Information report for AT5G22440
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Transcriptome analysis of sulfur depletion in Arabidopsis thaliana: interlacing of biosynthetic pathways provides response specificity. DOI: 10.1046/j.1365-313x.2003.01657.x ; PMID: 12609038
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
Gene Resources
- UniProt: A0A178UDV5
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A178UDV5
- EnsemblPlants: AT5G22440.1, AT5G22440.2
- Gramene: AT5G22440.1, AT5G22440.2
- KEGG: ath:AT5G22440
- Orthologous matrix: CTHNEAL
- ExpressionAtlas: AT5G22440
- InterPro: IPR002143, IPR016095, IPR023673
- PANTHER: PTHR23105
- SUPFAM: SSF56808
- PROSITE: PS01199
- Gene3D: 3.30.190.20, 3.40.50.790
- OrthoDB: A0A178UDV5
- SWISS-MODEL: A0A178UDV5
- Conserved Domain Database: cd00403
Sequences
cDNA Sequence
- >AT5G22440.2
CTTTCTCTGTTTCCGACCTTCCCACAGGTAAATCAATCATCTTCTTCAATACTTTTGTCTTTCCGTCCATCGGAGGATTCTCAATACGTTTCGTTACAACACTGTTAAATCTCATTTTCCTGAATCTCCGTTTACAGGAAGCAAATTTGTTTCAGGGAGTACCAAAATGAGTAAGCTTCAGAGTGAAGCCGTGAGAGAGGCAATAAGCTCCATTATCACTCACTGTAAGGAGACAAAGCCACGCAACTTCACTGAGACTATTGAACTCCAGATTGGTCTCAAGAACTATGACCCTCAAAAGGACAAGAGATTTAGCGGTTCTGTGAAATTGCCTCACGTTCCTAGGCCAAAGATGAAGATTTGCATGCTTGGTGATGCCCAGCACGTCGAAGAGGCTGAGAAGATTGGATTGGAATCTATGGATGTTGAAGCTCTTAAGAAGTTGAACAAGAACAAGAAACTTGTTAAGAAGCTTGCTAAGAAATTCCATGCTTTCCTTGCTTCTGAATCTGTCATTAAGCAGATTCCTCGTCTTCTTGGTCCTGGTCTCAACAAGGCAGGAAAATTCCCAACTCTTGTTAGCCACCAAGAGTCTTTGGAATCCAAAGTGAATGAGACAAAGGCAACAGTGAAGTTCCAGCTCAAGAAGGTTCTATGTATGGGAGTTGCTGTCGGTAATCTTTCCATGGAGGAGAAGCAGATCTTTCAAAATGTTCAGATGAGTGTTAACTTCCTCGTTTCTCTCTTGAAGAAAAACTGGCAAAATGTGAGGTGCTTGTACTTGAAGAGCACAATGGGTCCACCAAACCGAGTTTTCTAAGGTTATTATTATTACAAAGTTTCTCTAAGGTATCATCACTCTTTAGGAAATTTGATTTTCTTTTGCTGTCATGAGCCTTCTTCTTGTTGGGTTAAACTTCAAATTCCAGTATCCCGACTTTTGTAGGATCAAGATTTTTTTTAAAGACAATTTTGTTTCTTTTGTTGCTATTATTATTAGTGGATTTTTTCTCCATTTAAGCACTCAAATTTTGCTATCTTTGTTATCATCAATATCATTTAAGTTTGTCTT - >AT5G22440.1
CTTTCTCTGTTTCCGACCTTCCCACAGGTAAATCAATCATCTTCTTCAATACTTTTGTCTTTCCGTCCATCGGAGGATTCTCAATACGTTTCGTTACAACACTGTTAAATCTCATTTTCCTGAATCTCCGTTTACAGGAAGCAAATTTGTTTCAGGGAGTACCAAAATGAGTAAGCTTCAGAGTGAAGCCGTGAGAGAGGCAATAAGCTCCATTATCACTCACTGTAAGGAGACAAAGCCACGCAACTTCACTGAGACTATTGAACTCCAGATTGGTCTCAAGAACTATGACCCTCAAAAGGACAAGAGATTTAGCGGTTCTGTGAAATTGCCTCACGTTCCTAGGCCAAAGATGAAGATTTGCATGCTTGGTGATGCCCAGCACGTCGAAGAGGCTGAGAAGATTGGATTGGAATCTATGGATGTTGAAGCTCTTAAGAAGTTGAACAAGAACAAGAAACTTGTTAAGAAGCTTGCTAAGAAATTCCATGCTTTCCTTGCTTCTGAATCTGTCATTAAGCAGATTCCTCGTCTTCTTGGTCCTGGTCTCAACAAGGCAGGAAAATTCCCAACTCTTGTTAGCCACCAAGAGTCTTTGGAATCCAAAGTGAATGAGACAAAGGCAACAGTGAAGTTCCAGCTCAAGAAGGTTCTATGTATGGGAGTTGCTGTCGGTAATCTTTCCATGGAGGAGAAGCAGATCTTTCAAAATGTTCAGATGAGTGTTAACTTCCTCGTTTCTCTCTTGAAGAAAAACTGGCAAAATGTGAGGTGCTTGTACTTGAAGAGCACAATGGGTCCACCAAACCGAGTTTTCTAAGGTTATTATTATTACAAAGTTTCTCTAAGGTATCATCACTCTTTAGGAAATTTGATTTTCTTTTGCTGTCATGAGCCTTCTTCTTGTTGGGTTAAACTTCAAATTCCAGTATCCCGACTTTTGTAGGATCAAGATTTTTTTTAAAGACAATTTTGTTTCTTTTGTTGCTATTATTATTAGTGGATTTTTTCTCCATTTAAGCACTCAAATTTTGCTATCTTTGTTATCATCAATATCATTTAAGTTTGTCTT
CDS Sequence
Protein Sequence