Information report for AT5G23980
Gene Details
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Functional Descriptions
- CS3777 — defective in inducible ferric-chelate reductase activity under iron-deficient growth conditions; capable of acidifying the rhizosphere under iron-deficiency and accumulate more Zn and Mn in their shoots relative to wt plants regardless of iron status; do not translocate radiolabeled iron to the shoots when roots are presented with a tightly chelated form of Fe(III); lacks trichomes on stems and leaves, some trichomes in leaf margins; plants are small and very chlorotic when grown under high light.
Functional Keywords
Literature and News
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
- Analysis of sequence, map position, and gene expression reveals conserved essential genes for iron uptake in Arabidopsis and tomato. DOI: 10.1104/pp.104.047233 ; PMID: 15531708
- Molecular and biochemical characterization of the Fe(III) chelate reductase gene family in Arabidopsis thaliana. DOI: 10.1093/pcp/pci163 ; PMID: 16006655
- Expression profiling of the Arabidopsis ferric chelate reductase (FRO) gene family reveals differential regulation by iron and copper. DOI: 10.1007/s00425-005-0165-0 ; PMID: 16362328
- Construction of a genetic linkage map of Thlaspi caerulescens and quantitative trait loci analysis of zinc accumulation. DOI: 10.1111/j.1469-8137.2005.01631.x ; PMID: 16539600
- A quantitative analysis of Arabidopsis plasma membrane using trypsin-catalyzed (18)O labeling. DOI: 10.1074/mcp.M500414-MCP200 ; PMID: 16635983
- Large expression differences in genes for iron and zinc homeostasis, stress response, and lignin biosynthesis distinguish roots of Arabidopsis thaliana and the related metal hyperaccumulator Thlaspi caerulescens. DOI: 10.1104/pp.106.082073 ; PMID: 16998091
- Quantitative trait locus mapping for seed mineral concentrations in two Arabidopsis thaliana recombinant inbred populations. DOI: 10.1111/j.1469-8137.2008.02544.x ; PMID: 18631293
- The diverse roles of FRO family metalloreductases in iron and copper homeostasis. DOI: 10.3389/fpls.2014.00100 ; PMID: 24711810
- Arabidopsis Pollen Fertility Requires the Transcription Factors CITF1 and SPL7 That Regulate Copper Delivery to Anthers and Jasmonic Acid Synthesis. DOI: 10.1105/tpc.17.00363 ; PMID: 29114014
- FIT and bHLH Ib transcription factors modulate iron and copper crosstalk in Arabidopsis. DOI: 10.1111/pce.14000 ; PMID: 33464620
- CITF1 Functions Downstream of SPL7 to Specifically Regulate Cu Uptake in Arabidopsis. DOI: 10.3390/ijms23137239 ; PMID: 35806241
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
Gene Resources
- UniProt: A0A178UB87
- EMBL: LUHQ01000005
- AlphaFoldDB: A0A178UB87
