Information report for AT5G20890
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- A reference map of the Arabidopsis thaliana mature pollen proteome. DOI: 10.1016/j.bbrc.2005.09.185 ; PMID: 16242667
- Proteomic analysis of different mutant genotypes of Arabidopsis led to the identification of 11 proteins correlating with adventitious root development. DOI: 10.1104/pp.105.067868 ; PMID: 16377752
- Proteomic analysis and extensive protein identification from dry, germinating Arabidopsis seeds and young seedlings. DOI: 10.5483/bmbrep.2005.38.6.650 ; PMID: 16336779
- Proteomic investigation of the effect of salicylic acid on Arabidopsis seed germination and establishment of early defense mechanisms. DOI: 10.1104/pp.106.082057 ; PMID: 16679420
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- Protein and metabolite composition of Arabidopsis stress granules. DOI: 10.1111/nph.15690 ; PMID: 30664249
- Functional characterization of chaperonin containing T-complex polypeptide-1 and its conserved and novel substrates in Arabidopsis. DOI: 10.1093/jxb/erz099 ; PMID: 30825377
- Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. DOI: 10.1038/s41477-019-0378-z ; PMID: 30833711
- A reference map of the Arabidopsis thaliana mature pollen proteome. DOI: 10.1016/j.bbrc.2005.09.185 ; PMID: 16242667
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Proteomic analysis of glycosylphosphatidylinositol-anchored membrane proteins. DOI: 10.1074/mcp.M300079-MCP200 ; PMID: 14517339
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178UL10
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A178UL10
- EnsemblPlants: AT5G20890.1
- Gramene: AT5G20890.1
- KEGG: ath:AT5G20890
- Orthologous matrix: CAEMVMS
- ExpressionAtlas: AT5G20890
- InterPro: IPR002194, IPR002423, IPR012716
- PANTHER: PTHR11353
- SUPFAM: SSF48592, SSF52029, SSF54849
- PROSITE: PS00750, PS00751, PS00995
- Gene3D: 1.10.560.10, 3.30.260.10, 3.50.7.10
- OrthoDB: A0A178UL10
- SWISS-MODEL: A0A178UL10
- Conserved Domain Database: cd03336
Sequences
cDNA Sequence
- >AT5G20890.1
GAAGGGCGCATAAGAAATCTGGGAAATACGAGGGTAGTTTGGTCTTTACGAGTTTCATTTAGGGTTCCGAAAGATCTGGGTTTTGGCTCTCTCCTCTCATTTTCTACTCTTCTTCAAAAGCACACTCAATATTTCGAGATCCTCTCGGCTTGTTCGTTCTTCGTGAACGATCCCATCTATTGTTTCTCGCTAGTCTCAGATTCGACTAACTTGGATATCTCCGATACTGAAGAAGCCTCCTTCTTCTTTTTCCGCTCTTCCCGATGCCGATCGATAAGATCTTCAAAGATGATGCTAGTGAAGAGAAGGGAGAACGTGCGAGGATGGCATCATTTGTTGGTGCAATGGCTATCAGTGATCTGGTTAAGTCTACTTTAGGGCCAAAGGGCATGGATAAAATCTTGCAATCTACTGGTAGAGGTCATGCGGTCACTGTTACTAACGATGGTGCTACTATTCTCAAGTCACTTCACATAGACAACCCTGCAGCTAAAGTTCTTGTTGACATCTCGAAAGTTCAAGATGATGAGGTTGGTGATGGAACTACCTCTGTTGTTGTCTTGGCCGGCGAGCTTCTGAGGGAAGCAGAAAAGCTTGTGGCTTCTAAGATTCACCCTATGACCATCATAGCAGGTTACAGAATGGCTTCGGAATGTGCTCGTAATGCTTTACTGAAAAGAGTCATTGATAACAAGGACAATGCAGAGAAGTTTAGGTCAGACTTGTTGAAGATTGCGATGACTACTTTATGTTCCAAAATTCTCTCACAGGACAAGGAACATTTTGCAGAAATGGCCGTGGATGCTGTTTTCAGGCTAAAGGGAAGCACAAACTTGGAAGCTATTCAGATCATCAAAAAACCTGGAGGGTCTCTGAAGGATTCGTTTTTGGATGAAGGGTTTATTCTTGACAAGAAAATAGGAATTGGGCAGCCTAAGCGCATAGAGAATGCAAATATCTTAGTAGCTAATACTGCTATGGATACCGATAAAGTGAAGATTTACGGTGCACGTGTCCGTGTGGATTCCATGACCAAGGTTGCTGAGATTGAAGGGGCTGAGAAGGAAAAAATGAAAGACAAGGTGAAGAAGATCATAGGCCACGGAATCAACTGCTTTGTTAACAGGCAGTTGATCTACAATTTCCCTGAGGAACTCTTTGCTGATGCTGGTATACTTGCTATTGAGCATGCTGACTTTGAGGGAATAGAGCGTCTTGGTTTGGTTACTGGTGGTGAAATTGCTTCGACCTTTGACAACCCAGAGTCTGTTAAGCTTGGGCATTGCAAGCTTATAGAAGAAATCATGATTGGTGAAGACAAGTTGATTCATTTCTCTGGTTGTGAAATGGGCCAGGCTTGTTCAATTGTCCTAAGAGGGGCCAGTCACCATGTCCTAGATGAGGCTGAAAGATCACTCCATGATGCCTTATGTGTACTCTCTCAAACAGTGAATGATACTAGAGTTTTGCTTGGAGGTGGATGGCCAGAGATGGTGATGGCAAAGGAAGTAGATGAGCTTGCAAGGAAAACTGCTGGCAAAAAATCTCATGCCATTGAAGCTTTCTCACGTGCTCTAGTTGCTATACCGACAACAATCGCTGACAACGCTGGTTTAGACAGTGCCGAATTGGTTGCTCAGCTTCGTGCAGAGCACCACACTGAAGGGTGTAACGCTGGGATCGACGTCATCACTGGAGCTGTAGGAGATATGGAAGAGAGAGGAATCTATGAAGCATTCAAAGTGAAGCAAGCGGTTCTGCTTTCAGCCACAGAAGCATCTGAGATGATATTGCGAGTGGATGAAATCATTACATGTGCTCCTAGGAGGAGAGAAGACAGGATGTGAAAAACTCAACACAAACACATGAACGTGGTGGGAGCCTAGAGATTCCATGATTGTGTTTTCGATTTGGATCAGAATACAACTTTTCTAATATGTTTAATGTTTTGCTCCTCCTTAGAACTCATCTTTTTGTTTTGTTTCCTTTTAATCTTGTTTTGAGTTTGAATTTAGACGTTTGAAAAAAGTGTTAGCTCCAAAGTTTTTAATTTGTTTGGTTGTGACGTTGTGTCTTCTGTTTCTACCTGCATCCCATTTTGGCATTTTCACTGAGATGGTTCTGATATAATAGGGATGTGTGGAAAAGAAAAACGAAGTACCAAAACGTAAGTTATTTGGATACCAAAGGAAAACTTGAAGGATCCCATTTCTG
CDS Sequence
Protein Sequence