Gene Details:
- Gene ID: AT5G23070
- Gene Symbol: AtTK1b, TK1b, TK2
- Gene Name: thymidine kinase 1b
- Description: Thymidine kinase;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Germplasm Phenotype:
- tk1b-1 — Chlorotic seedlings.Mutants recover and accumulate more green pigment over time.
Function-related keywords:
Literature:
- MicroRNAs in plants. DOI: 10.1101/gad.1004402 ; PMID: 12101121
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry. DOI: 10.1093/pcp/pci033 ; PMID: 15695462
- Two thymidine kinases and one multisubstrate deoxyribonucleoside kinase salvage DNA precursors in Arabidopsis thaliana. DOI: 10.1111/j.1742-4658.2012.08747.x ; PMID: 22897443
- Chloroplast RNA-Binding Protein RBD1 Promotes Chilling Tolerance through 23S rRNA Processing in Arabidopsis. DOI: 10.1371/journal.pgen.1006027 ; PMID: 27138552
- The nucleotide metabolome of germinating Arabidopsis thaliana seeds reveals a central role for thymidine phosphorylation in chloroplast development. DOI: 10.1093/plcell/koac207 ; PMID: 35861422
Sequences:
cDNA Sequence
- >AT5G23070.1
TGATAATCAAAATATTTATTTTTAAAATAATATGTAAAGAAATCTGTTCAAAAATCACTCCAAAACTAGCTACCCATTAATACAAAAAAATTCAAAGAGTCGTTCCAATAGACCCCTTTTCCCAATAAACCCTAATTCCTTGCGGCTTCTTCTTCTTCCTCCTCCTCCATTCCTCTGTAATTATCAAATGTTTGGTGTTTCGATGAGAACATTAATCTCACCATCTCTTGCTCCCTTCTCTCTTCATCTCCATAAACCCTCTCTCTTCTCCACCGCTCTTCGCTTCTCCTTCTCAATCAACAACATAACCCCCACAAATTCACCTCCTTCCACCATTTCCACCAGAAAGCTACAAACGAAAGCGACGAGGGTAACATCATCATCATCATCTCAGCCGCTCTCCTCCTCATCTCCCGGCGAAATCCACGTCGTAGTCGGTCCAATGTTCTCCGGTAAAACAACAACACTTCTCCGCCGTATACTCGCCGAAAGAGAAACCGGTAAAAGAATCGCAATCATCAAATCCAACAAAGACACAAGATACTGCACCGAATCAATAGTTACTCACGACGGTGAGAAATACCCTTGCTGGTCACTCCCCGATCTCTCGTCCTTCAAAGAGAGATTCGGATTCGACGACTACGAGAATCGATTAGATGTGATTGGAATCGACGAAGCTCAATTCTTCGGAGATCTTTACGAGTTTTGCCGTGAAGCTGCTGATAAAGAGGGTAAAACTGTAATTGTTGCTGGATTGGATGGTGATTTTATGAGGAGGAGGTTTGGTTCGGTTCTTGATTTGATTCCGATTGCGGATACGGTTACGAAGCTGACGTCACGGTGTGAGGTTTGTGGGAAGAGAGCTTTGTTTACGATGAGGAAGACGGAGGAGAAAGAGACGGAGTTGATCGGTGGTGCTGAAGTTTATATGCCTGTGTGTAGGAGTCATTACGTTTGCGGTCAAAACGTTTTGGAAACCGCTCGTGCCGTTTTGGATTCAAGCAATAATCATAGTGTTGTAGCAAGTTCACTTTAGTTTGTAGGATTTGAGAGTGTTTAGATATTTGGTTTATTAGCTTTGAGATATTTGGAATTTTAAACATAATTATGTACTATTTAATCAATGATTTTAAGATAACACTCTTATTTGTGAATTTCTTGTAGAAACCCTTATATCGAAAAAATTT
CDS Sequence
Protein Sequence