Gene Details:
- Gene ID: AT5G21150
- Gene Symbol: AGO9
- Gene Name: ARGONAUTE 9
- Description: Argonaute family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0020003 — plant ovule — óvulo vegetal (Spanish, exact), 胚珠 (Japanese, exact), Poaceae ovule (narrow), Zea ovule (narrow)
Germplasm Phenotype:
- CS72560 — defects in small RNA accumulation
- CS72563 — partial complementation of small RNA accumulation
- SAIL_260_A03 — A proportion of pre-meiotic ovules have two MMCs and have several abnormally enlarged sub-epidermal cells.Plants are fertile and show no signs of ovule or seed abortion.
- SAIL_34_G10 — Abnormal megagametophyte formation. Many megaspore type cells form but do not progress to make embryo sacs.
- SALK_112059 — A proportion of pre-meiotic ovules have two MMCs and have several abnormally enlarged sub-epidermal cells.Plants are fertile and show no signs of ovule or seed abortion.
- ago4-1ago9-3 — F2 double homozygous ago4-1 ago9-3 individuals showed a significantly lower frequency of ovules with ectopic gametophytic precursors than homozygous ago4-1 or ago9-3 single mutant individuals.
Function-related keywords:
Literature:
- Fertile hypomorphic ARGONAUTE (ago1) mutants impaired in post-transcriptional gene silencing and virus resistance. DOI: 10.1105/tpc.010358 ; PMID: 11910010
- The identification of candidate genes for a reverse genetic analysis of development and function in the Arabidopsis gynoecium. DOI: 10.1104/pp.102.017798 ; PMID: 12805595
- Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation. DOI: 10.1104/pp.104.057935 ; PMID: 15908605
- Arabidopsis endogenous small RNAs: highways and byways. DOI: 10.1016/j.tplants.2006.07.006 ; PMID: 16893673
- Common functions for diverse small RNAs of land plants. DOI: 10.1105/tpc.107.051706 ; PMID: 17601824
- Comparative transcriptomics of Arabidopsis sperm cells. DOI: 10.1104/pp.108.125229 ; PMID: 18667720
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Expression-based discovery of candidate ovule development regulators through transcriptional profiling of ovule mutants. DOI: 10.1186/1471-2229-9-29 ; PMID: 19291320
- The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci. DOI: 10.1105/tpc.109.072199 ; PMID: 20173091
- Somatic small RNA pathways promote the mitotic events of megagametogenesis during female reproductive development in Arabidopsis. DOI: 10.1242/dev.075390 ; PMID: 22399683
- Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome. DOI: 10.1016/j.cell.2012.10.054 ; PMID: 23313553
- Specific argonautes selectively bind small RNAs derived from potato spindle tuber viroid and attenuate viroid accumulation in vivo. DOI: 10.1128/JVI.01404-14 ; PMID: 25100851
- Functional and Genetic Analysis Identify a Role for Arabidopsis ARGONAUTE5 in Antiviral RNA Silencing. DOI: 10.1105/tpc.15.00264 ; PMID: 26023161
- A Multigenic Network of ARGONAUTE4 Clade Members Controls Early Megaspore Formation in Arabidopsis. DOI: 10.1534/genetics.116.188151 ; PMID: 27591749
- Temporal and spatial expression of genes involved in DNA methylation during reproductive development of sexual and apomictic Eragrostis curvula. DOI: 10.1038/s41598-017-14898-5 ; PMID: 29118334
- Crosstalk between epigenetic silencing and infection by tobacco rattle virus in Arabidopsis. DOI: 10.1111/mpp.12850 ; PMID: 31274236
- Heterochromatic silencing is reinforced by ARID1-mediated small RNA movement in Arabidopsis pollen. DOI: 10.1111/nph.16871 ; PMID: 32783185
