Information report for AT5G22500
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Coordinated transcriptional regulation underlying the circadian clock in Arabidopsis. DOI: 10.1038/ncb2219 ; PMID: 21499259
- SHINE transcription factors act redundantly to pattern the archetypal surface of Arabidopsis flower organs. DOI: 10.1371/journal.pgen.1001388 ; PMID: 21637781
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- FAR-RED ELONGATED HYPOCOTYL3 and FAR-RED IMPAIRED RESPONSE1 transcription factors integrate light and abscisic acid signaling in Arabidopsis. DOI: 10.1104/pp.113.224386 ; PMID: 23946351
- FHY3 and FAR1 Act Downstream of Light Stable Phytochromes. DOI: 10.3389/fpls.2016.00175 ; PMID: 26941752
- Arabidopsis thaliana FAR-RED ELONGATED HYPOCOTYLS3 (FHY3) and FAR-RED-IMPAIRED RESPONSE1 (FAR1) modulate starch synthesis in response to light and sugar. DOI: 10.1111/nph.14300 ; PMID: 27859295
- Root Suberin Plays Important Roles in Reducing Water Loss and Sodium Uptake in Arabidopsis thaliana. DOI: 10.3390/metabo11110735 ; PMID: 34822393
- Disruption of the ABA1 encoding zeaxanthin epoxidase caused defective suberin layers in Arabidopsis seed coats. DOI: 10.3389/fpls.2023.1156356 ; PMID: 37008500
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A1P8BDD4
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BDD4
- EnsemblPlants: AT5G22500.2
- Gramene: AT5G22500.2
- Orthologous matrix: HDTAARY
- ExpressionAtlas: AT5G22500
- InterPro: IPR013120, IPR026055, IPR036291
- PANTHER: PTHR11011, PTHR11011:SF109
- SUPFAM: SSF51735
- Gene3D: 3.40.50.720
- SWISS-MODEL: A0A1P8BDD4
- Conserved Domain Database: cd05236
Sequences
cDNA Sequence
- >AT5G22500.2
ACGTGACTCAATAAAATCAAGTCTTTTGTTTCCTTTTATCCAAAAAAAAAAAAAAGTCTTGTGTTTCTCTTAGGTTGGTTGAGAATCATTTCATTTCAATGGAATCCAATTGTGTTCAATTTCTCGGTAACAAGACCATTCTCATCACAGGAGCTCCTGGTTTTCTTGCCAAGGTTTTGGTAGAGAAAATACTAAGGTTGCAACCAAATGTGAAGAAGATATACCTTCTGTTGAGAGCTCCCGACGAAAAATCAGCCATGCAACGCCTACGTAGTGAGGTTATGGAGATCGACCTTTTTAAAGTGTTGAGGAACAATCTAGGAGAAGACAATTTGAATGCCTTGATGCGGGAAAAAATTGTGCCGGTTCCAGGTGATATATCGATCGATAATTTGGGATTGAAAGACACTGATCTCATACAACGTATGTGGAGTGAGATTGATATCATAATCAACATAGCAGCCACAACAAATTTCGATGAAAGATATGATATTGGTCTTGGCATCAACACATTTGGAGCCCTGAATGTTCTCAACTTCGCCAAAAAGTGTGTTAAAGGACAATTGCTTCTCCATGTCTCAACCGCGTATATAAGCGGTGAACAACCTGGATTGTTACTAGAGAAACCATTCAAGATGGGGGAGACTCTCAGCGGGGATCGGGAACTAGACATCAATATAGAACATGATCTAATGAAACAAAAATTGAAAGAGCTTCAAGATTGTTCTGATGAAGAGATCTCGCAAACAATGAAAGATTTTGGAATGGCAAGGGCAAAGCTTCATGGATGGCCAAATACATATGTATTCACCAAAGCAATGGGAGAGATGCTAATGGGAAAATACAGAGAAAATTTGCCACTTGTTATCATACGTCCAACAATGATTACTAGTACTATTGCCGAACCATTCCCCGGTTGGATTGAAGGGTTGAAAACATTAGACAGTGTGATTGTTGCATATGGTAAAGGAAGGCTTAAATGTTTTCTTGCGGATTCAAACTCAGTCTTTGACCTTATACCGGCAGACATGGTAGTAAATGCGATGGTTGCAGCCGCGACAGCTCATTCGGGAGACACCGGGATTCAGGCAATATATCATGTTGGTTCGTCTTGTAAGAATCCAGTCACGTTTGGACAACTTCACGATTTCACGGCTCGTTACTTCGCTAAACGTCCTTTGATTGGTCGGAATGGCTCGCCAATCATAGTGGTCAAAGGAACCATTCTGTCCACTATGGCTCAATTCAGCCTCTACATGACCCTTCGTTACAAGCTTCCTCTACAGGTACCTTAACATTATAATTTATGTTCTATTTTCATTTCGTTTCCCAACTTTTAAACTTCCAAGAAACCCTAAATTTTGGTTCAGTTTTTACGCACATCTATAAAAGACTAAGGCTGTAAATGGTAACCAAAACCGCACCCAAAACCGCACCGCAACAGTGTTGTAACAATATCAAAATCTCTACATATACATATATATATATATATATATGTATTTTCGTTACTATTTAAACCGCACCGCACTTCTCCCGCACCATAAAACGCAGTCACTATTCAGAACCTAAGAATAATATTCAACATATATGTTGCTTTTTTTGTTACCTTTATGTTTCTCATTTGTTTTTGTTTTCTTTTCCCTTCCAGATACTTCGATTGATCAATATAGTTTATCCATGGAGTCACGGAGATAACTACAGTGACCTAAGCCGCAAAATCAAGCTAGCTATGCGACTAGTTGAGCTTTACCAGCCTTACTTACTCTTCAAGGGCATATTTGATGATTTAAATACCGAAAGACTGCGAATGAAAAGAAAGGAGAATATCAAAGAGTTAGATGGATCGTTCGAGTTCGATCCCAAGTCCATTGATTGGGACAATTATATCACAAACACCCACATTCCTGGCCTCATCACCCATGTGCTTAAACAATAAATTATGCTGGTAATATGTTTGGAACTATTGTGAATCTCGTGTGTAATATTATTAAAGAATACGATTATATCATTCTAATCTTGTAATTTACAGTTTGTGTTGGCGTGTAATATCAAAATAAATAAAAAAAACTTATTCCACAATGGATAAGACTTTGAATCATGCATATGATATTCAGTCGTGTTATAAATATATTTTTATGTCACCATCTTACATA - >AT5G22500.1
ACGTGACTCAATAAAATCAAGTCTTTTGTTTCCTTTTATCCAAAAAAAAAAAAAAGTCTTGTGTTTCTCTTAGGTTGGTTGAGAATCATTTCATTTCAATGGAATCCAATTGTGTTCAATTTCTCGGTAACAAGACCATTCTCATCACAGGAGCTCCTGGTTTTCTTGCCAAGGTTTTGGTAGAGAAAATACTAAGGTTGCAACCAAATGTGAAGAAGATATACCTTCTGTTGAGAGCTCCCGACGAAAAATCAGCCATGCAACGCCTACGTAGTGAGGTTATGGAGATCGACCTTTTTAAAGTGTTGAGGAACAATCTAGGAGAAGACAATTTGAATGCCTTGATGCGGGAAAAAATTGTGCCGGTTCCAGGTGATATATCGATCGATAATTTGGGATTGAAAGACACTGATCTCATACAACGTATGTGGAGTGAGATTGATATCATAATCAACATAGCAGCCACAACAAATTTCGATGAAAGATATGATATTGGTCTTGGCATCAACACATTTGGAGCCCTGAATGTTCTCAACTTCGCCAAAAAGTGTGTTAAAGGACAATTGCTTCTCCATGTCTCAACCGCGTATATAAGCGGTGAACAACCTGGATTGTTACTAGAGAAACCATTCAAGATGGGGGAGACTCTCAGCGGGGATCGGGAACTAGACATCAATATAGAACATGATCTAATGAAACAAAAATTGAAAGAGCTTCAAGATTGTTCTGATGAAGAGATCTCGCAAACAATGAAAGATTTTGGAATGGCAAGGGCAAAGCTTCATGGATGGCCAAATACATATGTATTCACCAAAGCAATGGGAGAGATGCTAATGGGAAAATACAGAGAAAATTTGCCACTTGTTATCATACGTCCAACAATGATTACTAGTACTATTGCCGAACCATTCCCCGGTTGGATTGAAGGGTTGAAAACATTAGACAGTGTGATTGTTGCATATGGTAAAGGAAGGCTTAAATGTTTTCTTGCGGATTCAAACTCAGTCTTTGACCTTATACCGGCAGACATGGTAGTAAATGCGATGGTTGCAGCCGCGACAGCTCATTCGGGAGACACCGGGATTCAGGCAATATATCATGTTGGTTCGTCTTGTAAGAATCCAGTCACGTTTGGACAACTTCACGATTTCACGGCTCGTTACTTCGCTAAACGTCCTTTGATTGGTCGGAATGGCTCGCCAATCATAGTGGTCAAAGGAACCATTCTGTCCACTATGGCTCAATTCAGCCTCTACATGACCCTTCGTTACAAGCTTCCTCTACAGGTACCTTAACATTATAATTTATGTTCTATTTTCATTTCGTTTCCCAACTTTTAAACTTCCAAGAAACCCTAAATTTTGGTTCAGTTTTTACGCACATCTATAAAAGACTAAGGCTGTAAATGGTAACCAAAACCGCACCCAAAACCGCACCGCAACAGTGTTGTAACAATATCAAAATCTCTACATATACATATATATATATATATATATGTATTTTCGTTACTATTTAAACCGCACCGCACTTCTCCCGCACCATAAAACGCAGTCACTATTCAGAACCTAAGAATAATATTCAACATATATGTTGCTTTTTTTGTTACCTTTATGTTTCTCATTTGTTTTTGTTTTCTTTTCCCTTCCAGATACTTCGATTGATCAATATAGTTTATCCATGGAGTCACGGAGATAACTACAGTGACCTAAGCCGCAAAATCAAGCTAGCTATGCGACTAGTTGAGCTTTACCAGCCTTACTTACTCTTCAAGGGCATATTTGATGATTTAAATACCGAAAGACTGCGAATGAAAAGAAAGGAGAATATCAAAGAGTTAGATGGATCGTTCGAGTTCGATCCCAAGTCCATTGATTGGGACAATTATATCACAAACACCCACATTCCTGGCCTCATCACCCATGTGCTTAAACAATAAATTATGCTGGTAATATGTTTGGAACTATTGTGAATCTCGTGTGTAATATTATTAAAGAATACGATTATATCATTCTAATCTTGTAATTTACAGTTTGTGTTGGCGTGTAATATCAAAATAAATAAAAAAAACTTATTCCACAATGGATAAGACTTTGAATCATGCATATGATATTCAGTCGTGTTATAAATATATTTTTATGTCACCATCTTACATA
CDS Sequence
Protein Sequence