Information report for AT5G23090
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- SALK_028595C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:decreased,cold:decreased,oxidative stress:decreased,osmotic stress:no change,salt stress:no change,ABA:no change,hypoxia:no change.
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Generation of Arabidopsis protein chips for antibody and serum screening. DOI: 10.1023/a:1025424814739 ; PMID: 14558660
- Comparative proteome analysis of differentially expressed proteins induced by K+ deficiency in Arabidopsis thaliana. DOI: 10.1002/pmic.200400898 ; PMID: 15449379
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The Arabidopsis thaliana Nuclear Factor Y Transcription Factors. DOI: 10.3389/fpls.2016.02045 ; PMID: 28119722
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Analysis of the Arabidopsis nuclear proteome and its response to cold stress. DOI: 10.1046/j.1365-313x.2003.01907.x ; PMID: 14617066
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Analysis of the Arabidopsis nuclear proteome and its response to cold stress. DOI: 10.1046/j.1365-313x.2003.01907.x ; PMID: 14617066
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Analysis of the Arabidopsis nuclear proteome and its response to cold stress. DOI: 10.1046/j.1365-313x.2003.01907.x ; PMID: 14617066
Gene Resources
- UniProt: B9DHA9
- EMBL: AK317460
- AlphaFoldDB: B9DHA9
- EnsemblPlants: AT5G23090.1, AT5G23090.2, AT5G23090.5
- Gramene: AT5G23090.1, AT5G23090.2, AT5G23090.5
- KEGG: ath:AT5G23090
- ExpressionAtlas: AT5G23090
- InterPro: IPR003958, IPR009072, IPR044255
- PANTHER: PTHR47173, PTHR47173:SF3
- SUPFAM: SSF47113
- Gene3D: 1.10.20.10
- OrthoDB: B9DHA9
- SWISS-MODEL: B9DHA9
- Conserved Domain Database: cd22905
Sequences
cDNA Sequence
- >AT5G23090.1
TTTGTTTTAAAATCCAATTGCTATAAGGAAGTTAAAGTTATCTTCACGCGCCGTCTCTAAGCGTTGTAAAAGAAAGTGTGATTCACGCGCTTTGCTTCTTCCGTTTGCCCTAAACGACTCTGCTAGAGAAGACGAAGGAGAGAGAAAATCCCTCCGATTATATTCCGTACAATCCGATCGATTTCCCGGCGCCAGATCTCACCGCGACTCGTCTACTTTCCGATTTGGTTCGTGTTGACTCAGTTACGATCTTCGTGTACAAGCACCTTTAACCTGATGAATTCTGTAGATTAAACTATGGATCCAATGGATATAGTCGGCAAATCCAAGGAAGACGCTTCTCTTCCAAAAGCTACGATGACTAAAATTATAAAGGAGATGTTACCACCAGATGTTCGTGTTGCAAGAGATGCTCAAGATCTTCTCATTGAATGTTGTGTAGAGTTTATAAATCTTGTATCTTCAGAATCTAATGATGTTTGTAACAAAGAGGATAAACGGACGATTGCTCCTGAGCATGTTCTCAAGGCATTACAGGTTCTTGGTTTTGGAGAATACATTGAAGAAGTCTATGCTGCGTATGAGCAACATAAGTATGAAACAATGCAGGACACACAGAGGAGCGTGAAATGGAACCCTGGAGCTCAAATGACTGAGGAGGAAGCAGCAGCTGAGCAACAACGTATGTTTGCAGAAGCACGTGCAAGAATGAATGGAGGTGTTTCGGTTCCTCAACCTGAACATCCAGAAACTGACCAGAGAAGTCCGCAAAGCTAACTGAAACCGTAAGGGTAAGTGTTAGGCAAGAAAAAACAACATCCTTTTAACATTCCCTTGTAAGTTGCAAATGCGTATGTTCTCTGTTTATATGCTCTTAGTATGATATATGTTAGTTAGTGTTTCACGATCTAAAAACACTTGTGATTCAGATGTAATTAGTAAGCATTCCTTGTTTTGTGTTTACTTGTGTCTTGACTAAGCATGGTGGGTCAGGTCTACACAAAGCATCTGATTCGATGACTTACAGGAATCTTAATGTTTGTAGATTGGATAAATTTGGTGATTGGTGTAATTGTTTTTCCATAAACACAATGCAATCATTGTTTAGTGTTGTTAACATTTGCCCTGTGATTCTGACGCGAACCGAGAATACTGTACTGAGCCAAACATAGATTTTTGGTTTTCG - >AT5G23090.2
TTTGTTTTAAAATCCAATTGCTATAAGGAAGTTAAAGTTATCTTCACGCGCCGTCTCTAAGCGTTGTAAAAGAAAGTGTGATTCACGCGCTTTGCTTCTTCCGTTTGCCCTAAACGACTCTGCTAGAGAAGACGAAGGAGAGAGAAAATCCCTCCGATTATATTCCGTACAATCCGATCGATTTCCCGGCGCCAGATCTCACCGCGACTCGTCTACTTTCCGATTTGGTTCGTGTTGACTCAGTTACGATCTTCGTGTACAAGCACCTTTAACCTGATGAATTCTGTAGATTAAACTATGGATCCAATGGATATAGTCGGCAAATCCAAGGAAGACGCTTCTCTTCCAAAAGCTACGATGACTAAAATTATAAAGGAGATGTTACCACCAGATGTTCGTGTTGCAAGAGATGCTCAAGATCTTCTCATTGAATGTTGTGTAGAGTTTATAAATCTTGTATCTTCAGAATCTAATGATGTTTGTAACAAAGAGGATAAACGGACGATTGCTCCTGAGCATGTTCTCAAGGCATTACAGGTTCTTGGTTTTGGAGAATACATTGAAGAAGTCTATGCTGCGTATGAGCAACATAAGTATGAAACAATGCAGGACACACAGAGGAGCGTGAAATGGAACCCTGGAGCTCAAATGACTGAGGAGGAAGCAGCAGCTGAGCAACAACGTATGTTTGCAGAAGCACGTGCAAGAATGAATGGAGGTGTTTCGGTTCCTCAACCTGAACATCCAGAAACTGACCAGAGAAGTCCGCAAAGCTAACTGAAACCGTAAGGGTAAGTGTTAGGCAAGAAAAAACAACATCCTTTTAACATTCCCTTGTAAGTTGCAAATGCGTATGTTCTCTGTTTATATGCTCTTAGTATGATATATGTTAGTTAGTGTTTCACGATCTAAAAACACTTGTGATTCAGATGTAATTAGTAAGCATTCCTTGTTTTGTGTTTACTTGTGTCTTGACTAAGCATGGTGGGTCAGGTCTACACAAAGCATCTGATTCGATGACTTACAGGAATCTTAATGTTTGTAGATTGGATAAATTTGGTGATTGGTGTAATTGTTTTTCCATAAACACAATGCAATCATTGTTTAGTGTTGTTAACATTTGCCCTGTGATTCTGACGCGAACCGAGAATACTGTACTGAGCCAAACATAGATTTTTGGTTTTCG - >AT5G23090.4
TTTGTTTTAAAATCCAATTGCTATAAGGAAGTTAAAGTTATCTTCACGCGCCGTCTCTAAGCGTTGTAAAAGAAAGTGTGATTCACGCGCTTTGCTTCTTCCGTTTGCCCTAAACGACTCTGCTAGAGAAGACGAAGGAGAGAGAAAATCCCTCCGATTATATTCCGTACAATCCGATCGATTTCCCGGCGCCAGATCTCACCGCGACTCGTCTACTTTCCGATTTGGTTCGTGTTGACTCAGTTACGATCTTCGTGTACAAGCACCTTTAACCTGATGAATTCTGTAGATTAAACTATGGATCCAATGGATATAGTCGGCAAATCCAAGGAAGACGCTTCTCTTCCAAAAGCTACGATGACTAAAATTATAAAGGAGATGTTACCACCAGATGTTCGTGTTGCAAGAGATGCTCAAGATCTTCTCATTGAATGTTGTGTAGAGTTTATAAATCTTGTATCTTCAGAATCTAATGATGTTTGTAACAAAGAGGATAAACGGACGATTGCTCCTGAGCATGTTCTCAAGGCATTACAGGTTCTTGGTTTTGGAGAATACATTGAAGAAGTCTATGCTGCGTATGAGCAACATAAGTATGAAACAATGCAGGACACACAGAGGAGCGTGAAATGGAACCCTGGAGCTCAAATGACTGAGGAGGAAGCAGCAGCTGAGCAACAACGTATGTTTGCAGAAGCACGTGCAAGAATGAATGGAGGTGTTTCGGTTCCTCAACCTGAACATCCAGAAACTGACCAGAGAAGTCCGCAAAGCTAACTGAAACCGTAAGGGTAAGTGTTAGGCAAGAAAAAACAACATCCTTTTAACATTCCCTTGTAAGTTGCAAATGCGTATGTTCTCTGTTTATATGCTCTTAGTATGATATATGTTAGTTAGTGTTTCACGATCTAAAAACACTTGTGATTCAGATGTAATTAGTAAGCATTCCTTGTTTTGTGTTTACTTGTGTCTTGACTAAGCATGGTGGGTCAGGTCTACACAAAGCATCTGATTCGATGACTTACAGGAATCTTAATGTTTGTAGATTGGATAAATTTGGTGATTGGTGTAATTGTTTTTCCATAAACACAATGCAATCATTGTTTAGTGTTGTTAACATTTGCCCTGTGATTCTGACGCGAACCGAGAATACTGTACTGAGCCAAACATAGATTTTTGGTTTTCG - >AT5G23090.3
