Information report for AT5G21040
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0005737 — located in — cytoplasm
- GO:0005634 — located in — nucleus
- GO:0016036 — acts upstream of or within — cellular response to phosphate starvation
- GO:0019005 — part of — SCF ubiquitin ligase complex
- GO:0003674 — enables — molecular_function
Functional Keywords
Literature and News
- The F-box subunit of the SCF E3 complex is encoded by a diverse superfamily of genes in Arabidopsis. DOI: 10.1073/pnas.162339999 ; PMID: 12169662
- Armadillo repeat proteins: beyond the animal kingdom. DOI: 10.1016/s0962-8924(03)00167-3 ; PMID: 12946625
- The evolutionarily conserved Arabidopsis thaliana F-box protein AtFBP7 is required for efficient translation during temperature stress. DOI: 10.1016/j.gene.2006.11.016 ; PMID: 17240087
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- A comprehensive analysis of interaction and localization of Arabidopsis SKP1-like (ASK) and F-box (FBX) proteins. DOI: 10.1371/journal.pone.0050009 ; PMID: 23166809
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Differentiating phosphate-dependent and phosphate-independent systemic phosphate-starvation response networks in Arabidopsis thaliana through the application of phosphite. DOI: 10.1093/jxb/erv025 ; PMID: 25697796
Gene Resources
- UniProt: A0A178URR1
- EMBL: CACSHJ010000096, LUHQ01000005
- AlphaFoldDB: A0A178URR1
- EnsemblPlants: AT5G21040.1, AT5G21040.2, AT5G21040.3
- Gramene: AT5G21040.1, AT5G21040.2, AT5G21040.3
- KEGG: ath:AT5G21040
- Orthologous matrix: FRVWEHE
- ExpressionAtlas: AT5G21040
- InterPro: IPR001680, IPR001810, IPR015943
- PANTHER: PTHR19855, PTHR19855:SF19
- SUPFAM: SSF50978, SSF81383
- PROSITE: PS00678, PS50082, PS50181
- Gene3D: 1.20.1280.50, 2.130.10.10
- OrthoDB: A0A178URR1
- SWISS-MODEL: A0A178URR1
- Conserved Domain Database: cd00200, cd09917
Sequences
cDNA Sequence
- >AT5G21040.1
