Gene Details:
- Gene ID: AT5G24140
- Gene Symbol: SQP2
- Gene Name: squalene monooxygenase 2
- Description: squalene monooxygenase 2;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000256 — root hair cell — célula del pelo de la raíz (Spanish, exact), 根毛細胞 (Japanese, exact)
- PO:0000262 — trichoblast — tricoblasto (Spanish, exact), 根毛形成細胞、トリコブラスト (Japanese, exact), hair cell (related)
Function-related keywords:
Literature:
- An example of intron junctional sliding in the gene families encoding squalene monooxygenase homologues in Arabidopsis thaliana and Brassica napus. DOI: 10.1023/a:1006172120929 ; PMID: 10350086
- Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism. DOI: 10.1023/a:1023005504702 ; PMID: 12777052
- Expression profiling of cytokinin action in Arabidopsis. DOI: 10.1104/pp.103.021436 ; PMID: 12913156
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development. DOI: 10.1105/tpc.106.047688 ; PMID: 17337630
- Arabidopsis thaliana squalene epoxidase 1 is essential for root and seed development. DOI: 10.1074/jbc.M611831200 ; PMID: 17426032
- A gene regulatory network for root epidermis cell differentiation in Arabidopsis. DOI: 10.1371/journal.pgen.1002446 ; PMID: 22253603
- An example of intron junctional sliding in the gene families encoding squalene monooxygenase homologues in Arabidopsis thaliana and Brassica napus. DOI: 10.1023/a:1006172120929 ; PMID: 10350086
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Sequences:
cDNA Sequence
- >AT5G24140.1
ATAGTTTATTACATATTTTGGCTTGTTTGACATTGTGGGTTTCTCCTATATATTTAACGTTCACTCCAGGTACAAGGCATATATATTATTACTAAGCGGTAATGGCAATGACTTACGCGTGGTTATGGACGCTTCTCGCCTTTGTTCTGACATGGATGGTTTTTCACCTCATCAAGATGAAGAAGGCGGCAACCGGAGATTTAGAGGCCGAGGCAGAAGCAAGAAGAGATGGTGCAACGGATGTCATCATTGTTGGGGCGGGTGTTGCAGGCGCTTCTCTTGCTTATGCTTTAGCTAAGGATGGACGACGAGTACATGTGATAGAGAGGGACTTAAAAGAGCCACAAAGATTCATGGGAGAGCTGATGCAAGCGGGAGGTCGCTTCATGTTAGCCCAGCTTGGCCTCGAAGATTGTTTGGAGGACATAGACGCACAAGAAGCGAAGTCCTTGGCAATATACAAGGATGGAAAACACGCGACATTGCCTTTTCCAGATGACAAGAGTTTTCCTCATGAGCCAGTAGGTAGACTCTTACGTAATGGTCGGCTGGTACAACGTTTACGCCAAAAAGCAGCTTCTCTTAGCAATGTTCAATTAGAAGAAGGAACAGTGAAGTCTTTAATTGAAGAAGAAGGAGTGGTCAAAGGAGTGACATACAAAAATAGCGCAGGCGAAGAAATAACGGCCTTTGCACCTCTTACTGTCGTATGCGATGGTTGTTATTCGAACCTTCGTCGGTCACTCGTGGATAATACTGAGGAAGTCCTCTCGTACATGGTGGGTTACGTCACGAAGAATAGCCGACTTGAAGATCCCCATAGTCTACATTTGATATTTTCTAAACCTTTGGTTTGTGTTATATATCAAATAACCAGTGATGAAGTTCGTTGTGTTGCCGAAGTTCCCGCTGATAGTATTCCTTCTATATCGAATGGTGAAATGTCTACCTTCCTCAAGAAATCAATGGCTCCTCAGATACCTGAAACTGGAAATCTTCGGGAGATATTTTTGAAAGGCATAGAGGAAGGATTACCAGAGATAAAATCAACAGCGACGAAAAGTATGTCATCGAGATTGTGTGATAAAAGAGGAGTGATTGTGTTGGGAGATGCATTCAATATGCGTCATCCTATAATCGCGTCAGGAATGATGGTTGCACTCTCGGACATTTGCATTCTACGCAATCTTCTCAAACCATTGCCTAACCTCAGCAATACTAAGAAAGTCTCTGATCTTGTCAAGTCCTTTTACATCATCCGCAAGCCAATGTCAGCGACCGTGAACACGCTCGCGAGTATCTTTTCACAAGTGCTTGTTGCTACAACAGACGAAGCAAGAGAGGGAATGCGACAAGGCTGCTTCAATTACCTAGCTCGTGGAGATTTTAAAACAAGGGGATTGATGACTATTCTCGGAGGCATGAACCCTCACCCTCTTACTCTAGTCCTTCATCTTGTAGCCATCACCCTTACGTCCATGGGCCACTTGCTCTCTCCGTTTCCTTCGCCTCGTCGCTTTTGGCATAGCCTCAGAATTCTTGCCTGGGCTTTGCAAATGTTGGGTGCACATTTAGTGGATGAAGGATTCAAGGAAATGTTGATTCCAACAAACGCAGCTGCTTATCGAAGGAACTATATCGCCACAACCACTGTTTGATCAATCCATAACACGAAGACTGTTTTATTCGGAGATGAAAAATAACAACTCAAACAGTTAACTTTCTACAACCAAATAAATAATTGTGTGTATATGAAGTTGAGCCTATGGTTAAGCTCTACTGAATTGTGTTGAAAACAAACATGGATATGTTACATGCTAATTTGTTATATTCTATTTATTGATTCTTGATTTTCTGCTTATGAAATTTTCTAATGTTTAGTCCAG
CDS Sequence
Protein Sequence