Information report for AT5G24380
Gene Details
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Functional Descriptions
- PO:0005059 — root endodermis — endodermis de la raíz (Spanish, exact), 根内皮 (Japanese, exact)
- PO:0006203 — pericycle — periciclo (Spanish, exact), portion of pericycle tissue (exact), portion of pericyclic tissue (exact), 内鞘 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- SALK_001348 — Morphology and development of mutant plants grown in soil or in standard culture conditions was unaltered. When grown under iron deficiency, mutant plants were comparable to wild type control. The same was observed when plants were grown under zinc, copper and manganese deficiency. The metal content (measured by ICP-MS) was indistinguishable from those present in the wild type plants.
Functional Keywords
Literature and News
- Arabidopsis Yellow Stripe-Like2 (YSL2): a metal-regulated gene encoding a plasma membrane transporter of nicotianamine-metal complexes. DOI: 10.1111/j.1365-313X.2004.02128.x ; PMID: 15255869
- Construction of a genetic linkage map of Thlaspi caerulescens and quantitative trait loci analysis of zinc accumulation. DOI: 10.1111/j.1469-8137.2005.01631.x ; PMID: 16539600
- Quantification of transcription factor expression from Arabidopsis images. DOI: 10.1093/bioinformatics/btl228 ; PMID: 16873489
- Large expression differences in genes for iron and zinc homeostasis, stress response, and lignin biosynthesis distinguish roots of Arabidopsis thaliana and the related metal hyperaccumulator Thlaspi caerulescens. DOI: 10.1104/pp.106.082073 ; PMID: 16998091
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Metal movement within the plant: contribution of nicotianamine and yellow stripe 1-like transporters. DOI: 10.1093/aob/mcn207 ; PMID: 18977764
- Quantitative trait locus mapping for seed mineral concentrations in two Arabidopsis thaliana recombinant inbred populations. DOI: 10.1111/j.1469-8137.2008.02544.x ; PMID: 18631293
- Abscisic acid alleviates iron deficiency by promoting root iron reutilization and transport from root to shoot in Arabidopsis. DOI: 10.1111/pce.12203 ; PMID: 24111973
- Chromate alters root system architecture and activates expression of genes involved in iron homeostasis and signaling in Arabidopsis thaliana. DOI: 10.1007/s11103-014-0210-0 ; PMID: 24928490
- The R2R3-MYB Transcription Factor MYB49 Regulates Cadmium Accumulation. DOI: 10.1104/pp.18.01380 ; PMID: 30782964
- Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. DOI: 10.1074/mcp.T300006-MCP200 ; PMID: 14506206
