Information report for AT5G23990
Gene Details
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Functional Descriptions
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
Functional Keywords
Literature and News
- Analysis of sequence, map position, and gene expression reveals conserved essential genes for iron uptake in Arabidopsis and tomato. DOI: 10.1104/pp.104.047233 ; PMID: 15531708
- Molecular and biochemical characterization of the Fe(III) chelate reductase gene family in Arabidopsis thaliana. DOI: 10.1093/pcp/pci163 ; PMID: 16006655
- Construction of a genetic linkage map of Thlaspi caerulescens and quantitative trait loci analysis of zinc accumulation. DOI: 10.1111/j.1469-8137.2005.01631.x ; PMID: 16539600
- Large expression differences in genes for iron and zinc homeostasis, stress response, and lignin biosynthesis distinguish roots of Arabidopsis thaliana and the related metal hyperaccumulator Thlaspi caerulescens. DOI: 10.1104/pp.106.082073 ; PMID: 16998091
- Mining the Arabidopsis thaliana genome for highly-divergent seven transmembrane receptors. DOI: 10.1186/gb-2006-7-10-r96 ; PMID: 17064408
- Quantitative trait locus mapping for seed mineral concentrations in two Arabidopsis thaliana recombinant inbred populations. DOI: 10.1111/j.1469-8137.2008.02544.x ; PMID: 18631293
- Vacuolar nicotianamine has critical and distinct roles under iron deficiency and for zinc sequestration in Arabidopsis. DOI: 10.1105/tpc.111.095042 ; PMID: 22374397
- The diverse roles of FRO family metalloreductases in iron and copper homeostasis. DOI: 10.3389/fpls.2014.00100 ; PMID: 24711810
- Chromate alters root system architecture and activates expression of genes involved in iron homeostasis and signaling in Arabidopsis thaliana. DOI: 10.1007/s11103-014-0210-0 ; PMID: 24928490
- Arabidopsis Pollen Fertility Requires the Transcription Factors CITF1 and SPL7 That Regulate Copper Delivery to Anthers and Jasmonic Acid Synthesis. DOI: 10.1105/tpc.17.00363 ; PMID: 29114014
- FIT and bHLH Ib transcription factors modulate iron and copper crosstalk in Arabidopsis. DOI: 10.1111/pce.14000 ; PMID: 33464620
- CITF1 Functions Downstream of SPL7 to Specifically Regulate Cu Uptake in Arabidopsis. DOI: 10.3390/ijms23137239 ; PMID: 35806241
- Expression profiling of the Arabidopsis ferric chelate reductase (FRO) gene family reveals differential regulation by iron and copper. DOI: 10.1007/s00425-005-0165-0 ; PMID: 16362328
