Information report for AT5G22750
Gene Details
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Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- hrq1-1 rad5A-2 — Significant hypersensitivity against cisplatin and MMC.
- rad5A-2 — Strong sensitivity against both cisplatin and MMC.
Functional Keywords
Literature and News
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Components of nucleotide excision repair and DNA damage tolerance in Arabidopsis thaliana. DOI: 10.1002/em.20094 ; PMID: 15645454
- Genome-wide identification of potential plant E2F target genes. DOI: 10.1104/pp.105.066290 ; PMID: 16126853
- A transcriptome-based characterization of habituation in plant tissue culture. DOI: 10.1104/pp.105.076059 ; PMID: 16489130
- A homolog of ScRAD5 is involved in DNA repair and homologous recombination in Arabidopsis. DOI: 10.1104/pp.108.116806 ; PMID: 18310306
- RAD5A, RECQ4A, and MUS81 have specific functions in homologous recombination and define different pathways of DNA repair in Arabidopsis thaliana. DOI: 10.1105/tpc.110.078568 ; PMID: 20971895
- RAD5a and REV3 function in two alternative pathways of DNA-damage tolerance in Arabidopsis. DOI: 10.1016/j.dnarep.2011.04.009 ; PMID: 21549648
- The nuclease FAN1 is involved in DNA crosslink repair in Arabidopsis thaliana independently of the nuclease MUS81. DOI: 10.1093/nar/gkv208 ; PMID: 25779053
- The Translesion Polymerase ζ Has Roles Dependent on and Independent of the Nuclease MUS81 and the Helicase RECQ4A in DNA Damage Repair in Arabidopsis. DOI: 10.1104/pp.15.00806 ; PMID: 26474640
- The DNA translocase RAD5A acts independently of the other main DNA repair pathways, and requires both its ATPase and RING domain for activity in Arabidopsis thaliana. DOI: 10.1111/tpj.13602 ; PMID: 28509359
- The RecQ-like helicase HRQ1 is involved in DNA crosslink repair in Arabidopsis in a common pathway with the Fanconi anemia-associated nuclease FAN1 and the postreplicative repair ATPase RAD5A. DOI: 10.1111/nph.15109 ; PMID: 29577315
- Genetic analysis of DNA-damage tolerance pathways in Arabidopsis. DOI: 10.1007/s00299-022-02942-2 ; PMID: 36319861
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Gene Resources
- UniProt: A0A7G2F9F0
- EMBL: LR881470
- AlphaFoldDB: A0A7G2F9F0
- EnsemblPlants: AT5G22750.1
- Gramene: AT5G22750.1
- KEGG: ath:AT5G22750
- Orthologous matrix: KVEPWSN
- ExpressionAtlas: AT5G22750
- InterPro: IPR000330, IPR001650, IPR001841
- PANTHER: PTHR45626, PTHR45626:SF45
- SUPFAM: SSF52540, SSF57850
- PROSITE: PS00518, PS50089, PS51192
- Gene3D: 3.30.40.10, 3.40.50.10810, 3.40.50.300
- SWISS-MODEL: A0A7G2F9F0
- Conserved Domain Database: cd18008, cd18793
Sequences
cDNA Sequence
- >AT5G22750.1
TTGAATAAAAAAAACAATATAATGGCGGGAATTTGAGAGACTCGTCGCTAATTTACGCGCGTTTCTCGGGTCCGGCAGATTTCGTACGCCGTCGTCGTCGATCTACTTCAATTTCTATAATTCGCCACTGTACTACATTGGGGTTTTCTTTTTCCGGCGTTCTTTAGCCACAAGCTCACTGAATTTTCAGTAAAGTTTCAAAATTTCCCTGGAAAATTGTAGGATTAGGGTTTTGGAAATGGGAACGAAAGTCTCAGACGATCTTGTTTCCACCGTCAGATCAGTCGTGGGTTCCGATTACTCAGATATGGATATAATCAGGGCTTTACACATGGCGAATCATGATCCAACGGCTGCTATCAATATAATCTTCGACACTCCAAGTTTCGCCAAACCTGATGTAGCCACTCCTACCCCGAGCGGCTCTAATGGAGGGAAGCGAGTTGATAGTGGATTAAAGGGCTGTACTTTTGGTGACAGCGGAAGTGTTGGAGCGAATCATCGCGTGGAGGAAGAAAATGAGAGTGTTAATGGTGGAGGAGAAGAGAGTGTTTCAGGGAATGAGTGGTGGTTTGTTGGTTGTTCTGAATTGGCTGGGTTATCGACATGTAAAGGAAGGAAATTGAAGTCTGGTGATGAATTGGTGTTCACGTTTCCGCATAGTAAAGGATTAAAGCCTGAGACTACGCCTGGGAAGCGCGGTTTTGGGCGGGGAAGGCCAGCTTTGCGTGGTGCTTCTGATATCGTTAGGTTCTCTACAAAGGATTCAGGAGAGATTGGTAGAATACCAAACGAGTGGGCTCGGTGTCTTCTACCACTTGTGAGAGACAAGAAAATTAGGATAGAAGGCAGTTGCAAGTCGGCGCCTGAAGCTTTGAGCATCATGGATACAATTCTTCTGTCTGTAAGCGTGTACATTAATAGTTCCATGTTTCAAAAGCATAGTGCGACTTCATTTAAGACAGCTAGTAATACGGCAGAGGAATCAATGTTCCATCCTCTCCCAAATCTCTTTCGGTTACTCGGTTTGATCCCCTTTAAGAAGGCAGAGTTTACTCCAGAGGATTTTTACTCTAAGAAGCGACCTTTGAGTTCCAAGGATGGTTCTGCTATTCCTACTTCGTTGCTTCAATTAAACAAGGTCAAGAATATGAATCAAGATGCAAACGGAGATGAAAATGAGCAGTGTATCAGCGATGGTGATCTTGATAACATTGTTGGTGTTGGGGACAGTTCTGGATTAAAGGAAATGGAAACTCCACATACACTTCTGTGTGAGCTTCGTCCATACCAAAAGCAGGCACTTCATTGGATGACCCAACTGGAGAAAGGAAATTGCACTGATGAGGCAGCAACAATGCTTCACCCGTGTTGGGAAGCATACTGTTTAGCAGACAAGAGGGAACTGGTTGTCTACCTGAATTCTTTTACTGGTGATGCTACAATACACTTCCCTAGCACACTTCAAATGGCAAGAGGAGGAATATTAGCAGACGCAATGGGTCTTGGAAAGACTGTAATGACCATATCCCTTTTGCTTGCCCATTCTTGGAAAGCTGCATCAACTGGGTTTCTATGCCCCAACTATGAAGGAGACAAAGTGATCAGCAGTTCTGTAGATGATCTCACTAGTCCCCCGGTGAAGGCAACCAAATTTCTAGGCTTTGATAAGAGGCTTCTTGAACAAAAAAGTGTACTTCAAAATGGTGGTAACCTGATTGTATGTCCGATGACACTTTTAGGACAGTGGAAGACAGAGATTGAAATGCATGCAAAGCCTGGGTCTCTATCTGTCTATGTTCACTATGGGCAAAGCAGGCCGAAGGATGCAAAACTTCTTTCCCAGAGTGATGTGGTAATCACCACATATGGAGTTCTAACATCCGAATTCTCGCAAGAGAACTCAGCAGACCATGAAGGAATTTATGCAGTTCGATGGTTTAGGATTGTTCTTGACGAGGCACATACCATCAAAAACTCAAAAAGCCAAATTTCCTTGGCTGCTGCAGCTCTGGTTGCTGATAGGCGTTGGTGTCTTACGGGTACTCCTATTCAGAACAATCTGGAGGATTTATACAGCCTTCTACGGTTTTTGAGGATTGAACCATGGGGAACTTGGGCATGGTGGAATAAACTTGTCCAAAAGCCATTTGAAGAGGGTGATGAGAGAGGGTTAAAGCTAGTGCAGTCTATCTTAAAACCTATCATGCTTAGGAGAACAAAGTCTAGCACAGACCGAGAAGGAAGGCCGATTCTTGTTCTACCCCCTGCTGATGCACGGGTCATTTACTGTGAACTTTCGGAGTCTGAGAGGGATTTCTACGACGCGCTATTTAAAAGATCCAAGGTCAAATTTGATCAATTTGTTGAACAAGGCAAAGTTCTTCATAACTATGCTTCGATCCTGGAACTGCTTTTGCGTCTTCGACAATGTTGTGATCACCCATTTTTAGTAATGAGTCGAGGGGATACAGCGGAATACTCTGATCTGAATAAGCTTTCTAAACGTTTCCTTAGTGGAAAGTCTTCTGGCTTAGAAAGGGAAGGAAAAGATGTACCGTCAGAGGCTTTTGTTCAGGAGGTGGTAGAGGAACTGCGCAAAGGAGAGCAAGGAGAGTGTCCAATATGCCTTGAAGCACTTGAGGATGCTGTATTAACGCCATGTGCTCATAGATTATGTCGTGAGTGTCTCTTGGCAAGTTGGAGAAATTCTACTTCTGGGTTATGTCCTGTGTGTAGGAACACTGTAAGCAAACAAGAACTCATCACAGCACCAACCGAAAGTAGATTCCAGGTTGACGTGGAAAAGAATTGGGTGGAATCATCGAAAATCACTGCTCTTCTGGAAGAGCTTGAAGGTCTTCGTTCTTCAGGCTCTAAGAGCATTCTCTTTAGCCAGTGGACCGCTTTCCTCGATCTCCTCCAAATTCCCCTCTCTCGGAATAACTTTTCATTTGTCCGTCTTGATGGCACGCTAAGTCAGCAGCAACGAGAGAAGGTCCTTAAAGAATTTTCCGAAGATGGCAGTATCCTGGTACTGTTGATGTCTCTAAAAGCTGGTGGCGTTGGGATAAATCTAACAGCTGCGTCCAATGCTTTTGTCATGGATCCATGGTGGAACCCAGCGGTAGAGGAACAAGCTGTTATGCGTATTCATCGTATAGGGCAAACTAAGGAAGTCAAAATCAGAAGATTCATCGTTAAGGGAACGGTTGAAGAGAGAATGGAGGCGGTTCAGGCGAGGAAGCAGAGAATGATCTCTGGGGCTTTAACCGATCAAGAAGTACGAAGTGCACGTATAGAGGAACTCAAGATGTTATTTACCTGAAACTATAGAAACTGTTCTCAAGCCTGAAGTCGATCATACAATTCTACATATATGGGAAACTTGTCACACTATATGCAAGGAGAATCAGAGATTATAACGCATCTAAAAACGGGTTTTGTTCTTTTCAAGAGATATGATGGACAATTGTCACAGTTTTGGGGAATGTGCAGTGAGAGTTCCCAAGTGTACCATAAGCCTATCTGGGTTTTGTTGTTTTGTAATGGAAATCAGATTGTTTTTTGTACTTTTTCATTTATAATGAACTGTAACTTTATACTATTATATAGTTAACTCAATATGACAAATTTGCACAGTGAAAAGGCTTAAGGATTACTTT
CDS Sequence
Protein Sequence