Information report for AT5G21170
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0020003 — plant ovule — óvulo vegetal (Spanish, exact), 胚珠 (Japanese, exact), Poaceae ovule (narrow), Zea ovule (narrow)
Functional Keywords
Literature and News
- Alternative splicing modulation by a LAMMER kinase impinges on developmental and transcriptome expression. DOI: 10.1105/tpc.011056 ; PMID: 12671088
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
- Transcriptome profiling of the response of Arabidopsis suspension culture cells to Suc starvation. DOI: 10.1104/pp.104.044362 ; PMID: 15310832
- The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions. DOI: 10.1104/pp.105.068171 ; PMID: 16258011
- Enhanced tolerance to environmental stress in transgenic plants expressing the transcriptional coactivator multiprotein bridging factor 1c. DOI: 10.1104/pp.105.070110 ; PMID: 16244138
- The early dark-response in Arabidopsis thaliana revealed by cDNA microarray analysis. DOI: 10.1007/s11103-005-4211-x ; PMID: 16514558
- Temporal responses of transcripts, enzyme activities and metabolites after adding sucrose to carbon-deprived Arabidopsis seedlings. DOI: 10.1111/j.1365-313X.2006.02979.x ; PMID: 17217462
- Genome-wide analysis of Arabidopsis responsive transcriptome to nitrogen limitation and its regulation by the ubiquitin ligase gene NLA. DOI: 10.1007/s11103-007-9241-0 ; PMID: 17885809
- N-myristoylation regulates the SnRK1 pathway in Arabidopsis. DOI: 10.1105/tpc.107.051870 ; PMID: 17827350
- Genome-wide expression profiling Arabidopsis at the stage of Golovinomyces cichoracearum haustorium formation. DOI: 10.1104/pp.107.111286 ; PMID: 18218973
- Articulation of three core metabolic processes in Arabidopsis: fatty acid biosynthesis, leucine catabolism and starch metabolism. DOI: 10.1186/1471-2229-8-76 ; PMID: 18616834
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Beta-subunits of the SnRK1 complexes share a common ancestral function together with expression and function specificities; physical interaction with nitrate reductase specifically occurs via AKINbeta1-subunit. DOI: 10.1104/pp.108.123026 ; PMID: 18768910
- In silico comparison of transcript abundances during Arabidopsis thaliana and Glycine max resistance to Fusarium virguliforme. DOI: 10.1186/1471-2164-9-S2-S6 ; PMID: 18831797
- Expression-based discovery of candidate ovule development regulators through transcriptional profiling of ovule mutants. DOI: 10.1186/1471-2229-9-29 ; PMID: 19291320