Gene Resources
- UniProt: A0A384KSB2
- EMBL: LUHQ01000005
- AlphaFoldDB: A0A384KSB2
- EnsemblPlants: AT5G23990.2
- Gramene: AT5G23990.2
- ExpressionAtlas: AT5G23990
- InterPro: IPR000778, IPR013112, IPR013121
- PANTHER: PTHR11972, PTHR11972:SF79
- SUPFAM: SSF52343, SSF63380
- PROSITE: PS51384
- Gene3D: 3.40.50.80
- SWISS-MODEL: A0A384KSB2
- Conserved Domain Database: cd06186
Sequences
cDNA Sequence
- >AT5G23990.2
ATAAAACACACACTTACATAAGTATATTGTGGATAATAACATAAAAGACAAAATGGGGAATATGAGAAGCTTAGTGAAGATGTTAATGGTGGTTCTGTTTCTTGGATGGATTTTCGTTTGGATTATGATTTCAACTAATCGTTTCCAAAACATATGGACCCCCAAACTCGCCAAGTATCTCAAAACTACTTATTTTGGTCCTCAAGGCATGAATCTTGTGCTACTCACGGTTCCAATGATGTTCATTGCGGTTCTGAGCTGTGTTTATTTGCATACCCAAAAGCAACCCTCCCAAACTCAAAGAGAATGGAAGGTAAAAGGGAGAATGGGGAGGGTGATGATGGTTATGAACCCATTGGGGATAGTGACAGCCACAGAGTTGACTTTTTCTCTGTTGTTCCTGGCTCTTTTAGTTTGGGCTCTCTCCAATTATCTCTACCTTAGCTATCACGTCCACCTTCATAACCATGACAACGCCAAAATATGGCAGGCAAAGTTTAGGGCTTTTGGACTGAGGATAGGTTACGTAGGCCACTACTGCTGGGCCTTTTTGTTCTTCCCGGTGACAAGAGCCTCTACGATCCTGCCACTTGTCGGGTTAACGTCGGAGTCAAGCATAAAATATCACATTTGGCTTGGACATGTCTCAAATTTTTGCTTCCTCGTTCACACAGTCGTTTTCCTTATCTACTGGGCCATGGTCAATAAGTTGATGGAGACGTTTGCATGGAATGCAACATATGTGCCTAATCTGGCCGGAACAATAGCGATGGTGATTGGAATAGCGATTTGGGTGACGAGTTTACCATCCTTTAGACGAAAGAAGTTTGAAATTTTCTTCTACACTCACCATCTCTACGGTCTCTACATAGTCTTCTACGCAATCCACGTGGGAGACTCATGGTTCTGCATGATCTTGCCAAACATCTTCCTCTTTTTCATAGACCGCTACTTGAGATTCTTACAATCTACCAAGAGATCCAGACTTGTTTCCGCTAAGATTTTACCTTCAGACAACCTTGAACTCACTTTCGCCAAAACTTCAGGTTTACATTATACACCAACAAGCATATTGTTTCTACATGTGCCGAGCATTTCCAAGCTTCAATGGCATCCATTCACAATAACTTCGAGCAGCAACTTGGAGAAAGATACACTAAGTGTTGTAATCAGAAAACAGGGAAGTTGGACTCAAAAACTTTACACACATCTCTCTTCTTCCATTGATTCTCTCGAAGTTTCTACTGAAGGTCCTTATGGCCCTAACTCTTTTGATGTCTCGAGGCACGATTCTCTAATACTAGTGGGCGGTGGTAGCGGAGTTACACCCTTCATTTCCGTGATCAGGGAACTCATATTTCAGAGCCAAAACCGGAGCACAAAGCTACCAAATGTTCTCCTTGTTTGTGCCTTTAAAAATTACCACGATCTTGCATTTTTAGACCTAATCTTCCCTTCAGATATATCAGTCTCAGACATTTCTAAGCTGAATCTCCGAATTGAGGCTTATATTACAAGAGAAGACAAGAAGCCCGAGACAACTGATGATCACAAACTTCTTCAGACAAAATGGTTCAAACCGCAGCCTCTAGACTCTCCTATCTCACCTGTTCTTGGACCCAACAACTTCCTTTGGCTCGGAGTTGTGATCTTATCATCATTCGTCATGTTTCTCTTGCTCATAGGGATCGTCACACGTTACTATATATACCCTGTTGACCATAACACAGGATCGATCTACAATTTCACGTATAGAGTGCTTTGGGTCATGTTCCTAGGATGTGTGTGCATTTTCATCTCGTCAAGCATAATTTTCTTGTGGCGCAAGAAAGAAAATAAAGAAGGAGATAAGGACTCCAAGAAGCAGGTACAGAGCGTAGAGTTTCAGACACCCACGTCTTCTCCAGGTTCATGGTTTCACGGCCACGAGAGAGAGCTCGAGAGCGTACCCTATCAATCTATAGTACAAGCCACTTCAGTCCACTTCGGCTCCAAACCTAATCTGAAAAAGATTCTATTTGAGGCTGAGGGTTCGGAAGACGTTGGGGTGATGGTTTGCGGACCAAAAAAGATGAGACATGAAGTTGCAAAAATATGTTCATCTGGTTTGGCTAAGAACCTTCACTTTGAGGCAATTAGTTTCAACTGGTGATCTATTCCATGTTCTAACTATATATGTTTGCTTTTTTTTATTATATTCATCGTAATAACCGTTGATATAAGATGGTTTGCTTTTCAATTATTTTTTTCTTCTTT - >AT5G23990.3