- EnsemblPlants: AT5G23980.1
- Gramene: AT5G23980.1
- KEGG: ath:AT5G23980
- Orthologous matrix: YRGLWDM
- ExpressionAtlas: AT5G23980
- InterPro: IPR000778, IPR013112, IPR013121
- PANTHER: PTHR11972, PTHR11972:SF79
- SUPFAM: SSF52343, SSF63380
- PROSITE: PS51384
- Gene3D: 3.40.50.80
- SWISS-MODEL: A0A178UB87
- Conserved Domain Database: cd06186
Sequences
cDNA Sequence
- >AT5G23980.1
CGCAATTATACATCAATACATTGTGGATAAATATATAAACGAGAAAAAATGGGAAATATGAGAAGCTTAGTGAAGACGTTAATGGTGGTTCTATTTCTTGGATGGATTTTGGTTTGGATTATGATTTCAACTAATCTTTTTAAAAGCAAATGGACCCCGAAACTCTCCAAGTATCTCAATACTACTTATTTTGGCCCTCAAGGCACGAATCTTGTGCTTCTCACGGTTCCCATGATGTTCATTGCGGTTCTAAGTTGTGTTTATTTGCATATCCAGAAGAAACCAACCCAACCTCAAAGAGAATGGAAGCTAAAAAGGATAATGGGGAGGGTGATTATGGTGATGAACCCATTGGGGATAGTGACAGCCACGGAGTTAACTTTTTCTCTATTGTTTGTTGCTCTTTTGGCTTGGTCCCTCTACAATTATCTCTACCTTAGCTATCACGTCCACCTTCATAACGACGACAACGCAAAAATATGGCAGGCAAAGTTTAGGGCTTTCGGCCTGAGAATAGGATATGTGGGCAACATCTGTTGGGCCTTTTTGTTCTTCCCGGTGACAAGAGCCTCTACGATTCTGCCACTTGTCGGGTTAACGTCAGAGTCAAGTATAAAATATCACATTTGGCTTGGACATGTCTCAAATTTTTGCTTCCTCGTTCACACAGTCGTTTTCCTTATCTACTGGGCCATGATCAATAAGTTGATGGAGACGTTTGCATGGAATCCAACATATGTGCCTAATCTGGCCGGAACAATAGCGATGGTGATTGGAATAGCGATGTGGGTGACGAGTTTACCATCCTTTAGACGAAAGAAGTTTGAGATTTTCTTCTACACTCACCATCTCTACGGTCTCTATATAGTCTTCTACGTAATCCACGTGGGAGACTCGTGGTTCTGCATGATCTTGCCAAACATCTTTCTCTTTTTTATAGACCGATACTTGAGATTCTTACAATCCACCAAGAGATCCAGACTTGTGTCTGCTAGGATCTTACCTTCAGACAACCTCGAACTCACTTTCTCCAAAACCCCAGGGCTACATTATACCCCAACAAGCATATTGTTTCTACATGTGCCAAGCATTTCGAAGATTCAATGGCATCCATTTACTATAACTTCGAGCAGCAACTTAGAGAAAGATACATTAAGTGTTGTAATCAGAAGACAGGGAAGTTGGACTCAAAAGCTTTACACACATCTCTCTTCTTCCATTGATTCTCTCGAAGTTTCTACTGAGGGTCCGTATGGCCCTAACTCTTTTGATGTCTCAAGGCATAACTCTCTAATACTAGTGAGCGGTGGAAGCGGAATTACACCCTTCATTTCGGTTATCAGAGAACTCATATCTCAGAGCCAAAACAAGAGCACAAAGCTACCAGATGTTCTTCTTGTTTGTTCTTTTAAACATTACCATGATCTTGCGTTTTTAGACCTAATCTTCCCACTGGATATGTCAGCCTCTGACATTTCTAGGCTGAATCTCCGAATTGAGGCCTATATTACAAGAGAAGACAAGAAGCCCGAGACAACTGATGACCACAGACTTCTTCAAACAAAATGGTTTAAACCGCAGCCTCTAGACTCTCCTATCTCACCTGTTCTTGGACCAAACAACTTCCTCTGGCTCGGAGTTGTGATCTTATCATCATTCGTCATGTTTCTCTTGCTCATAGGGATCGTCACACGTTACTATATATACCCTGTTGACCATAATACAGGATCCATCTACAATTTCTCATATAGAGGGCTTTGGGACATGTTTCTAGGAAGTGCGTGCATTTTCATCTCTTCCAGTGTAGTTTTCTTATGGCGCAAGAAACAGAACAAAGAAGGGGATAAGGAGTTCAAGAATCAGGTACAAAGCGTAGAGTTTCAGACACCCACTTCTTCTCCAGGTTCATGGTTCCACGGCCACGAGAGAGAGCTCGAGAGTGTTCCCTATCAATCTATAGTACAAGCCACTTCAGTCCACTTCGGCTCCAAACCTAATCTGAAAAAGATTCTACTTGAGGCTGAGGGTTCAGAAGACGTTGGGGTGATGGTTTGCGGACCAAGAAAGATGAGACATGAAGTTGCAAAGATATGTTCATCTGGTTTGGCTAAGAACCTTCACTTTGAGGCAATTAGTTTCAACTGGTGATGTATTCCATGTTCTAACTATGTGTGTTTATATTCATCGTAATAACTTTTGATGTTTTAGATGGTTTGCTGTTTGATTTTCTATTTTTAATACAATTTAAAATGGAATGTTAATGTATATGTTATCCTGCACCTTCATTATTATCAATTTCTAATCATCATTAATCCTATTGAGCCCATTATAGACTTA
CDS Sequence
Protein Sequence