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Gene Resources
Sequences
cDNA Sequence
- >AT5G24380.1
AATATGCGATTCTCTCTTCTTCTTCTTCTTCTTCCATCTTACGCCAAACCTCGAGTCTGCGAATCATTCGATTCTCAGATTCGCATATTTTCTTCGAATTCGCTAGGCTCAAAACGTTGTTTCCGTGTACAAGAAGCAACCTAACGATTTGGGGCCAGGTGAAGGAAGAGCTGATTTAGGTTATTGAGATTCGTTTTCTTCAAATGGAAAACGAAAGGGTTGAGAGAGAACAGAGCCAATTTCAGGAAGACGAGTTTATCGATTCGAGAAAACCACCGCCATGGAGGAAACAGATCACGGTTCGAGCGATCGTCGCGAGTTTATTGATAGGGATTGTCTACAGTGTGATCTGTCTGAAGCTGAATCTAACGACAGGACTCGTACCGAATCTCAACATCTCATCAGCTCTCTTGGCTTTTGTTTTCCTCAAATCATGGACCAAAGTTCTTCAAAAAGCCGGAATCGCCACGACGCCTTTCACACGTCAAGAGAACACTATTGCTCAAACTTGTGCTGTTGCTTGTTACAGCATCTCTCTTGCAGGTGGATTTGCATCGTATTTGTTGGGTTTGAATAGACGAACTTACGAGGAGACAGGAGTGAACACCGAAGGAAACAATCCTCGTGGTATAAAAGAGCCCGGTGTTGGATGGATGACATCATTCCTCTTCGTTACTAGCTTCATTGGACTTGTTGTATTGGTACCTCTTCGAAAGGTGATGATTATAGACTACAAGCTAACTTATCCTAGTGGAACGGCAACAGCTGTTCTTATAAATGGATTTCATACTAGCAAAGGAGATAAGACAGCCAAGAAACAGATTCGCGGGTTTATAAAATCGTTTGGTTTGAGTTTCTTTTGGGCATTCTTTGGATGGTTCTATTCAGGTGGTGAAAAATGCGGATTCTCTCAGTTCCCTACATTTGGGTTACAAGCTTTGGACAAAACATTCTACTTTGACTTCAGTATGACATATGTTGGAGCTGGGATGATTTGTTCTCATTTGGTGAATCTGTCGTTGCTCTTCGGTGCCATCCTCTCGTGGGGAATCATGTGGCCTCTCATAGCCCGGCTTAAAGGCGAATGGTTCCCTGCAACATTGAAAGATAATAGTATGCAGGGCTTAAACGGCTACAAGGTGTTTATATGCATTGCACTGATCTTAGGAGATGGGCTTTATAACTTCGTTAAGATACTCTTTTTCACTGGAAGAAGCTTCCACTCTAGACTCTCCAAAACCAACAGCATCAGCACATTGGTAGAAGTTCCAGAAGATAGCACGAAAGAATCCGATAACCTGAAACGAGAGAATGAAGTGTTCGTTCGAGAGAGCATTCCGCTATGGATGGCTTGTGTCGGATACTTATTCTTCTCCCTTGTCTCCATCATTGCCATCCCTCTGATGTTCCCTCAGCTGAAATGGTACTTCGTCCTCGTAGCTTACCTCCTCGCCCCGTCTCTCAGCTTCTGTAACGCCTATGGAGCTGGCTTAACGGATATGAACATGGCTTACAACTATGGTAAAGCGGCGCTCTTTGTGATGGCGGCACTGGCAGGAAAAAACGATGGAGTGGTGGCTGGGATGGTTGCTTGTGGTCTCATCAAATCAATTGTCTCTGTCTCAGCTGACCTGATGCATGATTTCAAGACGGGACATCTTACGCAAACCTCGCCCCGCTCAATGCTTGTTGCACAAGCCATAGGGACAGCGATAGGCTGCGTGGTTGCGCCACTCACCTTCTTCCTCTTCTACAAGGCGTTTGATGTTGGAAACCAAAATGGTGAATACAAAGCTCCTTATGCTATGATATACAGAAACATGGCTATTATCGGTGTTCAAGGTCCCTCCGCTCTCCCCAAGCATTGCCTAGAGCTTTGCTACGGATTCTTTGCCTTTGCGGTTGCTGCCAACTTGGCAAGAGACCTCTTACCAGATAAGCCAGGGAAGTGGATCCCACTCCCGATGGCAATGGCTGTACCGTTCCTGGTGGGTGGGTCGTTCGCAATCGATATGTGTATCGGGAGCTTAGTGGTATACGTTTGGAAAAAGGTGAATCGTAAGAAGGCAGATGTGATGGTTCCAGCTGTTGCATCAGGTTTGATATGTGGAGATGGTCTCTGGATTCTGCCTTCTTCTTTGCTGGCTCTGGCTAAGGTTAGACCTCCTATCTGTATGAACTTCACTGCGGCTCATTAAGGCAGAAAGATTTTCCAGACAAAACCCGAACTTACCGCCGGAGAAATGTATAGTAGATGTGGTTAGGTTAGGAGTAGACAGTTAAAGAGGGATGAAACCAAACTTACATGTCTTATGTAATATTTATACTTTTGGAATAAGAATGAACAGAAAGAGAGTTGGTTTCTTCTTTTACCGGCG
CDS Sequence
Protein Sequence