TTTGTTTTAAAATCCAATTGCTATAAGGAAGTTAAAGTTATCTTCACGCGCCGTCTCTAAGCGTTGTAAAAGAAAGTGTGATTCACGCGCTTTGCTTCTTCCGTTTGCCCTAAACGACTCTGCTAGAGAAGACGAAGGAGAGAGAAAATCCCTCCGATTATATTCCGTACAATCCGATCGATTTCCCGGCGCCAGATCTCACCGCGACTCGTCTACTTTCCGATTTGGTTCGTGTTGACTCAGTTACGATCTTCGTGTACAAGCACCTTTAACCTGATGAATTCTGTAGATTAAACTATGGATCCAATGGATATAGTCGGCAAATCCAAGGAAGACGCTTCTCTTCCAAAAGCTACGATGACTAAAATTATAAAGGAGATGTTACCACCAGATGTTCGTGTTGCAAGAGATGCTCAAGATCTTCTCATTGAATGTTGTGTAGAGTTTATAAATCTTGTATCTTCAGAATCTAATGATGTTTGTAACAAAGAGGATAAACGGACGATTGCTCCTGAGCATGTTCTCAAGGCATTACAGGTTCTTGGTTTTGGAGAATACATTGAAGAAGTCTATGCTGCGTATGAGCAACATAAGTATGAAACAATGCAGGACACACAGAGGAGCGTGAAATGGAACCCTGGAGCTCAAATGACTGAGGAGGAAGCAGCAGCTGAGCAACAACGTATGTTTGCAGAAGCACGTGCAAGAATGAATGGAGGTGTTTCGGTTCCTCAACCTGAACATCCAGAAACTGACCAGAGAAGTCCGCAAAGCTAACTGAAACCGTAAGGGTAAGTGTTAGGCAAGAAAAAACAACATCCTTTTAACATTCCCTTGTAAGTTGCAAATGCGTATGTTCTCTGTTTATATGCTCTTAGTATGATATATGTTAGTTAGTGTTTCACGATCTAAAAACACTTGTGATTCAGATGTAATTAGTAAGCATTCCTTGTTTTGTGTTTACTTGTGTCTTGACTAAGCATGGTGGGTCAGGTCTACACAAAGCATCTGATTCGATGACTTACAGGAATCTTAATGTTTGTAGATTGGATAAATTTGGTGATTGGTGTAATTGTTTTTCCATAAACACAATGCAATCATTGTTTAGTGTTGTTAACATTTGCCCTGTGATTCTGACGCGAACCGAGAATACTGTACTGAGCCAAACATAGATTTTTGGTTTTCG - >AT5G23090.5
TTTGTTTTAAAATCCAATTGCTATAAGGAAGTTAAAGTTATCTTCACGCGCCGTCTCTAAGCGTTGTAAAAGAAAGTGTGATTCACGCGCTTTGCTTCTTCCGTTTGCCCTAAACGACTCTGCTAGAGAAGACGAAGGAGAGAGAAAATCCCTCCGATTATATTCCGTACAATCCGATCGATTTCCCGGCGCCAGATCTCACCGCGACTCGTCTACTTTCCGATTTGGTTCGTGTTGACTCAGTTACGATCTTCGTGTACAAGCACCTTTAACCTGATGAATTCTGTAGATTAAACTATGGATCCAATGGATATAGTCGGCAAATCCAAGGAAGACGCTTCTCTTCCAAAAGCTACGATGACTAAAATTATAAAGGAGATGTTACCACCAGATGTTCGTGTTGCAAGAGATGCTCAAGATCTTCTCATTGAATGTTGTGTAGAGTTTATAAATCTTGTATCTTCAGAATCTAATGATGTTTGTAACAAAGAGGATAAACGGACGATTGCTCCTGAGCATGTTCTCAAGGCATTACAGGTTCTTGGTTTTGGAGAATACATTGAAGAAGTCTATGCTGCGTATGAGCAACATAAGTATGAAACAATGCAGGACACACAGAGGAGCGTGAAATGGAACCCTGGAGCTCAAATGACTGAGGAGGAAGCAGCAGCTGAGCAACAACGTATGTTTGCAGAAGCACGTGCAAGAATGAATGGAGGTGTTTCGGTTCCTCAACCTGAACATCCAGAAACTGACCAGAGAAGTCCGCAAAGCTAACTGAAACCGTAAGGGTAAGTGTTAGGCAAGAAAAAACAACATCCTTTTAACATTCCCTTGTAAGTTGCAAATGCGTATGTTCTCTGTTTATATGCTCTTAGTATGATATATGTTAGTTAGTGTTTCACGATCTAAAAACACTTGTGATTCAGATGTAATTAGTAAGCATTCCTTGTTTTGTGTTTACTTGTGTCTTGACTAAGCATGGTGGGTCAGGTCTACACAAAGCATCTGATTCGATGACTTACAGGAATCTTAATGTTTGTAGATTGGATAAATTTGGTGATTGGTGTAATTGTTTTTCCATAAACACAATGCAATCATTGTTTAGTGTTGTTAACATTTGCCCTGTGATTCTGACGCGAACCGAGAATACTGTACTGAGCCAAACATAGATTTTTGGTTTTCG
CDS Sequence
Protein Sequence