ACATTGTTTGATGCTTGGTTGGTTTTGGACCTTTTGGTTCTCCATCTTCAAAATCTCATCAATCCGATTAGAGAAATTAGGGCAACGTAATTTTGGCGAAAATCCTCTCTCTGTTACGAATAGATTGTTTTTGATTACTAAAGCTGGATTCGTCTCTGGTGCTGTAGATTTTCGAGATCCGGTCAGAGTCGTTCGTGAAAAGCTCCTTGTTTAAGTGTTACGGGCTACATCGGACGCTGACTGGCTTTTCATGGAATTTGAGTGCCAAGAGAGACTTGAAGCTGCGAACGATCAAAGAAGTGAGTCTGGTCTTTTGAATACCGATTTGAGAATAGGTAATGATGGGTCTGTTGAGATTCCAAATGTGAAGTTGTGTTGTCAGAAAAAGAAGGGAACTTTAGTGCCCAGTGGCTCGAAACAGTTACTCTCTGACAAGGATTTGTCTACTACCATTATTGATTTACCTCAGGCATTGATATCTGAGATTCTTAATTGCCTTGACCCAAAAGAGTTGGGTCTAGTGTCTTGTGTTTCAACTTATCTGCATAGGTTAGCATCTGAGCATCACGCTTGGAAGGAGTTCTATCGTGAGAGATGGGGACTCCCTGTAGTTTTCGGAGCTGCAAGTTCAGGGCTTTCTGATGAGAGATCATGGAAAGATCTGTTTGTTGAAAGGGAATTTAGGAGTAGGACCTTTTTAGGACGTTATAGTATTGATACTCTGTATGGTCACACTGAAGCAGTCCGGACTGTTTTTCTCTTAGCTTCTGCCAAGCTCGTTTTCACTTCTGGATATGATTCCATTGTTCGGATGTGGGACATGGAAGAAGGCTTGTCTATTGCGGCATCTAAACCTCTCGGTTGTACGATTAGGGCACTTGCTGCTGATACAAAGCTGTTGGTAGCTGGCGGTACTGATGGATTCATTCATTGCTGGAAATCACTGGATGGTCTCCGGAACCTGTTTGATCTCACAGGTTTTCAGAAAGAGAAGACTGAGTTTCGGCTATGGGGACATGAGGGTCCTATTACATCTCTTGCCCTGGACATGACAAGTATCTTTAGCGGTTCATGGGATATGTCTGTTCGTATATGGGATCGATCTTCAATGAAGTGTGTCAAAACCTTGAGGCATAGTGATTGGGTTTGGGGACTTGCACCTCATGAAACCACCCTCGCTAGCACGTCAGGTTCTGATGTATATATTTGGGACGTTAGCAGTGAGACTCCATTGGCGATCATCCCTGATGCTCATGAGGGTACCACTTACTCTTTGGCAAGAAGCCATACTGGGGATTTCCTGTTTACTGGTGGAGAAGATGGAGGGATTAAAATGTTTGAGATCAGAAGATACGGTAGTGAAACAAGCGTTGTACTTATATCTCAATGGATGCCTCACACTAGTCCTGTCTACTCTCTTTCTTTTGAGTTTCCTTGGCTTGTCTCAGCATCCGGTGACGGTAAACTCGCACTTATCGACGTTAGGAAACTGTTAAAAACTAACCGTTGTGCCTATTCCAAAAGGATTTCTTCGAGTACTGTGGAACCGCCACAACGAATGCTGCACGGGTTCGGGTCAAACTTGTTCTCTGTGGACGTGGGTTATGACCGTATAGTGTGTGGAGGTGAAGAAGGCACAGTCCGGATATGGAACTTCACACAAGCATTGGAGATAGAGCGAAGGACCCGAGCTCTGAAAGGAATGAGGCATGAGAATAGGATGAGACGAAGGAGAATGCAAATGGAGATGAACGCAAAGAATGGAAGGCCTGACCAATGCTCCATTGCTGCTCATAAGAACCCCATCAATGGAGAAAGGAACCGAGCCTGGCATAGTAAACGAAGAGCAAGCGGGAAGGCGAAGGCCTAAGCGATAAGATTGGATTTATCTTTAATACATTTAGTAAAGCAATTTTATAACCTTGACACATGTTGGCTTTAACTTTTAAGCTATCAGAGTTGGGTCTTTATGATTGGTGGAAAATGAGAAAATTGGCTTTTAGTTCATATATTTTGGAAGCTTTTAGTATGAAAAAATGCAAGAGATTCCTCGAAGGTTCACTAACTTCTAACTGAATTTCAAAATCTTACAATACAAC - >AT5G21040.3