ATAAAACACACACTTACATAAGTATATTGTGGATAATAACATAAAAGACAAAATGGGGAATATGAGAAGCTTAGTGAAGATGTTAATGGTGGTTCTGTTTCTTGGATGGATTTTCGTTTGGATTATGATTTCAACTAATCGTTTCCAAAACATATGGACCCCCAAACTCGCCAAGTATCTCAAAACTACTTATTTTGGTCCTCAAGGCATGAATCTTGTGCTACTCACGGTTCCAATGATGTTCATTGCGGTTCTGAGCTGTGTTTATTTGCATACCCAAAAGCAACCCTCCCAAACTCAAAGAGAATGGAAGGTAAAAGGGAGAATGGGGAGGGTGATGATGGTTATGAACCCATTGGGGATAGTGACAGCCACAGAGTTGACTTTTTCTCTGTTGTTCCTGGCTCTTTTAGTTTGGGCTCTCTCCAATTATCTCTACCTTAGCTATCACGTCCACCTTCATAACCATGACAACGCCAAAATATGGCAGGCAAAGTTTAGGGCTTTTGGACTGAGGATAGGTTACGTAGGCCACTACTGCTGGGCCTTTTTGTTCTTCCCGGTGACAAGAGCCTCTACGATCCTGCCACTTGTCGGGTTAACGTCGGAGTCAAGCATAAAATATCACATTTGGCTTGGACATGTCTCAAATTTTTGCTTCCTCGTTCACACAGTCGTTTTCCTTATCTACTGGGCCATGGTCAATAAGTTGATGGAGACGTTTGCATGGAATGCAACATATGTGCCTAATCTGGCCGGAACAATAGCGATGGTGATTGGAATAGCGATTTGGGTGACGAGTTTACCATCCTTTAGACGAAAGAAGTTTGAAATTTTCTTCTACACTCACCATCTCTACGGTCTCTACATAGTCTTCTACGCAATCCACGTGGGAGACTCATGGTTCTGCATGATCTTGCCAAACATCTTCCTCTTTTTCATAGACCGCTACTTGAGATTCTTACAATCTACCAAGAGATCCAGACTTGTTTCCGCTAAGATTTTACCTTCAGACAACCTTGAACTCACTTTCGCCAAAACTTCAGGTTTACATTATACACCAACAAGCATATTGTTTCTACATGTGCCGAGCATTTCCAAGCTTCAATGGCATCCATTCACAATAACTTCGAGCAGCAACTTGGAGAAAGATACACTAAGTGTTGTAATCAGAAAACAGGGAAGTTGGACTCAAAAACTTTACACACATCTCTCTTCTTCCATTGATTCTCTCGAAGTTTCTACTGAAGGTCCTTATGGCCCTAACTCTTTTGATGTCTCGAGGCACGATTCTCTAATACTAGTGGGCGGTGGTAGCGGAGTTACACCCTTCATTTCCGTGATCAGGGAACTCATATTTCAGAGCCAAAACCGGAGCACAAAGCTACCAAATGTTCTCCTTGTTTGTGCCTTTAAAAATTACCACGATCTTGCATTTTTAGACCTAATCTTCCCTTCAGATATATCAGTCTCAGACATTTCTAAGCTGAATCTCCGAATTGAGGCTTATATTACAAGAGAAGACAAGAAGCCCGAGACAACTGATGATCACAAACTTCTTCAGACAAAATGGTTCAAACCGCAGCCTCTAGACTCTCCTATCTCACCTGTTCTTGGACCCAACAACTTCCTTTGGCTCGGAGTTGTGATCTTATCATCATTCGTCATGTTTCTCTTGCTCATAGGGATCGTCACACGTTACTATATATACCCTGTTGACCATAACACAGGATCGATCTACAATTTCACGTATAGAGTGCTTTGGGTCATGTTCCTAGGATGTGTGTGCATTTTCATCTCGTCAAGCATAATTTTCTTGTGGCGCAAGAAAGAAAATAAAGAAGGAGATAAGGACTCCAAGAAGCAGGTACAGAGCGTAGAGTTTCAGACACCCACGTCTTCTCCAGGTTCATGGTTTCACGGCCACGAGAGAGAGCTCGAGAGCGTACCCTATCAATCTATAGTACAAGCCACTTCAGTCCACTTCGGCTCCAAACCTAATCTGAAAAAGATTCTATTTGAGGCTGAGGGTTCGGAAGACGTTGGGGTGATGGTTTGCGGACCAAAAAAGATGAGACATGAAGTTGCAAAAATATGTTCATCTGGTTTGGCTAAGAACCTTCACTTTGAGGCAATTAGTTTCAACTGGTGATCTATTCCATGTTCTAACTATATATGTTTGCTTTTTTTTATTATATTCATCGTAATAACCGTTGATATAAGATGGTTTGCTTTTCAATTATTTTTTTCTTCTTT - >AT5G23990.1