- The trehalose 6-phosphate/SnRK1 signaling pathway primes growth recovery following relief of sink limitation. DOI: 10.1104/pp.113.220657 ; PMID: 23735508
- The hybrid four-CBS-domain KINβγ subunit functions as the canonical γ subunit of the plant energy sensor SnRK1. DOI: 10.1111/tpj.12192 ; PMID: 23551663
- SnRK1 from Arabidopsis thaliana is an atypical AMPK. DOI: 10.1111/tpj.12813 ; PMID: 25736509
- A role for the carbohydrate-binding module (CBM) in regulatory SnRK1 subunits: the effect of maltose on SnRK1 activity. DOI: 10.1111/tpj.14026 ; PMID: 30003611
- The Peptide Hormone Receptor CEPR1 Functions in the Reproductive Tissue to Control Seed Size and Yield. DOI: 10.1104/pp.20.00172 ; PMID: 32317363
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
Gene Resources
- UniProt: Q2V357
- EMBL: CP002688
- AlphaFoldDB: Q2V357
- EnsemblPlants: AT5G21170.2
- Gramene: AT5G21170.2
- ExpressionAtlas: AT5G21170
- InterPro: IPR006828, IPR013783, IPR014756
- PANTHER: PTHR46316, PTHR46316:SF9
- SUPFAM: SSF160219, SSF81296
- Gene3D: 2.60.40.10, 6.20.250.60
- SWISS-MODEL: Q2V357
- Conserved Domain Database: cd02859
Sequences
cDNA Sequence
- >AT5G21170.2
ATCTCTCTCCTCTCTTTGTCTCTCTCGCTTCTGTGATTTGGGCTTTTTCAGATGGGAAATGCGAACGGCAAAGACGAAGACGCCGCCGCCGGTAGCGGTGGTGCAGATGTTACCTCGTCCTCGGCGAGATCTAATGGCGGCGATCCTTCTGCACGCAGTCGTCACCGTCGTCCTTCTTCAGACTCTATGAGCAGTTCTCCTCCCGGAAGTCCTGCTCGATCTCCATCTCCTTTCTTATTCGCTCCTCAGCCCACATTGTTATTCCACGTTACATCTTACAACATTTGCTCACCTATGCGTCACCTCTTCCATTGTTTAGGCTTAACATGTGTACCTAATGGCTGCATTTCGTGTCGGATGGTTCCCGTGGCTCCATTGCAGAGAGCAAACGCCCCTCCTCCTAATAACATCCAATGGAACCAATCACAGAGAGTTTTTGATAATCCCCCAGAGCAAGGAATCCCTACCATCATTACATGGAACCAAGGAGGTAATGATGTGGCGGTGGAAGGATCATGGGACAATTGGAGATCAAGGAAGAAGCTGCAGAAATCAGGGAAAGACCACTCGATTCTCTTTGTCCTTCCATCTGGCATATACCACTACAAGGTGATTGTGGACGGTGAATCCAAATACATCCCAGATTTACCCTTTGTAGCAGACGAAGTTGGCAATGTCTGTAACATTCTCGATGTTCATAACTTTGTGCCAGAAAACCCAGAAAGCATAGTGGAGTTTGAGGCGCCACCATCACCTGATCATAGCTACGGTCAAACCCTACCAGCCGCAGAAGATTACGCGAAAGAGCCACTGGCGGTGCCACCTCAGCTTCATCTAACACTTCTTGGCACTACTGAAGAGACAGCCATAGCCACAAAGCCTCAACATGTGGTGCTTAACCATGTGTTCATAGAGCAAGGATGGACTCCTCAATCCATAGTAGCTTTGGGTTTAACCCACAGGTTCGAGTCTAAGTACATAACTGTTGTCCTCTACAAACCGCTCACACGGTAACCCTAAAAATTCAGTGCCACATTGTTCTCTCTCTTTCTTTCTTTTTCATCTCTCAATTATGTGAAAACATGTTCTTTGTTCATAGTGACTAGTGAGTGCCCAACATTTGAGTTTATTAACCTCTTTCTTACCTGGTTTGTGGTGCTTGTGTACAAAGCTTCTCTCATTGTAACGATTGTTGTTTTATTTTCTGCAAAAACTGTAAAATACATTCGCTAATAATGGCTATAACAAGCTTATCTGCTAGCAACCAAACA - >AT5G21170.3
