Information report for AT5G22920
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0020003 — plant ovule — óvulo vegetal (Spanish, exact), 胚珠 (Japanese, exact), Poaceae ovule (narrow), Zea ovule (narrow)
Functional Keywords
Literature and News
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis. DOI: 10.1104/pp.104.052423 ; PMID: 15644464
- The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions. DOI: 10.1104/pp.105.068171 ; PMID: 16258011
- Enhanced tolerance to environmental stress in transgenic plants expressing the transcriptional coactivator multiprotein bridging factor 1c. DOI: 10.1104/pp.105.070110 ; PMID: 16244138
- Genetic analysis of Arabidopsis GATA transcription factor gene family reveals a nitrate-inducible member important for chlorophyll synthesis and glucose sensitivity. DOI: 10.1111/j.1365-313X.2005.02568.x ; PMID: 16262716
- Systemic signalling of environmental cues in Arabidopsis leaves. DOI: 10.1093/jxb/erj033 ; PMID: 16330523
- Large-scale analysis of mRNA translation states during sucrose starvation in arabidopsis cells identifies cell proliferation and chromatin structure as targets of translational control. DOI: 10.1104/pp.106.079418 ; PMID: 16632591
- Temporal responses of transcripts, enzyme activities and metabolites after adding sucrose to carbon-deprived Arabidopsis seedlings. DOI: 10.1111/j.1365-313X.2006.02979.x ; PMID: 17217462
- Identification of stress-tolerance-related transcription-factor genes via mini-scale Full-length cDNA Over-eXpressor (FOX) gene hunting system. DOI: 10.1016/j.bbrc.2007.09.124 ; PMID: 17937930
- Global transcript levels respond to small changes of the carbon status during progressive exhaustion of carbohydrates in Arabidopsis rosettes. DOI: 10.1104/pp.107.115592 ; PMID: 18305208
- Global identification of DELLA target genes during Arabidopsis flower development. DOI: 10.1104/pp.108.121301 ; PMID: 18502975
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Expression-based discovery of candidate ovule development regulators through transcriptional profiling of ovule mutants. DOI: 10.1186/1471-2229-9-29 ; PMID: 19291320
- Hexokinase 1 is required for glucose-induced repression of bZIP63, At5g22920, and BT2 in Arabidopsis. DOI: 10.3389/fpls.2015.00525 ; PMID: 26236323
- CHYR1 ubiquitinates the phosphorylated WRKY70 for degradation to balance immunity in Arabidopsis thaliana. DOI: 10.1111/nph.17231 ; PMID: 33492673
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Gene Resources
- UniProt: A0A1P8BAG6
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BAG6
- EnsemblPlants: AT5G22920.2
- Gramene: AT5G22920.2
- ExpressionAtlas: AT5G22920
- InterPro: IPR001841, IPR008913, IPR013083
- PANTHER: PTHR21319, PTHR21319:SF58
- SUPFAM: SSF161219, SSF161245, SSF57850
- PROSITE: PS50089, PS51266, PS51270
- Gene3D: 3.30.40.10
- SWISS-MODEL: A0A1P8BAG6
Sequences
cDNA Sequence
- >AT5G22920.2
