Information report for AT5G23310
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Superoxide dismutase in Arabidopsis: an eclectic enzyme family with disparate regulation and protein localization. DOI: 10.1104/pp.118.2.637 ; PMID: 9765550
- Full-length messenger RNA sequences greatly improve genome annotation. DOI: 10.1186/gb-2002-3-6-research0029 ; PMID: 12093376
- The water-water cycle is essential for chloroplast protection in the absence of stress. DOI: 10.1074/jbc.M304987200 ; PMID: 12885779
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- The mitochondrial type II peroxiredoxin F is essential for redox homeostasis and root growth of Arabidopsis thaliana under stress. DOI: 10.1074/jbc.M413189200 ; PMID: 15632145
- pTAC2, -6, and -12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression. DOI: 10.1105/tpc.105.036392 ; PMID: 16326926
- Identification of essential subunits in the plastid-encoded RNA polymerase complex reveals building blocks for proper plastid development. DOI: 10.1104/pp.111.184515 ; PMID: 21949211
- Analysis of essential Arabidopsis nuclear genes encoding plastid-targeted proteins. DOI: 10.1371/journal.pone.0073291 ; PMID: 24023856
- Mitogen-activated protein kinase kinase 5 (MKK5)-mediated signalling cascade regulates expression of iron superoxide dismutase gene in Arabidopsis under salinity stress. DOI: 10.1093/jxb/erv305 ; PMID: 26136265
- SELENOPROTEIN O is a chloroplast protein involved in ROS scavenging and its absence increases dehydration tolerance in Arabidopsis thaliana. DOI: 10.1016/j.plantsci.2018.02.023 ; PMID: 29576081
- Cytokinin-Regulated Expression of Arabidopsis thaliana PAP Genes and Its Implication for the Expression of Chloroplast-Encoded Genes. DOI: 10.3390/biom10121658 ; PMID: 33322466
- Arabidopsis Seedling Lethal 1 Interacting With Plastid-Encoded RNA Polymerase Complex Proteins Is Essential for Chloroplast Development. DOI: 10.3389/fpls.2020.602782 ; PMID: 33391315
- The Plastid-Encoded RNA Polymerase-Associated Protein PAP9 Is a Superoxide Dismutase With Unusual Structural Features. DOI: 10.3389/fpls.2021.668897 ; PMID: 34276730
- pTAC2, -6, and -12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression. DOI: 10.1105/tpc.105.036392 ; PMID: 16326926
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178UFT0
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A178UFT0
- EnsemblPlants: AT5G23310.1
- Gramene: AT5G23310.1
- KEGG: ath:AT5G23310
- Orthologous matrix: HNQFWEM
- ExpressionAtlas: AT5G23310
- InterPro: IPR001189, IPR019831, IPR019832
- PANTHER: PTHR42769, PTHR42769:SF10
- SUPFAM: SSF46609, SSF54719
- PROSITE: PS00088
- Gene3D: 1.10.287.990, 3.55.40.20
- OrthoDB: A0A178UFT0
- SWISS-MODEL: A0A178UFT0
Sequences
cDNA Sequence
- >AT5G23310.1
TTTCCGGTTCGATTTACCGGTTTAATGTAGTTAACCGGGGTAAAATCTTATATGTTAACCGGTTTGAAAAGAGATTGATAAGGAAGGCCCTTTCTCTGAAAAAGCGAGACCAAGAGTGCGAAGTAGCTCTCTGTCTTTCGAAGCAGAAGTGAGACTTTGACGACAACAGTGGGAGGAACTATGAGTTCTTGTGTTGTGACGACAAGCTGTTTCTATACAATTTCAGATTCTAGTATACGTTTGAAATCCCCCAAGCTCCTCAATCTGAGTAACCAGCAGAGAAGACGCTCTCTTAGGTCTCGAGGTGGTTTAAAGGTTGAAGCTTACTACGGTCTAAAGACACCTCCTTATCCACTTGATGCTTTGGAGCCGTATATGAGTAGAAGAACACTAGAAGTGCATTGGGGAAAACACCATCGAGGTTATGTAGATAATCTGAATAAACAGTTAGGGAAAGATGATAGACTCTATGGATACACCATGGAAGAGCTTATCAAGGCTACATACAACAACGGGAATCCTTTACCCGAGTTCAACAACGCTGCACAGGTCTATAACCATGATTTCTTCTGGGAGTCGATGCAACCTGGTGGTGGAGACACGCCTCAAAAGGGTGTTCTTGAGCAGATTGATAAGGATTTTGGTTCTTTCACAAATTTTAGAGAAAAGTTCACTAATGCAGCTCTTACTCAGTTTGGTTCTGGATGGGTCTGGCTTGTCTTAAAGAGGGAAGAGAGAAGGCTTGAGGTGGTCAAAACCTCAAACGCCATTAACCCACTCGTGTGGGACGATATTCCAATCATCTGCGTGGATGTGTGGGAGCACTCTTATTATCTGGACTACAAGAACGACAGGGCTAAGTATATAAACACATTTCTGAACCACTTGGTGTCGTGGAACGCTGCCATGAGTCGGATGGCCCGTGCAGAAGCGTTTGTGAATCTTGGTGAACCCAACATCCCAATCGCTTAAGCTAAACACAACTCCTTGGAAACTTGGGCAGTCTCATTTTTGCAAACAGAGGTCTCAAGTCCCAAGTCCCAACCAACAAAACAAGAGTTGCTTTCTGAATGTGACCCATCTTTTTGTTCTGTGTAATTTAGCGACAGTTTTCTCTTCTTTTGCCTTTTGAGAGACTCTCTAGCTTTAAGATCATCAGTGAGCCCTGTATGGTGACAGTAATGTTAGTGACGCAATTAACCCTTATTAAGTTATAATAAAACGAAGGCTGGCTCACGTGACCCGCACGTGACTGAGAGTATCCG
CDS Sequence
Protein Sequence