ATAAAACACACACTTACATAAGTATATTGTGGATAATAACATAAAAGACAAAATGGGGAATATGAGAAGCTTAGTGAAGATGTTAATGGTGGTTCTGTTTCTTGGATGGATTTTCGTTTGGATTATGATTTCAACTAATCGTTTCCAAAACATATGGACCCCCAAACTCGCCAAGTATCTCAAAACTACTTATTTTGGTCCTCAAGGCATGAATCTTGTGCTACTCACGGTTCCAATGATGTTCATTGCGGTTCTGAGCTGTGTTTATTTGCATACCCAAAAGCAACCCTCCCAAACTCAAAGAGAATGGAAGGTAAAAGGGAGAATGGGGAGGGTGATGATGGTTATGAACCCATTGGGGATAGTGACAGCCACAGAGTTGACTTTTTCTCTGTTGTTCCTGGCTCTTTTAGTTTGGGCTCTCTCCAATTATCTCTACCTTAGCTATCACGTCCACCTTCATAACCATGACAACGCCAAAATATGGCAGGCAAAGTTTAGGGCTTTTGGACTGAGGATAGGTTACGTAGGCCACTACTGCTGGGCCTTTTTGTTCTTCCCGGTGACAAGAGCCTCTACGATCCTGCCACTTGTCGGGTTAACGTCGGAGTCAAGCATAAAATATCACATTTGGCTTGGACATGTCTCAAATTTTTGCTTCCTCGTTCACACAGTCGTTTTCCTTATCTACTGGGCCATGGTCAATAAGTTGATGGAGACGTTTGCATGGAATGCAACATATGTGCCTAATCTGGCCGGAACAATAGCGATGGTGATTGGAATAGCGATTTGGGTGACGAGTTTACCATCCTTTAGACGAAAGAAGTTTGAAATTTTCTTCTACACTCACCATCTCTACGGTCTCTACATAGTCTTCTACGCAATCCACGTGGGAGACTCATGGTTCTGCATGATCTTGCCAAACATCTTCCTCTTTTTCATAGACCGCTACTTGAGATTCTTACAATCTACCAAGAGATCCAGACTTGTTTCCGCTAAGATTTTACCTTCAGACAACCTTGAACTCACTTTCGCCAAAACTTCAGGTTTACATTATACACCAACAAGCATATTGTTTCTACATGTGCCGAGCATTTCCAAGCTTCAATGGCATCCATTCACAATAACTTCGAGCAGCAACTTGGAGAAAGATACACTAAGTGTTGTAATCAGAAAACAGGGAAGTTGGACTCAAAAACTTTACACACATCTCTCTTCTTCCATTGATTCTCTCGAAGTTTCTACTGAAGGTCCTTATGGCCCTAACTCTTTTGATGTCTCGAGGCACGATTCTCTAATACTAGTGGGCGGTGGTAGCGGAGTTACACCCTTCATTTCCGTGATCAGGGAACTCATATTTCAGAGCCAAAACCGGAGCACAAAGCTACCAAATGTTCTCCTTGTTTGTGCCTTTAAAAATTACCACGATCTTGCATTTTTAGACCTAATCTTCCCTTCAGATATATCAGTCTCAGACATTTCTAAGCTGAATCTCCGAATTGAGGCTTATATTACAAGAGAAGACAAGAAGCCCGAGACAACTGATGATCACAAACTTCTTCAGACAAAATGGTTCAAACCGCAGCCTCTAGACTCTCCTATCTCACCTGTTCTTGGACCCAACAACTTCCTTTGGCTCGGAGTTGTGATCTTATCATCATTCGTCATGTTTCTCTTGCTCATAGGGATCGTCACACGTTACTATATATACCCTGTTGACCATAACACAGGATCGATCTACAATTTCACGTATAGAGTGCTTTGGGTCATGTTCCTAGGATGTGTGTGCATTTTCATCTCGTCAAGCATAATTTTCTTGTGGCGCAAGAAAGAAAATAAAGAAGGAGATAAGGACTCCAAGAAGCAGGTACAGAGCGTAGAGTTTCAGACACCCACGTCTTCTCCAGGTTCATGGTTTCACGGCCACGAGAGAGAGCTCGAGAGCGTACCCTATCAATCTATAGTACAAGCCACTTCAGTCCACTTCGGCTCCAAACCTAATCTGAAAAAGATTCTATTTGAGGCTGAGGGTTCGGAAGACGTTGGGGTGATGGTTTGCGGACCAAAAAAGATGAGACATGAAGTTGCAAAAATATGTTCATCTGGTTTGGCTAAGAACCTTCACTTTGAGGCAATTAGTTTCAACTGGTGATCTATTCCATGTTCTAACTATATATGTTTGCTTTTTTTTATTATATTCATCGTAATAACCGTTGATATAAGATGGTTTGCTTTTCAATTATTTTTTTCTTCTTT
CDS Sequence
Protein Sequence