- Genomic methylation patterns in pre-meiotic gynoecia of wild-type and RdDM mutants of Arabidopsis. DOI: 10.3389/fpls.2023.1123211 ; PMID: 36993852
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Sequences:
cDNA Sequence
- >AT5G21150.1
CACCAAAACAAACAAACCCTTTCTTCTTCCTCTCATAATCCCTCTCTCTCTTCTTCTCTCTCGCTCGCTGCTCTGTTTAGGGTTTTTCTCGTTCGTCTCTTCTATAAGTACTAGAGATGGATTCTGATGAACCGAATGGGAGTGGATTACCACCTCCACCACCTTTCGTTCCAGCAAATCTTGTCCCTGAAGTGGAGCCTGTAAAAAAGAACATTCTTCTCCCAATGGCTCGGCCTCGAGGCAGCGGCTCCAAAGGACAGAAGATTCCTCTTCTTACTAATCACTTTGGAGTCAAGTTCAACAAACCAAGCGGTTACTTCTTTCATTACAGTGTTGCTATCAATTATGAAGATGGCCGTCCAGTGGAGGCTAAAGGTATCGGCCGAAAGATTCTTGACAAAGTTCAGGAGACCTATCAAAGTGATTTGGGTGCCAAATACTTTGCTTATGATGGCGAGAAGACTCTCTTCACTGTTGGTGCTCTTCCCAGCAACAAACTTGACTTCTCTGTTGTTCTTGAAGAAATACCTTCTAGCAGAAATCACGCTGGAAATGATACAAATGATGCTGATAGAAAAAGATCAAGGCGTCCCAACCAAACTAAGAAATTCATGGTTGAGATAAGTTATGCTGCAAAGATCCCCATGCAGGCTATTGCAAGCGCTCTTCAAGGGAAGGAGACAGAGAATCTTCAAGACGCTCTGAGAGTGCTGGATATTATTTTGCGCCAGAGTGCAGCTAGGCAAGGTTGCCTCCTTGTTCGCCAGTCCTTTTTCCACAATGACGTAAAGAACTTTGTACCTATTGGTGGAGGTGTCAGTGGTTGCAGAGGGTTCCATTCAAGTTTCAGAACTACTCAGGGAGGCTTATCCCTGAATATTGACACTTCAACTACGATGATAGTACAACCTGGACCTGTAGTTGATTTCCTGCTTGCTAACCAGAACAAGAAAGATCCATACGGAATGGACTGGAACAAGGCTCGACGTGTCCTCAAGAATCTGAGAGTTCAAATTACTCTTTCCAATAGAGAATACAAGATAAGTGGACTAAGTGAACACAGCTGCAAAGATCAACTATTTACATGGAGGAAACCTAACGACAAGGGAGAATTTGAGGAGGTTGAGATCACAGTGCTCAATTACTATAAAGAGCGTAACATTGAAGTGCGTTATTCAGGTGACTTCCCTTGCATCAATGTTGGTAAGCCGAAGCGTCCCACTTACTTCCCCATTGAGTTCTGTAATCTTGTGTCTCTACAGCGATACACAAAATCGCTTACCAATTTTCAGAGGGCTGCCCTAGTTGAAAAGTCTAGGCAGAAGCCACCTGAAAGGATGGCCTCGCTAACCAAAGGTCTGAAGGACAGCAATTACAATGCCGACCCGGTATTGCAAGATAGTGGTGTTAGCATTATCACCAATTTTACCCAAGTTGAAGGCCGTATCTTACCAACACCAATGCTGAAAGTGGGCAAGGGAGAAAACCTTTCCCCAATCAAAGGAAAATGGAACTTTATGCGTAAGACACTCGCTGAGCCAACGACGGTTACTAGATGGGCTGTTGTGAACTTCTCTGCTCGCTGTGATACAAATACACTTATTCGTGACTTGATTAAATGTGGACGGGAGAAAGGAATTAATGTAGAGCCTCCATTCAAGGATGTCATCAACGAGAATCCTCAGTTTAGGAATGCACCAGCTACTGTGAGAGTAGAGAATATGTTTGAGCAGATAAAATCCAAACTCCCAAAGCCGCCTCTGTTCCTTCTTTGCATACTCGCTGAAAGGAAAAACTCTGATGTTTATGGCCCTTGGAAAAAAAAGAATCTTGTTGATCTTGGAATTGTGACTCAGTGCATTGCTCCCACCAGACTGAACGATCAGTATCTCACCAATGTTCTCCTGAAGATAAATGCCAAGCTTGGTGGATTGAATTCGTTGTTAGCTATGGAGCGCTCACCAGCAATGCCAAAAGTAACGCAAGTTCCTACCATCATTGTTGGGATGGATGTATCCCATGGTTCCCCTGGCCAGTCTGATATACCATCAATTGCTGCTGTTGTGAGCTCAAGACAATGGCCACTCATCTCAAAATATAAGGCATGTGTACGCACACAATCACGCAAAATGGAAATGATTGATAATCTCTTCAAACCCGTCAATGGCAAAGACGAAGGAATGTTCAGGGAACTCTTGTTAGACTTTTACTACAGTTCAGAGAATAGGAAACCAGAGCACATCATTATTTTCAGGGATGGTGTAAGCGAGTCTCAGTTCAATCAAGTTCTTAATATTGAATTGGATCAGATGATGCAGGCATGCAAGTTTCTTGATGATACGTGGCATCCGAAGTTTACAGTGATAGTTGCCCAGAAGAACCACCACACAAAGTTCTTCCAGTCTCGAGGCCCTGATAATGTTCCTCCAGGAACAATCATTGACAGCCAGATCTGTCACCCACGCAACTTTGATTTCTATCTCTGCGCCCATGCTGGCATGATTGGAACTACAAGGCCAACACATTACCATGTTCTGTATGACGAGATTGGGTTTGCCACAGACGACCTCCAAGAACTTGTGCATTCTCTGTCCTATGTCTACCAGAGGAGCACCACTGCGATCTCAGTCGTTGCACCTGTATGTTACGCTCATTTGGCAGCTGCACAGATGGGAACTGTGATGAAGTATGAAGAGTTGTCTGAGACTTCTTCGAGCCATGGAGGAATCACCACACCTGGAGCAGTCCCTGTGCCACCTATGCCGCAGCTGCACAATAATGTTTCAACCTCCATGTTCTTCTGTTGATGGAACATGGTCCAGTCCACACGATAGCTGAGTTTATATGCTTTTGATGGAGAACCAACGAACTTTTGTTTACTCTTCTCTGGGTTTGGTTCCTCTTTTGTTTTTCGTCGACCCTTTAACATTGAGGAGATACTCTTTATATTCTGTCGGTTTTTGTGGGCGCTGTTGGTTGATACTTTATTATGCTTAATCAGATTTGGTATTTTAAGGCATTGAGTTCTCTTCTTTTTTTAACGTCGATCTGATGTTGTGGCTGAATTACATATAG
CDS Sequence
Protein Sequence