ACATTGTTTGATGCTTGGTTGGTTTTGGACCTTTTGGTTCTCCATCTTCAAAATCTCATCAATCCGATTAGAGAAATTAGGGCAACGTAATTTTGGCGAAAATCCTCTCTCTGTTACGAATAGATTGTTTTTGATTACTAAAGCTGGATTCGTCTCTGGTGCTGTAGATTTTCGAGATCCGGTCAGAGTCGTTCGTGAAAAGCTCCTTGTTTAAGTGTTACGGGCTACATCGGACGCTGACTGGCTTTTCATGGAATTTGAGTGCCAAGAGAGACTTGAAGCTGCGAACGATCAAAGAAGTGAGTCTGGTCTTTTGAATACCGATTTGAGAATAGGTAATGATGGGTCTGTTGAGATTCCAAATGTGAAGTTGTGTTGTCAGAAAAAGAAGGGAACTTTAGTGCCCAGTGGCTCGAAACAGTTACTCTCTGACAAGGATTTGTCTACTACCATTATTGATTTACCTCAGGCATTGATATCTGAGATTCTTAATTGCCTTGACCCAAAAGAGTTGGGTCTAGTGTCTTGTGTTTCAACTTATCTGCATAGGTTAGCATCTGAGCATCACGCTTGGAAGGAGTTCTATCGTGAGAGATGGGGACTCCCTGTAGTTTTCGGAGCTGCAAGTTCAGGGCTTTCTGATGAGAGATCATGGAAAGATCTGTTTGTTGAAAGGGAATTTAGGAGTAGGACCTTTTTAGGACGTTATAGTATTGATACTCTGTATGGTCACACTGAAGCAGTCCGGACTGTTTTTCTCTTAGCTTCTGCCAAGCTCGTTTTCACTTCTGGATATGATTCCATTGTTCGGATGTGGGACATGGAAGAAGGCTTGTCTATTGCGGCATCTAAACCTCTCGGTTGTACGATTAGGGCACTTGCTGCTGATACAAAGCTGTTGGTAGCTGGCGGTACTGATGGATTCATTCATTGCTGGAAATCACTGGATGGTCTCCGGAACCTGTTTGATCTCACAGGTTTTCAGAAAGAGAAGACTGAGTTTCGGCTATGGGGACATGAGGGTCCTATTACATCTCTTGCCCTGGACATGACAAGTATCTTTAGCGGTTCATGGGATATGTCTGTTCGTATATGGGATCGATCTTCAATGAAGTGTGTCAAAACCTTGAGGCATAGTGATTGGGTTTGGGGACTTGCACCTCATGAAACCACCCTCGCTAGCACGTCAGGTTCTGATGTATATATTTGGGACGTTAGCAGTGAGACTCCATTGGCGATCATCCCTGATGCTCATGAGGGTACCACTTACTCTTTGGCAAGAAGCCATACTGGGGATTTCCTGTTTACTGGTGGAGAAGATGGAGGGATTAAAATGTTTGAGATCAGAAGATACGGTAGTGAAACAAGCGTTGTACTTATATCTCAATGGATGCCTCACACTAGTCCTGTCTACTCTCTTTCTTTTGAGTTTCCTTGGCTTGTCTCAGCATCCGGTGACGGTAAACTCGCACTTATCGACGTTAGGAAACTGTTAAAAACTAACCGTTGTGCCTATTCCAAAAGGATTTCTTCGAGTACTGTGGAACCGCCACAACGAATGCTGCACGGGTTCGGGTCAAACTTGTTCTCTGTGGACGTGGGTTATGACCGTATAGTGTGTGGAGGTGAAGAAGGCACAGTCCGGATATGGAACTTCACACAAGCATTGGAGATAGAGCGAAGGACCCGAGCTCTGAAAGGAATGAGGCATGAGAATAGGATGAGACGAAGGAGAATGCAAATGGAGATGAACGCAAAGAATGGAAGGCCTGACCAATGCTCCATTGCTGCTCATAAGAACCCCATCAATGGAGAAAGGAACCGAGCCTGGCATAGTAAACGAAGAGCAAGCGGGAAGGCGAAGGCCTAAGCGATAAGATTGGATTTATCTTTAATACATTTAGTAAAGCAATTTTATAACCTTGACACATGTTGGCTTTAACTTTTAAGCTATCAGAGTTGGGTCTTTATGATTGGTGGAAAATGAGAAAATTGGCTTTTAGTTCATATATTTTGGAAGCTTTTAGTATGAAAAAATGCAAGAGATTCCTCGAAGGTTCACTAACTTCTAACTGAATTTCAAAATCTTACAATACAAC - >AT5G21040.2
