Information report for AT5G21160
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0003729 — enables — mRNA binding
- GO:0010286 — involved in — heat acclimation
- GO:1903432 — involved in — regulation of TORC1 signaling
- GO:0010494 — located in — cytoplasmic stress granule
- GO:0042254 — involved in — ribosome biogenesis
- GO:0006402 — involved in — mRNA catabolic process
- GO:0061014 — acts upstream of or within — positive regulation of mRNA catabolic process
- GO:1905538 — enables — polysome binding
- GO:0005844 — part of — polysome
- GO:0005515 — enables — protein binding
- GO:0000932 — located in — P-body
- GO:0048255 — involved in — mRNA stabilization
- GO:0009749 — involved in — response to glucose
- larp1-1 — 36% shorter roots, reduced number of secondary roots, smaller first true leaves, slight chlorosis due to reduced chlorophyll levels.
Functional Keywords
Literature and News
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- A comprehensive analysis of the La-motif protein superfamily. DOI: 10.1261/rna.1478709 ; PMID: 19299548
- XRN4 and LARP1 are required for a heat-triggered mRNA decay pathway involved in plant acclimation and survival during thermal stress. DOI: 10.1016/j.celrep.2013.11.019 ; PMID: 24332370
- Protein and metabolite composition of Arabidopsis stress granules. DOI: 10.1111/nph.15690 ; PMID: 30664249
- Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. DOI: 10.1038/s41477-019-0378-z ; PMID: 30833711
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Parallel global profiling of plant TOR dynamics reveals a conserved role for LARP1 in translation. DOI: 10.7554/eLife.58795 ; PMID: 33054972
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
Gene Resources
- UniProt: F4K704
- EMBL: CP002688
- AlphaFoldDB: F4K704
- EnsemblPlants: AT5G21160.3
- Gramene: AT5G21160.3
- Orthologous matrix: FRQEIFQ
- ExpressionAtlas: AT5G21160
- InterPro: IPR006607, IPR006630, IPR036388
- PANTHER: PTHR22792, PTHR22792:SF101
- SUPFAM: SSF46785
