Gene Details:
- Gene ID: AT5G23940
- Gene Symbol: DCR, EMB3009, PEL3
- Gene Name: DEFECTIVE IN CUTICULAR RIDGES, EMBRYO DEFECTIVE 3009, PERMEABLE LEAVES3
- Description: HXXXD-type acyl-transferase family protein;(source:Araport11)
- TAIR Accession: locus:2172813
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0010090 — acts upstream of or within — trichome morphogenesis
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0005737 — located in — cytoplasm
Germplasm Phenotype:
- CS24357 — embryo defective; developmental arrest of mutant embryos occurs at preglobular stage.
Function-related keywords:
Literature:
- Isolation, sequence analysis, and expression studies of florally expressed cDNAs in Arabidopsis. DOI: 10.1023/B:PLAN.0000019063.18097.62 ; PMID: 15010618
- Microarray analysis of genes that respond to gamma-irradiation in Arabidopsis. DOI: 10.1021/jf0486895 ; PMID: 15713015
- Analysis of sequence, map position, and gene expression reveals conserved essential genes for iron uptake in Arabidopsis and tomato. DOI: 10.1104/pp.104.047233 ; PMID: 15531708
- Transcriptome analysis of Arabidopsis wild-type and gl3-sst sim trichomes identifies four additional genes required for trichome development. DOI: 10.1093/mp/ssp037 ; PMID: 19626137
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Heterosis manifestation during early Arabidopsis seedling development is characterized by intermediate gene expression and enhanced metabolic activity in the hybrids. DOI: 10.1111/j.1365-313X.2012.05021.x ; PMID: 22487254
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Starting to gel: how Arabidopsis seed coat epidermal cells produce specialized secondary cell walls. DOI: 10.3390/ijms16023452 ; PMID: 25658798
- Functional roles of three cutin biosynthetic acyltransferases in cytokinin responses and skotomorphogenesis. DOI: 10.1371/journal.pone.0121943 ; PMID: 25803274
- Connecting the Molecular Structure of Cutin to Ultrastructure and Physical Properties of the Cuticle in Petals of Arabidopsis. DOI: 10.1104/pp.16.01637 ; PMID: 27994007
- The chemical NJ15 affects hypocotyl elongation and shoot gravitropism via cutin polymerization. DOI: 10.1080/09168451.2018.1484278 ; PMID: 29912637
Sequences:
cDNA Sequence
- >AT5G23940.1
GAAACCTTAAATGCCTAACCCAACTACACACTGCACATCTCTATAAAACACAGCCTTTAGTTCTTTCTTTACCACTCTCCACACTACACTCTAGTCTCACACAAAAAGAAAAACAATAGCTAATTTAATATCTTCTTGTGATCATCACAATACCACATTGATCCAAGGCCAGTTAAAATCTCTTTCACCATGAAGATAAAGATTATGAGCAAAACACATGTGAAACCAACAAAACCAGTACTAGGGAAGAAACAATTCCACCTCACCACATTTGATCTTCCTTACCTTGCTTTCTACTACAACCAGAAGTTTCTACTCTACAAGTTCCAGAACCTTCTAGATCTCGAGGAACCCACATTCCAAAACGAGGTCGTGGAGAATCTCAAAGATGGTTTGGGTTTGGTTCTTGAAGACTTCTATCAACTCGCCGGTAAGCTGGCCAAGGACGATGAAGGAGTCTTCCGTGTTGAGTACGACGCTGAAGACTCAGAGATCAACGGCGTAGAGTTCTCCGTCGCTCATGCTGCTGACGTAACCGTCGATGATCTAACGGCTGAGGACGGGACGGCTAAGTTCAAGGAGTTGGTTCCTTACAATGGGATCTTGAACTTGGAAGGACTTAGCAGACCACTCCTTGCTGTCCAGGTGACCAAGCTAAAAGATGGGCTTGCAATGGGCCTAGCTTTCAATCACGCAGTCTTAGACGGGACATCCACGTGGCATTTTATGAGCTCATGGGCCGAGATCTGTCGTGGAGCCCAATCCATCTCGACTCAACCTTTCCTTGACCGATCGAAGGCGCGTGACACGCGCGTGAAGCTCGACCTCACTGCTCCCAAGGACCCCAACGAGACCTCCAACGGCGAAGATGCTGCCAATCCGACGGTGGAACCGCCGCAGCTAGTAGAAAAGATCTTCAGGTTCTCGGACTTTGCTGTCCACACGATCAAGTCAAGAGCTAATTCAGTAATCCCATCGGACAGTTCAAAACCATTCTCAACATTCCAATCCCTGACATCACACATCTGGCGCCACGTCACCTTAGCGCGTGGACTCAAACCGGAGGACATAACTATTTTCACCGTCTTCGCCGACTGTCGCCGCCGCGTTGATCCTCCAATGCCGGAGGAATATTTCGGAAACTTGATTCAAGCGATCTTCACCGGAACAGCGGCGGGGCTACTAGCAGCGCACGGACCGGAGTTCGGAGCTTCGGTGATCCAGAAAGCAATCGCGGCACACGACGCGAGTGTGATCGACGCACGTAACGACGAGTGGGAGAAATCGCCGAAGATTTTTCAATTCAAAGACGCCGGAGTGAATTGTGTTGCGGTGGGAAGCTCACCGAGGTTTCGTGTTTACGAGGTGGATTTCGGGTTTGGAAAACCGGAAACGGTTAGGAGCGGGTCGAATAACCGGTTTAATGGGATGATGTATTTGTACCAAGGTAAAGCAGGAGGCATAAGTATTGATGTGGAGATAACTCTTGAAGCTTCTGTTATGGAGAAGCTTGTGAAGAGCAAAGAGTTTTTACTTAGTGAGGAGGAAGAAGAAGATGATGGAAAGAAGCTCACCAATGGTAATGGCCATGTCAATGGTAATGGTAATGGCTATGTCAATGGAAATGGCAATGGGTTTGTTTGAGTGTTTGTTTAGTTTAAGGTTAATTAGATAATTAATCAAACTACATATTTTGGTTAATTAGCTAATTAATTTGATTAAGGAGAAAAACCTTATGGCTTTTTAAGTATGGTAATAATGTGCTCGTGGTTGATAATAAGCGTGTGTGGGTTATTTGTATGATTATGTAGTGTGTTTGGTTTGGAATTGTAATATTTGGACCATGGTTTTTTAGTACTTATGTTGTTTAAAGTTTCATGTACTGTTGTCAATAAAAAAGAAAAATTAGTTAATGCAATTGTTATCAAATCTGTTTTAACTTTCAAGT
CDS Sequence
Protein Sequence