Information report for AT5G22030
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development. DOI: 10.1111/j.1365-313X.2005.02575.x ; PMID: 16359384
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- Functional characterization of the Arabidopsis ubiquitin-specific protease gene family reveals specific role and redundancy of individual members in development. DOI: 10.1111/j.1365-313X.2008.03557.x ; PMID: 18485060
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- UBIQUITIN-SPECIFIC PROTEASES function in plant development and stress responses. DOI: 10.1007/s11103-017-0633-5 ; PMID: 28695315
Gene Resources
- UniProt: A0A178UPQ0
- EMBL: CACRSJ010000110, LUHQ01000005
- AlphaFoldDB: A0A178UPQ0
- EnsemblPlants: AT5G22030.1
- Gramene: AT5G22030.1
- KEGG: ath:AT5G22030
- Orthologous matrix: KQQHSPN
- ExpressionAtlas: AT5G22030
- InterPro: IPR001394, IPR018200, IPR028889
- PANTHER: PTHR21646, PTHR21646:SF24
- SUPFAM: SSF54001
- PROSITE: PS00972, PS00973, PS50235
- Gene3D: 3.30.2230.10, 3.90.70.10
- SWISS-MODEL: A0A178UPQ0
- Conserved Domain Database: cd02674
Sequences
cDNA Sequence
- >AT5G22030.1
ATGAACGGGACATCGCCCGACGAATCTCCCGATTCGACAACTCAGCGGATCGATTCGTTCAACGGCGAGCAGAGAGTCTACTTCGTTCCCTTGAGGTGGTGGAAAGATGCGCAAGATTCAATGCCTTCTGAATCAGTTGAAAAAAGAGAGATCTTGTATACAGCAAGTTGCGGGTCGTCTTATGGAGGCCCAATGAAGTTGATAAATAACATTTTTAACTCTGATATTTTGTTCGATCTGAGGAGAGAAGGAGATGCGTTACAGAATGGTGAAACGGGAGAAGCAAGCGTCTCAGGCAGGGACTTTGCTTTGGTCTCAAGTGATATGTGGCTGCAGGCACTAAAATGGTATCATGATGATAAAAATACTGAGAAAGGCGTAAAAAGTTTCTCGGCTGGAGGAGTTGACAGAGGTGATGTTTATCCTGTACAACTCAGGCTCTCCGTTTTGCAGGAAACCAATTCATTGGCGGTCAAAATTTGCAAAAAGGACAATTCAGTTGAATGCTTCAGAAGAGCATGCAAGATATTCAGTTTGGATTCTGAGCAGTTGCGCATTTGGGATATTTCTGGCCAAACAACCTTGTTTTTCGAAAGTGATGTGAGCAATTCCAAGGATTGTCAACAACAAGCAGATCAGGAAATCCTCCTAGAGCTGCAGATTTATGGATTATCAGACTCCATCAAATTGAAGGAATCAAAAAAAGAAGATGGTTCCACACAGCAAACCAATGGGATTACCAATGGCATGAATGGTGGCACAGTGTTCAGATTTGGACGAAGTAATTCTTTGAGCTTTTTGGGTAAAGCTGGAGAAGCTGGAACTTTGGGGTTGACAGGCTTGCAGAATCTAGGAAACACTTGTTTCATGAACAGTTCCCTTCAGTGCTTGGCTCACACACCGAAGCTTGTCGACTTCTTTCTTGGCGAGTACAGTAAAGAAATAAATCTTGACAATCCATTGGGAATGAAAGGTGAGATCGCCTTAGCTTTTGGTGACTTGTTAAGGAGTCTGTGGGCTCCAGGTGCATCAACAGTGGCCCCAAGGACATTTAAAGCAAAACTTGCTCGCTTTGCTCCTCAGTTTAGTGGCTTTAATCAGCATGATTCGCAGGAGCTTCTAGCTTTCTTGCTGGATGGACTCCACGAGGACTTAAACCGTGTAAAGAACAAGCCTTACGTGGAAGCAAAAGATGGAGATGGCCGTCCAGACGCAGAAGTGGCTGATGAATATTGGCGAAATCATGTGGCTCGCAATGATTCAATAATTGTTGATGTGTGCCAAGGCCAATACAAGTCAACATTAGTTTGTCCTATTTGCAAAAAGGTTTCTGTTATGTTTGATCCGTTCATGTACCTATCGCTACCATTGCCATGCACATCAATGCGAACAATGGATTTAACAGTCATGAGTGCCGATGGGAGTAGTTTGCCTATTCCATTGACTGTCAACGTTCCTAAGTTTGGAAAATTTGAAGATCTTCATAAGGCTCTTGTCACTGCCTGTTCTTTACCAGAGGAGGAGACTTTATTGGTTACTGAGGTATACAACAATCGGATTATTCGCTTCCTGGAGGAGCCTACTGATTCATTAACCTTGATCAGAGATGGTGACAAACTTGTCGTGTATCGGTTAAAGAAGGATGCAAACAATTCTCCTTTAATTGTGTATATGCATCAGAAGCTGGAAGAGCAGTTTATATCTGGGAAATCTAGCCCAACTTGGAAGGCATTTGGAATCCCCTTGGTCTCAAGGCTTTGTGATGTCGAGAATGGATCTGATGTCGAGAACCTGTACCTGAAGCTGCTTAGTTCATTTAAGATGCCTACTGAATTCTTTACAGAGAATCTTGAAAACCCAACTGAAGAAGAAGCCACTGATAAAACAGATACCGATGGTACTACTTCAGTTGAGGATACAAATTCCACTGATGTGAAGGAGACTACTGAATCTCTTCCAGATCCTGTGTTGAGGCTTTACCTCACCGACGACAGAGGAAACTCGATAGAAGCTGAAATGTTGAAAGAAAAGCCTGTAAATAAATCCAAGCGGTTGAATGTGCTTGCACGTTGGCCTGTAAAAGAGCTTGACGTTTATGATACTTGTCTTCTGAGCTCCTTACCTGAGGTTTCCAAATCTGGAACTAAGAGACCCCAAGAATCCGTTTCGCTTTTCAAGTGCCTTGAAGCATTCTTGACGGAGGAGCCTCTTGGTCCTGATGACATGTGGTATTGTCCTGGGTGCAAAGAACACCGGCAAGCCATTAAAAAGTTAGATCTCTGGAGGTTGCCAGAGATCCTGGTTATTCATCTGAAGAGGTTTTCGTATAGCCGGTTTATGAAGAACAAGCTGGAGGCATATGTGGATTTCCCGCTAGATAATCTTGATCTATCAAGCTACATCTCCTACAAGAATGGTCAGACAACATATCGTTACATGCTCTATGCGATTAGCAATCACTATGGGAGCATGGGAGGTGGTCATTACACTGCATATGTTCACCATGGAGGTGATCGATGGTATGACTTTGATGATAGCCATGTCCACCAAATCAGCCAAGAAAAGATCAAGACCTCGGCTGCTTACGTTCTGTTCTATAAACGCCTTGTAGACTAA - >AT5G22030.2
ATGAACGGGACATCGCCCGACGAATCTCCCGATTCGACAACTCAGCGGATCGATTCGTTCAACGGCGAGCAGAGAGTCTACTTCGTTCCCTTGAGGTGGTGGAAAGATGCGCAAGATTCAATGCCTTCTGAATCAGTTGAAAAAAGAGAGATCTTGTATACAGCAAGTTGCGGGTCGTCTTATGGAGGCCCAATGAAGTTGATAAATAACATTTTTAACTCTGATATTTTGTTCGATCTGAGGAGAGAAGGAGATGCGTTACAGAATGGTGAAACGGGAGAAGCAAGCGTCTCAGGCAGGGACTTTGCTTTGGTCTCAAGTGATATGTGGCTGCAGGCACTAAAATGGTATCATGATGATAAAAATACTGAGAAAGGCGTAAAAAGTTTCTCGGCTGGAGGAGTTGACAGAGGTGATGTTTATCCTGTACAACTCAGGCTCTCCGTTTTGCAGGAAACCAATTCATTGGCGGTCAAAATTTGCAAAAAGGACAATTCAGTTGAATGCTTCAGAAGAGCATGCAAGATATTCAGTTTGGATTCTGAGCAGTTGCGCATTTGGGATATTTCTGGCCAAACAACCTTGTTTTTCGAAAGTGATGTGAGCAATTCCAAGGATTGTCAACAACAAGCAGATCAGGAAATCCTCCTAGAGCTGCAGATTTATGGATTATCAGACTCCATCAAATTGAAGGAATCAAAAAAAGAAGATGGTTCCACACAGCAAACCAATGGGATTACCAATGGCATGAATGGTGGCACAGTGTTCAGATTTGGACGAAGTAATTCTTTGAGCTTTTTGGGTAAAGCTGGAGAAGCTGGAACTTTGGGGTTGACAGGCTTGCAGAATCTAGGAAACACTTGTTTCATGAACAGTTCCCTTCAGTGCTTGGCTCACACACCGAAGCTTGTCGACTTCTTTCTTGGCGAGTACAGTAAAGAAATAAATCTTGACAATCCATTGGGAATGAAAGGTGAGATCGCCTTAGCTTTTGGTGACTTGTTAAGGAGTCTGTGGGCTCCAGGTGCATCAACAGTGGCCCCAAGGACATTTAAAGCAAAACTTGCTCGCTTTGCTCCTCAGTTTAGTGGCTTTAATCAGCATGATTCGCAGGAGCTTCTAGCTTTCTTGCTGGATGGACTCCACGAGGACTTAAACCGTGTAAAGAACAAGCCTTACGTGGAAGCAAAAGATGGAGATGGCCGTCCAGACGCAGAAGTGGCTGATGAATATTGGCGAAATCATGTGGCTCGCAATGATTCAATAATTGTTGATGTGTGCCAAGGCCAATACAAGTCAACATTAGTTTGTCCTATTTGCAAAAAGGTTTCTGTTATGTTTGATCCGTTCATGTACCTATCGCTACCATTGCCATGCACATCAATGCGAACAATGGATTTAACAGTCATGAGTGCCGATGGGAGTAGTTTGCCTATTCCATTGACTGTCAACGTTCCTAAGTTTGGAAAATTTGAAGATCTTCATAAGGCTCTTGTCACTGCCTGTTCTTTACCAGAGGAGGAGACTTTATTGGTTACTGAGGTATACAACAATCGGATTATTCGCTTCCTGGAGGAGCCTACTGATTCATTAACCTTGATCAGAGATGGTGACAAACTTGTCGTGTATCGGTTAAAGAAGGATGCAAACAATTCTCCTTTAATTGTGTATATGCATCAGAAGCTGGAAGAGCAGTTTATATCTGGGAAATCTAGCCCAACTTGGAAGGCATTTGGAATCCCCTTGGTCTCAAGGCTTTGTGATGTCGAGAATGGATCTGATGTCGAGAACCTGTACCTGAAGCTGCTTAGTTCATTTAAGATGCCTACTGAATTCTTTACAGAGAATCTTGAAAACCCAACTGAAGAAGAAGCCACTGATAAAACAGATACCGATGGTACTACTTCAGTTGAGGATACAAATTCCACTGATGTGAAGGAGACTACTGAATCTCTTCCAGATCCTGTGTTGAGGCTTTACCTCACCGACGACAGAGGAAACTCGATAGAAGCTGAAATGTTGAAAGAAAAGCCTGTAAATAAATCCAAGCGGTTGAATGTGCTTGCACGTTGGCCTGTAAAAGAGCTTGACGTTTATGATACTTGTCTTCTGAGCTCCTTACCTGAGGTTTCCAAATCTGGAACTAAGAGACCCCAAGAATCCGTTTCGCTTTTCAAGTGCCTTGAAGCATTCTTGACGGAGGAGCCTCTTGGTCCTGATGACATGTGGTATTGTCCTGGGTGCAAAGAACACCGGCAAGCCATTAAAAAGTTAGATCTCTGGAGGTTGCCAGAGATCCTGGTTATTCATCTGAAGAGGTTTTCGTATAGCCGGTTTATGAAGAACAAGCTGGAGGCATATGTGGATTTCCCGCTAGATAATCTTGATCTATCAAGCTACATCTCCTACAAGAATGGTCAGACAACATATCGTTACATGCTCTATGCGATTAGCAATCACTATGGGAGCATGGGAGGTGGTCATTACACTGCATATGTTCACCATGGAGGTGATCGATGGTATGACTTTGATGATAGCCATGTCCACCAAATCAGCCAAGAAAAGATCAAGACCTCGGCTGCTTACGTTCTGTTCTATAAACGCCTTGTAGACTAA
CDS Sequence
Protein Sequence