ACATTGTTTGATGCTTGGTTGGTTTTGGACCTTTTGGTTCTCCATCTTCAAAATCTCATCAATCCGATTAGAGAAATTAGGGCAACGTAATTTTGGCGAAAATCCTCTCTCTGTTACGAATAGATTGTTTTTGATTACTAAAGCTGGATTCGTCTCTGGTGCTGTAGATTTTCGAGATCCGGTCAGAGTCGTTCGTGAAAAGCTCCTTGTTTAAGTGTTACGGGCTACATCGGACGCTGACTGGCTTTTCATGGAATTTGAGTGCCAAGAGAGACTTGAAGCTGCGAACGATCAAAGAAGTGAGTCTGGTCTTTTGAATACCGATTTGAGAATAGGTAATGATGGGTCTGTTGAGATTCCAAATGTGAAGTTGTGTTGTCAGAAAAAGAAGGGAACTTTAGTGCCCAGTGGCTCGAAACAGTTACTCTCTGACAAGGATTTGTCTACTACCATTATTGATTTACCTCAGGCATTGATATCTGAGATTCTTAATTGCCTTGACCCAAAAGAGTTGGGTCTAGTGTCTTGTGTTTCAACTTATCTGCATAGGTTAGCATCTGAGCATCACGCTTGGAAGGAGTTCTATCGTGAGAGATGGGGACTCCCTGTAGTTTTCGGAGCTGCAAGTTCAGGGCTTTCTGATGAGAGATCATGGAAAGATCTGTTTGTTGAAAGGGAATTTAGGAGTAGGACCTTTTTAGGACGTTATAGTATTGATACTCTGTATGGTCACACTGAAGCAGTCCGGACTGTTTTTCTCTTAGCTTCTGCCAAGCTCGTTTTCACTTCTGGATATGATTCCATTGTTCGGATGTGGGACATGGAAGAAGGCTTGTCTATTGCGGCATCTAAACCTCTCGGTTGTACGATTAGGGCACTTGCTGCTGATACAAAGCTGTTGGTAGCTGGCGGTACTGATGGATTCATTCATTGCTGGAAATCACTGGATGGTCTCCGGAACCTGTTTGATCTCACAGGTTTTCAGAAAGAGAAGACTGAGTTTCGGCTATGGGGACATGAGGGTCCTATTACATCTCTTGCCCTGGACATGACAAGTATCTTTAGCGGTTCATGGGATATGTCTGTTCGTATATGGGATCGATCTTCAATGAAGTGTGTCAAAACCTTGAGGCATAGTGATTGGGTTTGGGGACTTGCACCTCATGAAACCACCCTCGCTAGCACGTCAGGTTCTGATGTATATATTTGGGACGTTAGCAGTGAGACTCCATTGGCGATCATCCCTGATGCTCATGAGGGTACCACTTACTCTTTGGCAAGAAGCCATACTGGGGATTTCCTGTTTACTGGTGGAGAAGATGGAGGGATTAAAATGTTTGAGATCAGAAGATACGGTAGTGAAACAAGCGTTGTACTTATATCTCAATGGATGCCTCACACTAGTCCTGTCTACTCTCTTTCTTTTGAGTTTCCTTGGCTTGTCTCAGCATCCGGTGACGGTAAACTCGCACTTATCGACGTTAGGAAACTGTTAAAAACTAACCGTTGTGCCTATTCCAAAAGGATTTCTTCGAGTACTGTGGAACCGCCACAACGAATGCTGCACGGGTTCGGGTCAAACTTGTTCTCTGTGGACGTGGGTTATGACCGTATAGTGTGTGGAGGTGAAGAAGGCACAGTCCGGATATGGAACTTCACACAAGCATTGGAGATAGAGCGAAGGACCCGAGCTCTGAAAGGAATGAGGCATGAGAATAGGATGAGACGAAGGAGAATGCAAATGGAGATGAACGCAAAGAATGGAAGGCCTGACCAATGCTCCATTGCTGCTCATAAGAACCCCATCAATGGAGAAAGGAACCGAGCCTGGCATAGTAAACGAAGAGCAAGCGGGAAGGCGAAGGCCTAAGCGATAAGATTGGATTTATCTTTAATACATTTAGTAAAGCAATTTTATAACCTTGACACATGTTGGCTTTAACTTTTAAGCTATCAGAGTTGGGTCTTTATGATTGGTGGAAAATGAGAAAATTGGCTTTTAGTTCATATATTTTGGAAGCTTTTAGTATGAAAAAATGCAAGAGATTCCTCGAAGGTTCACTAACTTCTAACTGAATTTCAAAATCTTACAATACAAC
CDS Sequence
Protein Sequence