TTAAAACCTTTTTAATAATGAGTATGGGATTTGTTGATTAGGCAAAATAAAAAATCTGGCGTGTTGCTGAGTCATCACTCATCTTCATATAAATAAATATCATCAACATGATTGCTTTTTCATCTCTGCAACTTCCTCTGTTTCTGATTACCAAACGTCGTCAATACATTTCTTCAAATTACGTTTCTTTTATTCTTTCGTTACTCTCAACAAATTTTGATATCTGATTGGTGTTGATTCCAAGTAAGAAAGATCAAAACTTTAGGTAAAGTATGGATATGGGTTTCCATGAAAATGAGCAAAATCAAGAATTTGCGAATCTAATGGAGATTGGATCTGGGCATTACGGGTGTTCACATTATAGAAGACGATGCAAGATTAGAGCACCATGTTGTGATGAGATTTTTGATTGCAGACATTGCCACAACGAAGCTAAGGATTCTCTTCATATTGAACAGCATCATAGACATGAGCTTCCTCGACATGAAGTTTCAAAGGTCATATGCTCGCTTTGTGAGACAGAACAAGACGTTCAGCAAAACTGCTCCAATTGTGGTGTATGTATGGGGAAGTACTTCTGTTCAAAATGCAAGTTCTTCGACGATGATCTTTCCAAGAAGCAATATCACTGTGATGAGTGTGGGATTTGCAGGACCGGAGGAGAAGAAAACTTTTTCCATTGCAAAAGATGCCGATGTTGCTACTCCAAAATTATGGAGGACAAACACCAATGTGTTGAAGGCGCTATGCATCACAATTGCCCGGTTTGTTTTGAGTATCTGTTTGATTCAACAAGAGATATCACTGTCCTACGATGTGGTCACACTATGCATCTAGAATGCACGAAAGATATGGGGCTACATAACCGATACACATGCCCTGTATGCTCCAAATCCATATGTGACATGTCTAATCTGTGGAAGAAACTTGATGAAGAGGTTGCTGCATACCCAATGCCAAAGATGTATGAAAACAAGATGGTAAACCAAAATTAAATTCGATATTTGATTCTCGTGTGTGTGTGTGTGTTTGTGTTATGTACACTTTCTGATTTGGATTTAAATGTGATGTGTTGAGTCAGGTATGGATTCTCTGCAATGACTGCGGCTCAAACACGAACGTTCGGTTTCATTTGATCGCGCATAAATGCAGTAGCTGTGGTTCCTACAATACAAGACAGACACAGAGAGGCTCTGATAGTCACTCTTGCTCCTCTGGAATGCCTCAGGTTGTTGGTTCAACCGGTTAATTTTTAACCAGAGCTGGTTTTGGTGTCTGAATTTCCCATGAGGAGATTATTTGTACTTTCTATAGTTTGGTATCAGTCAATGCCTTTGGTTGTTAACAATTATATCATCACAGATTCAAAAGCTGCTTTGAGCCAATCCAACTTGCAAGTCTAGACCATTATAGCCCAAAACAACCATATCTTGAAATAAATTATATATATTAATGTTTAAATAAGTAAAATTTTGGTAAAATCAGTATAAGAATGTACAAATATGC - >AT5G22920.1
TTAAAACCTTTTTAATAATGAGTATGGGATTTGTTGATTAGGCAAAATAAAAAATCTGGCGTGTTGCTGAGTCATCACTCATCTTCATATAAATAAATATCATCAACATGATTGCTTTTTCATCTCTGCAACTTCCTCTGTTTCTGATTACCAAACGTCGTCAATACATTTCTTCAAATTACGTTTCTTTTATTCTTTCGTTACTCTCAACAAATTTTGATATCTGATTGGTGTTGATTCCAAGTAAGAAAGATCAAAACTTTAGGTAAAGTATGGATATGGGTTTCCATGAAAATGAGCAAAATCAAGAATTTGCGAATCTAATGGAGATTGGATCTGGGCATTACGGGTGTTCACATTATAGAAGACGATGCAAGATTAGAGCACCATGTTGTGATGAGATTTTTGATTGCAGACATTGCCACAACGAAGCTAAGGATTCTCTTCATATTGAACAGCATCATAGACATGAGCTTCCTCGACATGAAGTTTCAAAGGTCATATGCTCGCTTTGTGAGACAGAACAAGACGTTCAGCAAAACTGCTCCAATTGTGGTGTATGTATGGGGAAGTACTTCTGTTCAAAATGCAAGTTCTTCGACGATGATCTTTCCAAGAAGCAATATCACTGTGATGAGTGTGGGATTTGCAGGACCGGAGGAGAAGAAAACTTTTTCCATTGCAAAAGATGCCGATGTTGCTACTCCAAAATTATGGAGGACAAACACCAATGTGTTGAAGGCGCTATGCATCACAATTGCCCGGTTTGTTTTGAGTATCTGTTTGATTCAACAAGAGATATCACTGTCCTACGATGTGGTCACACTATGCATCTAGAATGCACGAAAGATATGGGGCTACATAACCGATACACATGCCCTGTATGCTCCAAATCCATATGTGACATGTCTAATCTGTGGAAGAAACTTGATGAAGAGGTTGCTGCATACCCAATGCCAAAGATGTATGAAAACAAGATGGTAAACCAAAATTAAATTCGATATTTGATTCTCGTGTGTGTGTGTGTGTTTGTGTTATGTACACTTTCTGATTTGGATTTAAATGTGATGTGTTGAGTCAGGTATGGATTCTCTGCAATGACTGCGGCTCAAACACGAACGTTCGGTTTCATTTGATCGCGCATAAATGCAGTAGCTGTGGTTCCTACAATACAAGACAGACACAGAGAGGCTCTGATAGTCACTCTTGCTCCTCTGGAATGCCTCAGGTTGTTGGTTCAACCGGTTAATTTTTAACCAGAGCTGGTTTTGGTGTCTGAATTTCCCATGAGGAGATTATTTGTACTTTCTATAGTTTGGTATCAGTCAATGCCTTTGGTTGTTAACAATTATATCATCACAGATTCAAAAGCTGCTTTGAGCCAATCCAACTTGCAAGTCTAGACCATTATAGCCCAAAACAACCATATCTTGAAATAAATTATATATATTAATGTTTAAATAAGTAAAATTTTGGTAAAATCAGTATAAGAATGTACAAATATGC
CDS Sequence
Protein Sequence