ATCTCTCTCCTCTCTTTGTCTCTCTCGCTTCTGTGATTTGGGCTTTTTCAGATGGGAAATGCGAACGGCAAAGACGAAGACGCCGCCGCCGGTAGCGGTGGTGCAGATGTTACCTCGTCCTCGGCGAGATCTAATGGCGGCGATCCTTCTGCACGCAGTCGTCACCGTCGTCCTTCTTCAGACTCTATGAGCAGTTCTCCTCCCGGAAGTCCTGCTCGATCTCCATCTCCTTTCTTATTCGCTCCTCAGCCCACATTGTTATTCCACGTTACATCTTACAACATTTGCTCACCTATGCGTCACCTCTTCCATTGTTTAGGCTTAACATGTGTACCTAATGGCTGCATTTCGTGTCGGATGGTTCCCGTGGCTCCATTGCAGAGAGCAAACGCCCCTCCTCCTAATAACATCCAATGGAACCAATCACAGAGAGTTTTTGATAATCCCCCAGAGCAAGGAATCCCTACCATCATTACATGGAACCAAGGAGGTAATGATGTGGCGGTGGAAGGATCATGGGACAATTGGAGATCAAGGAAGAAGCTGCAGAAATCAGGGAAAGACCACTCGATTCTCTTTGTCCTTCCATCTGGCATATACCACTACAAGGTGATTGTGGACGGTGAATCCAAATACATCCCAGATTTACCCTTTGTAGCAGACGAAGTTGGCAATGTCTGTAACATTCTCGATGTTCATAACTTTGTGCCAGAAAACCCAGAAAGCATAGTGGAGTTTGAGGCGCCACCATCACCTGATCATAGCTACGGTCAAACCCTACCAGCCGCAGAAGATTACGCGAAAGAGCCACTGGCGGTGCCACCTCAGCTTCATCTAACACTTCTTGGCACTACTGAAGAGACAGCCATAGCCACAAAGCCTCAACATGTGGTGCTTAACCATGTGTTCATAGAGCAAGGATGGACTCCTCAATCCATAGTAGCTTTGGGTTTAACCCACAGGTTCGAGTCTAAGTACATAACTGTTGTCCTCTACAAACCGCTCACACGGTAACCCTAAAAATTCAGTGCCACATTGTTCTCTCTCTTTCTTTCTTTTTCATCTCTCAATTATGTGAAAACATGTTCTTTGTTCATAGTGACTAGTGAGTGCCCAACATTTGAGTTTATTAACCTCTTTCTTACCTGGTTTGTGGTGCTTGTGTACAAAGCTTCTCTCATTGTAACGATTGTTGTTTTATTTTCTGCAAAAACTGTAAAATACATTCGCTAATAATGGCTATAACAAGCTTATCTGCTAGCAACCAAACA - >AT5G21170.1
ATCTCTCTCCTCTCTTTGTCTCTCTCGCTTCTGTGATTTGGGCTTTTTCAGATGGGAAATGCGAACGGCAAAGACGAAGACGCCGCCGCCGGTAGCGGTGGTGCAGATGTTACCTCGTCCTCGGCGAGATCTAATGGCGGCGATCCTTCTGCACGCAGTCGTCACCGTCGTCCTTCTTCAGACTCTATGAGCAGTTCTCCTCCCGGAAGTCCTGCTCGATCTCCATCTCCTTTCTTATTCGCTCCTCAGCCCACATTGTTATTCCACGTTACATCTTACAACATTTGCTCACCTATGCGTCACCTCTTCCATTGTTTAGGCTTAACATGTGTACCTAATGGCTGCATTTCGTGTCGGATGGTTCCCGTGGCTCCATTGCAGAGAGCAAACGCCCCTCCTCCTAATAACATCCAATGGAACCAATCACAGAGAGTTTTTGATAATCCCCCAGAGCAAGGAATCCCTACCATCATTACATGGAACCAAGGAGGTAATGATGTGGCGGTGGAAGGATCATGGGACAATTGGAGATCAAGGAAGAAGCTGCAGAAATCAGGGAAAGACCACTCGATTCTCTTTGTCCTTCCATCTGGCATATACCACTACAAGGTGATTGTGGACGGTGAATCCAAATACATCCCAGATTTACCCTTTGTAGCAGACGAAGTTGGCAATGTCTGTAACATTCTCGATGTTCATAACTTTGTGCCAGAAAACCCAGAAAGCATAGTGGAGTTTGAGGCGCCACCATCACCTGATCATAGCTACGGTCAAACCCTACCAGCCGCAGAAGATTACGCGAAAGAGCCACTGGCGGTGCCACCTCAGCTTCATCTAACACTTCTTGGCACTACTGAAGAGACAGCCATAGCCACAAAGCCTCAACATGTGGTGCTTAACCATGTGTTCATAGAGCAAGGATGGACTCCTCAATCCATAGTAGCTTTGGGTTTAACCCACAGGTTCGAGTCTAAGTACATAACTGTTGTCCTCTACAAACCGCTCACACGGTAACCCTAAAAATTCAGTGCCACATTGTTCTCTCTCTTTCTTTCTTTTTCATCTCTCAATTATGTGAAAACATGTTCTTTGTTCATAGTGACTAGTGAGTGCCCAACATTTGAGTTTATTAACCTCTTTCTTACCTGGTTTGTGGTGCTTGTGTACAAAGCTTCTCTCATTGTAACGATTGTTGTTTTATTTTCTGCAAAAACTGTAAAATACATTCGCTAATAATGGCTATAACAAGCTTATCTGCTAGCAACCAAACA
CDS Sequence
Protein Sequence