Y747
Sequences
cDNA Sequence
- >AT5G24530.1
TAAAAATCATTCGAATAATATGCATACTTATATAACAAAAACAATTCACTTGAAAACATAATCAATTGAGAGTAGGACCGAGTAACACTGCATTGTTTTATATATATCATCGATGCACATCGCATACATAATATACTCAAAGTCGAGCCTTCCTTCCTTTATCTCTTATACCCTTTTTGATTCTTCTTCAATTTTCTGACATCAAATGGCGGCAAAGCTGATATCCACCGGTTTCCGTCATACTACTTTGCCGGAAAACTATGTCCGGCCAATCTCCGACCGTCCACGTCTCTCTGAAGTCTCTCAACTCGAAGATTTCCCTCTCATCGATCTCTCTTCCACTGATCGATCTTTTCTCATCCAACAAATCCACCAAGCTTGTGCCCGATTCGGATTTTTTCAGGTCATAAATCACGGAGTTAACAAACAAATAATAGATGAGATGGTGAGTGTTGCGCGTGAGTTCTTTAGCATGTCTATGGAAGAAAAAATGAAGCTATATTCAGACGATCCAACGAAGACAACAAGATTATCGACGAGCTTCAATGTGAAGAAAGAAGAAGTCAACAATTGGAGAGACTATCTAAGACTCCATTGTTATCCTATCCACAAGTATGTCAATGAGTGGCCGTCAAACCCTCCTTCTTTCAAGGAAATAGTAAGTAAATACAGTAGAGAAGTAAGAGAAGTGGGATTTAAAATAGAGGAATTAATATCAGAGAGCTTAGGTTTAGAAAAAGATTACATGAAGAAAGTGCTTGGTGAACAAGGTCAACACATGGCAGTCAACTATTATCCTCCATGTCCTGAACCTGAGCTCACTTACGGTTTACCTGCTCATACCGACCCAAACGCCCTAACCATTCTTCTTCAAGACACTACTGTTTGCGGTCTCCAGATCTTGATCGACGGTCAGTGGTTCGCCGTTAATCCACATCCTGATGCTTTTGTCATCAACATAGGTGACCAGTTACAGGCATTAAGTAATGGAGTATACAAAAGTGTTTGGCATCGCGCTGTAACAAACACAGAAAATCCGAGACTATCGGTCGCATCGTTTCTGTGCCCAGCTGACTGTGCTGTCATGAGCCCGGCCAAGCCCTTGTGGGAAGCTGAGGACGATGAAACGAAACCAGTCTACAAAGATTTCACTTATGCAGAGTATTACAAGAAGTTTTGGAGTAGGAATCTGGACCAAGAACATTGCCTCGAGAATTTTCTAAACAACTAAGATACATATATCTTTGGCCTTTGTGTTTGTCTAGTAGGCATATATATACAAGTCAATAACAGCATTGATGTTCGATTCTACATTCCTACCAACATTTTGTTCTAGACGTATGATAATAGTAGGAATCATGATCATATGTCTTGATAATAACTATCATGGGCATATTTGTTTGTGTGTTAAATAATTTCTTACCTTTTATTTTTCTATATGCTTCAAAACTTTTAACTTTAGAAAATGTTTCGTATTT
CDS Sequence
Protein Sequence