- PROSITE: PS50961
- Gene3D: 1.10.10.10
- SWISS-MODEL: F4K704
- Conserved Domain Database: cd07323
Sequences
cDNA Sequence
- >AT5G21160.1
GTTTTTGGGGTTATACGTTTCACTGTTTGTTTCATCCTCGCTTATTCCTCCCTTAAAGAGTGTCGCCACCAAAACACACACACACACTTGCCTCCTTCTTCAACCTCTCTTCCTCACATTGCGTCTTCTCCATCTGATCCTTCAATCCTCGTTCTGTTTTTGATCCAATTGAATCGCTTCCTTGTTTTGATTCTGTTTATCTTTCCAAGTTTCTAATGATGGCGGAGACTGAAGGATCAGTGGCCGATGATCGAGAATTGATCACCCGTGAAGGTGGTATTGGGACTAAGTCTCCGTGGAAAACAACGACTTCTCCTGTTGAGACTATTGACGCTCCTGTAATGGGAGCTCATTCGTGGCCTGCACTCGCCGACGCTGCCCAACAACCGCGTCCTAAGAATCCTCCGGCGCCTGCACCTGCTCCGCCGTCTAAAAACATTCCGACGTCTATCCCAATCCCTACTCCGGCCGTAACTGGTCAAGCGAAATCTAAGGGTGGTGGAAAGGCTAATCCTGGACACAAGAATCCATCTGGCCGTCATTCAAAACCAGGTCCGAGGAGCAACCAGAATGGTCCTCCTCCTCCTCCTTATCTCGTGCATGCTGTACCGTATCATCCACCTCCTTTTCCACCTATGGTGCCTCTGCCACATGCTGCTGGTCCAGATTTTCCATATGCACCTTATCCTCCCTACCCGGTTCCTGTGCCTCCTGTTACTGAGTCTGGCAATGAGAAGCAAGTTCAAGCTTCCCCTCTTCCACCTGTGTTGCCAGCTCCTCAAGGGGATCCTGGAAAGCCTTGGCCGCATCAGAGGGGTTTTGACCCCAGAAACATGCCACAAGGTGCTGGACCAAGAAATTTCGGGAGACCTCCATTTATGGGTCCAGCTCCTGGGTTCCTGGTTGGTCCAGGTCCAGGCTTTCCTGGGCCTGTATACTACTTGCCGGGTCCACCCCCTGGAGCTATAAGAGGTCCTTATCCTCCACGCTTTGCTCCATACCCTGTAAACCAGGGTCCTCCAATACTATCTCCAGAAAAACTCGACTTAAGGGATAGAGTCTTAAAACAAGTAGAGTATTATTTCAGTGATGAAAACCTTGAGAATGATCATTACCTCATTTCTTTGATGGATGAAGAAGGATGGGTTCCCACAAAAATTATAGCTGGCTTCAAAAGGGTTAAAGCAATGACTATGGATGTTGATTTTATAGTCTATGCGTTGGGGTTTTCTAATTCTGTTGAAGTGCAGGGTGACCAGATACGCAAGCGTGACAAGTGGTCTGACTGGATTCCTGCATCTAAAAAGTCAACCTCTGCGGAGACAATTGGAGACGGTGACAAAGATTCCCCAAAAAGTATAACAAGCGGGGATAATTTTGGAAACCCTTCAAAGGGTTCTTCAAAGCCTACCGTGTCCGATTTCTCTTCAGAGGGAGCTCAGTCATCAAGAACCAATAATTATAAAAGTGGTAACCTGAAATCATCAGCAGACGAAAAAAGAAATGTGGAGGACTTGTCAAACGATTTTTCAAACACTTTCTTGCTTGACGAGGAACTAGATCTGGAGCACAGAAGCCCGAGAAAGAGTGGACTGTCCATGTCCAAAAGCATTGAGTATGAAGACGATGATATGGCTGTTGATGATCAAGATATTCAGAAACTTGTAATTGTTACCCAGAATAGTGGTAAAAGTGATGGCGCTGGAATCGGTGGGACGGAAGCAAAAAATATTCCTAAGGAGCTTGCCTCCACAATCAACGATGGTCTTTACTACTTTGAGCAGGAGCTTAAAAAAAAACGATCTGGCCGTAGGAAGAACAACTCCCATTTGGATACCAAAGATGGGAAAATCAAATCTGGGGAAGGATTGAACACTAAGTTGGGCGAAAATTCCGCAGCAAATGATGGAGGGGAAGAGCATGGAATCATTACTTCACGGAGGAAGCAAAATAAGGGAACGCACAAACATCATACAGCCCATGCACGGAGGTTCTTCTCGAGTAACATAAGGAACAATGGAAATATATCAGAAAGTCCGCCTAGTAGCTCCATTGGATTTTTCTTTGGTTCTACACCACCAGACAGTCATGGCCCTAGGCTTTCGAAATTGAGTTCATCTCCACAATGTACACTTTCTGGAAGCAGTCCACCTGTGGGCTCTTTGCCAAAATCATTTCCACCTTTTCAACATCCGAGCCACCAACTGTTGGAAGAGAATGGGTTTAAACAAGAAAAGTACTTGAAGTATCGCAAGCGCTGCTTAAACGAAAGAAAGAAGCTAGGTAGCGGATGCAGTGAGGAAATGAACCATTTGTACCGATTTTGGTCGTATTTCCTCAGAGACACATTTGTTCTCTCTATGTATGATGACTTTCAGAAGTTTGCTCTTGAGGATGCAGCTGGCAATTACGATTATGGGCTGGAGTGTCTCTTTAGGTTTTATAGTTATGGTCTGGAGAAGCACTTTGATGAGGACCTTTACAAGGACTTTGAGAAGCTATCGCTTGACTTCTACCACAAGGGAAATCTGTATGGCTTGGAGAAATATTGGGCATTCCACCATTATCGAGGCAAAGAAGAACCGATAACAAAGCACCCTGAGCTAGAGAAACTACTGAAGGAAGAATTCCGTAGCATAGACGATTTCCGAGCAAAGGAAACAATCACCAACCAAAAAGAAAACAAGTCTCACTGATGAGGATGTGAAGTGAAGAAGAAGCAGAGATATGTGTTGATGCCGCAGAGCAAATGATCCTTAAATCTTGACCTAAAGTTTTGTGTATCTCTTTCTTCTGGGGGAAGTGACCAACCAAGTGAAGCAATCACTCTGAATTTTAAAGGATAATTTCCTTGGTGGTATTTTTCTTTTGTGGGATTATTTTTGTGGATTTTGGATGGATGCAGGATGATCTCTGCAATACAAACAAGAGCTTTGACTGAAGAGGCGTTCATCTACACAAGAGTTTCGCCCTCTCCCTAAAAGTTGTAATCTTTTTCTTTTTTGTATATATTTCATTTTCTAATTTACTCAATTTTAGAAGAAAAAAAAACAAAAAAAAAATGATGTGATTTGTAGTATCTGTAGAAACAATAAGAGATGTTTTATTTGACAATTTTATATAGATAGTACATTTTCTTGTTTGTAAATTTTTGTCTTCTTGCATCTTATATATTTGGCCTACGCAGAATATTTTTTCAAAGAGTTCTTATTTACACAAATATTCCTGATTCTTTCTTTTAGATATTGATAACT - >AT5G21160.3
GTTTTTGGGGTTATACGTTTCACTGTTTGTTTCATCCTCGCTTATTCCTCCCTTAAAGAGTGTCGCCACCAAAACACACACACACACTTGCCTCCTTCTTCAACCTCTCTTCCTCACATTGCGTCTTCTCCATCTGATCCTTCAATCCTCGTTCTGTTTTTGATCCAATTGAATCGCTTCCTTGTTTTGATTCTGTTTATCTTTCCAAGTTTCTAATGATGGCGGAGACTGAAGGATCAGTGGCCGATGATCGAGAATTGATCACCCGTGAAGGTGGTATTGGGACTAAGTCTCCGTGGAAAACAACGACTTCTCCTGTTGAGACTATTGACGCTCCTGTAATGGGAGCTCATTCGTGGCCTGCACTCGCCGACGCTGCCCAACAACCGCGTCCTAAGAATCCTCCGGCGCCTGCACCTGCTCCGCCGTCTAAAAACATTCCGACGTCTATCCCAATCCCTACTCCGGCCGTAACTGGTCAAGCGAAATCTAAGGGTGGTGGAAAGGCTAATCCTGGACACAAGAATCCATCTGGCCGTCATTCAAAACCAGGTCCGAGGAGCAACCAGAATGGTCCTCCTCCTCCTCCTTATCTCGTGCATGCTGTACCGTATCATCCACCTCCTTTTCCACCTATGGTGCCTCTGCCACATGCTGCTGGTCCAGATTTTCCATATGCACCTTATCCTCCCTACCCGGTTCCTGTGCCTCCTGTTACTGAGTCTGGCAATGAGAAGCAAGTTCAAGCTTCCCCTCTTCCACCTGTGTTGCCAGCTCCTCAAGGGGATCCTGGAAAGCCTTGGCCGCATCAGAGGGGTTTTGACCCCAGAAACATGCCACAAGGTGCTGGACCAAGAAATTTCGGGAGACCTCCATTTATGGGTCCAGCTCCTGGGTTCCTGGTTGGTCCAGGTCCAGGCTTTCCTGGGCCTGTATACTACTTGCCGGGTCCACCCCCTGGAGCTATAAGAGGTCCTTATCCTCCACGCTTTGCTCCATACCCTGTAAACCAGGGTCCTCCAATACTATCTCCAGAAAAACTCGACTTAAGGGATAGAGTCTTAAAACAAGTAGAGTATTATTTCAGTGATGAAAACCTTGAGAATGATCATTACCTCATTTCTTTGATGGATGAAGAAGGATGGGTTCCCACAAAAATTATAGCTGGCTTCAAAAGGGTTAAAGCAATGACTATGGATGTTGATTTTATAGTCTATGCGTTGGGGTTTTCTAATTCTGTTGAAGTGCAGGGTGACCAGATACGCAAGCGTGACAAGTGGTCTGACTGGATTCCTGCATCTAAAAAGTCAACCTCTGCGGAGACAATTGGAGACGGTGACAAAGATTCCCCAAAAAGTATAACAAGCGGGGATAATTTTGGAAACCCTTCAAAGGGTTCTTCAAAGCCTACCGTGTCCGATTTCTCTTCAGAGGGAGCTCAGTCATCAAGAACCAATAATTATAAAAGTGGTAACCTGAAATCATCAGCAGACGAAAAAAGAAATGTGGAGGACTTGTCAAACGATTTTTCAAACACTTTCTTGCTTGACGAGGAACTAGATCTGGAGCACAGAAGCCCGAGAAAGAGTGGACTGTCCATGTCCAAAAGCATTGAGTATGAAGACGATGATATGGCTGTTGATGATCAAGATATTCAGAAACTTGTAATTGTTACCCAGAATAGTGGTAAAAGTGATGGCGCTGGAATCGGTGGGACGGAAGCAAAAAATATTCCTAAGGAGCTTGCCTCCACAATCAACGATGGTCTTTACTACTTTGAGCAGGAGCTTAAAAAAAAACGATCTGGCCGTAGGAAGAACAACTCCCATTTGGATACCAAAGATGGGAAAATCAAATCTGGGGAAGGATTGAACACTAAGTTGGGCGAAAATTCCGCAGCAAATGATGGAGGGGAAGAGCATGGAATCATTACTTCACGGAGGAAGCAAAATAAGGGAACGCACAAACATCATACAGCCCATGCACGGAGGTTCTTCTCGAGTAACATAAGGAACAATGGAAATATATCAGAAAGTCCGCCTAGTAGCTCCATTGGATTTTTCTTTGGTTCTACACCACCAGACAGTCATGGCCCTAGGCTTTCGAAATTGAGTTCATCTCCACAATGTACACTTTCTGGAAGCAGTCCACCTGTGGGCTCTTTGCCAAAATCATTTCCACCTTTTCAACATCCGAGCCACCAACTGTTGGAAGAGAATGGGTTTAAACAAGAAAAGTACTTGAAGTATCGCAAGCGCTGCTTAAACGAAAGAAAGAAGCTAGGTAGCGGATGCAGTGAGGAAATGAACCATTTGTACCGATTTTGGTCGTATTTCCTCAGAGACACATTTGTTCTCTCTATGTATGATGACTTTCAGAAGTTTGCTCTTGAGGATGCAGCTGGCAATTACGATTATGGGCTGGAGTGTCTCTTTAGGTTTTATAGTTATGGTCTGGAGAAGCACTTTGATGAGGACCTTTACAAGGACTTTGAGAAGCTATCGCTTGACTTCTACCACAAGGGAAATCTGTATGGCTTGGAGAAATATTGGGCATTCCACCATTATCGAGGCAAAGAAGAACCGATAACAAAGCACCCTGAGCTAGAGAAACTACTGAAGGAAGAATTCCGTAGCATAGACGATTTCCGAGCAAAGGAAACAATCACCAACCAAAAAGAAAACAAGTCTCACTGATGAGGATGTGAAGTGAAGAAGAAGCAGAGATATGTGTTGATGCCGCAGAGCAAATGATCCTTAAATCTTGACCTAAAGTTTTGTGTATCTCTTTCTTCTGGGGGAAGTGACCAACCAAGTGAAGCAATCACTCTGAATTTTAAAGGATAATTTCCTTGGTGGTATTTTTCTTTTGTGGGATTATTTTTGTGGATTTTGGATGGATGCAGGATGATCTCTGCAATACAAACAAGAGCTTTGACTGAAGAGGCGTTCATCTACACAAGAGTTTCGCCCTCTCCCTAAAAGTTGTAATCTTTTTCTTTTTTGTATATATTTCATTTTCTAATTTACTCAATTTTAGAAGAAAAAAAAACAAAAAAAAAATGATGTGATTTGTAGTATCTGTAGAAACAATAAGAGATGTTTTATTTGACAATTTTATATAGATAGTACATTTTCTTGTTTGTAAATTTTTGTCTTCTTGCATCTTATATATTTGGCCTACGCAGAATATTTTTTCAAAGAGTTCTTATTTACACAAATATTCCTGATTCTTTCTTTTAGATATTGATAACT - >AT5G21160.2
GTTTTTGGGGTTATACGTTTCACTGTTTGTTTCATCCTCGCTTATTCCTCCCTTAAAGAGTGTCGCCACCAAAACACACACACACACTTGCCTCCTTCTTCAACCTCTCTTCCTCACATTGCGTCTTCTCCATCTGATCCTTCAATCCTCGTTCTGTTTTTGATCCAATTGAATCGCTTCCTTGTTTTGATTCTGTTTATCTTTCCAAGTTTCTAATGATGGCGGAGACTGAAGGATCAGTGGCCGATGATCGAGAATTGATCACCCGTGAAGGTGGTATTGGGACTAAGTCTCCGTGGAAAACAACGACTTCTCCTGTTGAGACTATTGACGCTCCTGTAATGGGAGCTCATTCGTGGCCTGCACTCGCCGACGCTGCCCAACAACCGCGTCCTAAGAATCCTCCGGCGCCTGCACCTGCTCCGCCGTCTAAAAACATTCCGACGTCTATCCCAATCCCTACTCCGGCCGTAACTGGTCAAGCGAAATCTAAGGGTGGTGGAAAGGCTAATCCTGGACACAAGAATCCATCTGGCCGTCATTCAAAACCAGGTCCGAGGAGCAACCAGAATGGTCCTCCTCCTCCTCCTTATCTCGTGCATGCTGTACCGTATCATCCACCTCCTTTTCCACCTATGGTGCCTCTGCCACATGCTGCTGGTCCAGATTTTCCATATGCACCTTATCCTCCCTACCCGGTTCCTGTGCCTCCTGTTACTGAGTCTGGCAATGAGAAGCAAGTTCAAGCTTCCCCTCTTCCACCTGTGTTGCCAGCTCCTCAAGGGGATCCTGGAAAGCCTTGGCCGCATCAGAGGGGTTTTGACCCCAGAAACATGCCACAAGGTGCTGGACCAAGAAATTTCGGGAGACCTCCATTTATGGGTCCAGCTCCTGGGTTCCTGGTTGGTCCAGGTCCAGGCTTTCCTGGGCCTGTATACTACTTGCCGGGTCCACCCCCTGGAGCTATAAGAGGTCCTTATCCTCCACGCTTTGCTCCATACCCTGTAAACCAGGGTCCTCCAATACTATCTCCAGAAAAACTCGACTTAAGGGATAGAGTCTTAAAACAAGTAGAGTATTATTTCAGTGATGAAAACCTTGAGAATGATCATTACCTCATTTCTTTGATGGATGAAGAAGGATGGGTTCCCACAAAAATTATAGCTGGCTTCAAAAGGGTTAAAGCAATGACTATGGATGTTGATTTTATAGTCTATGCGTTGGGGTTTTCTAATTCTGTTGAAGTGCAGGGTGACCAGATACGCAAGCGTGACAAGTGGTCTGACTGGATTCCTGCATCTAAAAAGTCAACCTCTGCGGAGACAATTGGAGACGGTGACAAAGATTCCCCAAAAAGTATAACAAGCGGGGATAATTTTGGAAACCCTTCAAAGGGTTCTTCAAAGCCTACCGTGTCCGATTTCTCTTCAGAGGGAGCTCAGTCATCAAGAACCAATAATTATAAAAGTGGTAACCTGAAATCATCAGCAGACGAAAAAAGAAATGTGGAGGACTTGTCAAACGATTTTTCAAACACTTTCTTGCTTGACGAGGAACTAGATCTGGAGCACAGAAGCCCGAGAAAGAGTGGACTGTCCATGTCCAAAAGCATTGAGTATGAAGACGATGATATGGCTGTTGATGATCAAGATATTCAGAAACTTGTAATTGTTACCCAGAATAGTGGTAAAAGTGATGGCGCTGGAATCGGTGGGACGGAAGCAAAAAATATTCCTAAGGAGCTTGCCTCCACAATCAACGATGGTCTTTACTACTTTGAGCAGGAGCTTAAAAAAAAACGATCTGGCCGTAGGAAGAACAACTCCCATTTGGATACCAAAGATGGGAAAATCAAATCTGGGGAAGGATTGAACACTAAGTTGGGCGAAAATTCCGCAGCAAATGATGGAGGGGAAGAGCATGGAATCATTACTTCACGGAGGAAGCAAAATAAGGGAACGCACAAACATCATACAGCCCATGCACGGAGGTTCTTCTCGAGTAACATAAGGAACAATGGAAATATATCAGAAAGTCCGCCTAGTAGCTCCATTGGATTTTTCTTTGGTTCTACACCACCAGACAGTCATGGCCCTAGGCTTTCGAAATTGAGTTCATCTCCACAATGTACACTTTCTGGAAGCAGTCCACCTGTGGGCTCTTTGCCAAAATCATTTCCACCTTTTCAACATCCGAGCCACCAACTGTTGGAAGAGAATGGGTTTAAACAAGAAAAGTACTTGAAGTATCGCAAGCGCTGCTTAAACGAAAGAAAGAAGCTAGGTAGCGGATGCAGTGAGGAAATGAACCATTTGTACCGATTTTGGTCGTATTTCCTCAGAGACACATTTGTTCTCTCTATGTATGATGACTTTCAGAAGTTTGCTCTTGAGGATGCAGCTGGCAATTACGATTATGGGCTGGAGTGTCTCTTTAGGTTTTATAGTTATGGTCTGGAGAAGCACTTTGATGAGGACCTTTACAAGGACTTTGAGAAGCTATCGCTTGACTTCTACCACAAGGGAAATCTGTATGGCTTGGAGAAATATTGGGCATTCCACCATTATCGAGGCAAAGAAGAACCGATAACAAAGCACCCTGAGCTAGAGAAACTACTGAAGGAAGAATTCCGTAGCATAGACGATTTCCGAGCAAAGGAAACAATCACCAACCAAAAAGAAAACAAGTCTCACTGATGAGGATGTGAAGTGAAGAAGAAGCAGAGATATGTGTTGATGCCGCAGAGCAAATGATCCTTAAATCTTGACCTAAAGTTTTGTGTATCTCTTTCTTCTGGGGGAAGTGACCAACCAAGTGAAGCAATCACTCTGAATTTTAAAGGATAATTTCCTTGGTGGTATTTTTCTTTTGTGGGATTATTTTTGTGGATTTTGGATGGATGCAGGATGATCTCTGCAATACAAACAAGAGCTTTGACTGAAGAGGCGTTCATCTACACAAGAGTTTCGCCCTCTCCCTAAAAGTTGTAATCTTTTTCTTTTTTGTATATATTTCATTTTCTAATTTACTCAATTTTAGAAGAAAAAAAAACAAAAAAAAAATGATGTGATTTGTAGTATCTGTAGAAACAATAAGAGATGTTTTATTTGACAATTTTATATAGATAGTACATTTTCTTGTTTGTAAATTTTTGTCTTCTTGCATCTTATATATTTGGCCTACGCAGAATATTTTTTCAAAGAGTTCTTATTTACACAAATATTCCTGATTCTTTCTTTTAGATATTGATAACT
CDS Sequence
Protein Sequence